RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 NDUFA4O00483 81 aa11.95□□□□□ -0.5
LSM6-201ENST00000296581 BUB3O43684 328 aa11.95□□□□□ -0.5
LSM6-201ENST00000296581 CD99P14209 185 aa11.95□□□□□ -0.5
LSM6-201ENST00000296581 SLC35B1P78383 322 aa11.95□□□□□ -0.5
LSM6-201ENST00000296581 CENPWQ5EE01 88 aa11.95□□□□□ -0.5
LSM6-201ENST00000296581 C10orf99Q6UWK7 81 aa11.95□□□□□ -0.5
LSM6-201ENST00000296581 IGF2BP2-AS1Q96M15 143 aa11.95□□□□□ -0.5
LSM6-201ENST00000296581 C17orf77Q96MU5 243 aa11.95□□□□□ -0.5
LSM6-201ENST00000296581 U3KQE9 123 aa11.95□□□□□ -0.5
LSM6-201ENST00000296581 GNG4P50150 75 aa11.95□□□□□ -0.5
LSM6-201ENST00000296581 KRTDAPP60985 99 aa11.95□□□□□ -0.5
LSM6-201ENST00000296581 GNG5P63218 68 aa11.95□□□□□ -0.5
LSM6-201ENST00000296581 FOXE3Q13461 319 aa11.95□□□□□ -0.5
LSM6-201ENST00000296581 SIGLEC15Q6ZMC9 328 aa11.95□□□□□ -0.5
LSM6-201ENST00000296581 OR8I2Q8N0Y5 310 aa11.95□□□□□ -0.5
LSM6-201ENST00000296581 METTL26Q96S19 204 aa11.95□□□□□ -0.5
LSM6-201ENST00000296581 MYO9AB2RTY4 2548 aa11.95□□□□□ -0.5
LSM6-201ENST00000296581 DNAJC9-AS1A6NH13 148 aa11.94□□□□□ -0.5
LSM6-201ENST00000296581 ELANEP08246 267 aa11.94□□□□□ -0.5
LSM6-201ENST00000296581 MYOZ3Q8TDC0 251 aa11.94□□□□□ -0.5
LSM6-201ENST00000296581 SAMD10Q9BYL1 202 aa11.94□□□□□ -0.5
LSM6-201ENST00000296581 KLF12Q9Y4X4 402 aa11.94□□□□□ -0.5
LSM6-201ENST00000296581 SLC17A3O00476 420 aa11.94□□□□□ -0.5
LSM6-201ENST00000296581 EXOC3-AS1Q8N2X6 119 aa11.94□□□□□ -0.5
LSM6-201ENST00000296581 RNF152Q8N8N0 203 aa11.94□□□□□ -0.5
LSM6-201ENST00000296581 LINC00479Q96M42 142 aa11.94□□□□□ -0.5
LSM6-201ENST00000296581 GPR82Q96P67 336 aa11.94□□□□□ -0.5
LSM6-201ENST00000296581 SERTAD4Q9NUC0 356 aa11.94□□□□□ -0.5
LSM6-201ENST00000296581 SMAD5-AS1Q9Y6J3 95 aa11.94□□□□□ -0.5
LSM6-201ENST00000296581 K7EN84 100 aa11.93□□□□□ -0.5
LSM6-201ENST00000296581 TCRAP04437 139 aa11.93□□□□□ -0.5
LSM6-201ENST00000296581 ERASQ7Z444 233 aa11.93□□□□□ -0.5
LSM6-201ENST00000296581 NIT1Q86X76 327 aa11.93□□□□□ -0.5
LSM6-201ENST00000296581 KLHDC1Q8N7A1 406 aa11.93□□□□□ -0.5
LSM6-201ENST00000296581 IGLV2-8P01709 118 aa11.93□□□□□ -0.5
LSM6-201ENST00000296581 PEF1Q9UBV8 284 aaKnown RBP11.93□□□□□ -0.5
LSM6-201ENST00000296581 A0A087X0K7 114 aa11.92□□□□□ -0.5
LSM6-201ENST00000296581 ZNF253O75346 499 aa11.92□□□□□ -0.5
LSM6-201ENST00000296581 SCGB2A2Q13296 93 aa11.92□□□□□ -0.5
LSM6-201ENST00000296581 UNQ9165/PRO28630Q6UXU0 137 aa11.92□□□□□ -0.5
LSM6-201ENST00000296581 SFRP2Q96HF1 295 aa11.92□□□□□ -0.5
LSM6-201ENST00000296581 ESM1Q9NQ30 184 aa11.92□□□□□ -0.5
LSM6-201ENST00000296581 ISLRO14498 428 aa11.91□□□□□ -0.5
LSM6-201ENST00000296581 APOHP02749 345 aaPredicted RBP11.91□□□□□ -0.5
LSM6-201ENST00000296581 ZNF207O43670 478 aaKnown RBP11.91□□□□□ -0.5
LSM6-201ENST00000296581 CRISP2P16562 243 aa11.91□□□□□ -0.5
LSM6-201ENST00000296581 PSG9Q00887 426 aa11.91□□□□□ -0.5
LSM6-201ENST00000296581 FAM181BA6NEQ2 426 aa11.9□□□□□ -0.5
LSM6-201ENST00000296581 FMC1Q96HJ9 113 aa11.9□□□□□ -0.5
LSM6-201ENST00000296581 SAP30O75446 220 aa11.9□□□□□ -0.5
LSM6-201ENST00000296581 UBE2G1P62253 170 aa11.9□□□□□ -0.5
LSM6-201ENST00000296581 TCF24Q7RTU0 167 aa11.9□□□□□ -0.5
LSM6-201ENST00000296581 SMR3AQ99954 134 aa11.9□□□□□ -0.5
LSM6-201ENST00000296581 AAMDCQ9H7C9 122 aa11.9□□□□□ -0.5
LSM6-201ENST00000296581 GAGE12BA1L429 117 aa11.89□□□□□ -0.51
LSM6-201ENST00000296581 Q6ZSV7 163 aa11.89□□□□□ -0.51
LSM6-201ENST00000296581 BAGE3Q86Y29 109 aa11.89□□□□□ -0.51
LSM6-201ENST00000296581 BAGE2Q86Y30 109 aa11.89□□□□□ -0.51
LSM6-201ENST00000296581 OR10G8Q8NGN5 311 aa11.89□□□□□ -0.51
LSM6-201ENST00000296581 UBE2E2Q96LR5 201 aa11.89□□□□□ -0.51
LSM6-201ENST00000296581 ANK3Q12955 4377 aaKnown RBP11.89□□□□□ -0.51
LSM6-201ENST00000296581 IGHV3-66A0A0C4DH42 116 aa11.89□□□□□ -0.51
LSM6-201ENST00000296581 TRBV6-1A0A0K0K1D8 114 aa11.89□□□□□ -0.51
LSM6-201ENST00000296581 F2Z2F3 143 aa11.89□□□□□ -0.51
LSM6-201ENST00000296581 TAX1BP3O14907 124 aa11.89□□□□□ -0.51
LSM6-201ENST00000296581 GPX1P07203 203 aa11.89□□□□□ -0.51
LSM6-201ENST00000296581 LGALS1P09382 135 aaKnown RBP11.89□□□□□ -0.51
LSM6-201ENST00000296581 FOXL1Q12952 345 aa11.89□□□□□ -0.51
LSM6-201ENST00000296581 GPHB5Q86YW7 130 aa11.89□□□□□ -0.51
LSM6-201ENST00000296581 IGHV3OR16-13A0A075B7E8 117 aa11.88□□□□□ -0.51
LSM6-201ENST00000296581 IGHV3-74A0A0B4J1X5 117 aa11.88□□□□□ -0.51
LSM6-201ENST00000296581 LY6G6DO95868 133 aa11.88□□□□□ -0.51
LSM6-201ENST00000296581 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.88□□□□□ -0.51
LSM6-201ENST00000296581 GOLT1AQ6ZVE7 132 aa11.88□□□□□ -0.51
LSM6-201ENST00000296581 GLMPQ8WWB7 406 aa11.88□□□□□ -0.51
LSM6-201ENST00000296581 ZNF331Q9NQX6 463 aaPredicted RBP11.88□□□□□ -0.51
LSM6-201ENST00000296581 IGHV3-49A0A0A0MS15 119 aa11.88□□□□□ -0.51
LSM6-201ENST00000296581 ZNF785A8K8V0 405 aa11.88□□□□□ -0.51
LSM6-201ENST00000296581 LTAP01374 205 aa11.88□□□□□ -0.51
LSM6-201ENST00000296581 IGLV2-11P01706 119 aa11.88□□□□□ -0.51
LSM6-201ENST00000296581 M0R3E3 92 aa11.87□□□□□ -0.51
LSM6-201ENST00000296581 RNASE1P07998 156 aaKnown RBP11.87□□□□□ -0.51
LSM6-201ENST00000296581 SRD5A1P18405 259 aa11.87□□□□□ -0.51
LSM6-201ENST00000296581 AMMECR1LQ6DCA0 310 aa11.87□□□□□ -0.51
LSM6-201ENST00000296581 WDR73Q6P4I2 378 aa11.87□□□□□ -0.51
LSM6-201ENST00000296581 TMEM75Q8N9X5 138 aa11.87□□□□□ -0.51
LSM6-201ENST00000296581 MLST8Q9BVC4 326 aa11.87□□□□□ -0.51
LSM6-201ENST00000296581 NRN1Q9NPD7 142 aa11.87□□□□□ -0.51
LSM6-201ENST00000296581 OSTCQ9NRP0 149 aa11.87□□□□□ -0.51
LSM6-201ENST00000296581 K7EMT4 169 aa11.86□□□□□ -0.51
LSM6-201ENST00000296581 Q0VG73 95 aa11.86□□□□□ -0.51
LSM6-201ENST00000296581 FAM106AQ4KMX7 169 aa11.86□□□□□ -0.51
LSM6-201ENST00000296581 SAMD13Q5VXD3 122 aa11.86□□□□□ -0.51
LSM6-201ENST00000296581 Q86TA4 180 aa11.86□□□□□ -0.51
LSM6-201ENST00000296581 NHLRC2Q8NBF2 726 aa11.86□□□□□ -0.51
LSM6-201ENST00000296581 SGK494Q96LW2 274 aa11.86□□□□□ -0.51
LSM6-201ENST00000296581 SMPXQ9UHP9 88 aa11.86□□□□□ -0.51
LSM6-201ENST00000296581 NOTCH2Q04721 2471 aa11.86□□□□□ -0.51
LSM6-201ENST00000296581 SERTM2A0A1B0GWG4 89 aa11.86□□□□□ -0.51
LSM6-201ENST00000296581 MGST1P10620 155 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms