RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 TCTEX1D4Q5JR98 221 aa13.68□□□□□ -0.22
CDCP1-201ENST00000296129 ZC2HC1BQ5TFG8 222 aa13.68□□□□□ -0.22
CDCP1-201ENST00000296129 C8orf31Q8N9H6 132 aa13.68□□□□□ -0.22
CDCP1-201ENST00000296129 FAM104BQ5XKR9 115 aa13.67□□□□□ -0.22
CDCP1-201ENST00000296129 TRAV12-2A0A075B6T6 113 aa13.67□□□□□ -0.22
CDCP1-201ENST00000296129 PCP4P48539 62 aa13.67□□□□□ -0.22
CDCP1-201ENST00000296129 CFHR3Q02985 330 aa13.67□□□□□ -0.22
CDCP1-201ENST00000296129 S100A7L2Q5SY68 101 aa13.67□□□□□ -0.22
CDCP1-201ENST00000296129 Q71RC1 249 aaPredicted RBP13.67□□□□□ -0.22
CDCP1-201ENST00000296129 LTBP2Q14767 1821 aa13.67□□□□□ -0.22
CDCP1-201ENST00000296129 C3orf56Q8N813 242 aa13.67□□□□□ -0.22
CDCP1-201ENST00000296129 IL15RAQ13261 267 aa13.66□□□□□ -0.22
CDCP1-201ENST00000296129 IGHV3-16A0A0C4DH30 117 aa13.66□□□□□ -0.22
CDCP1-201ENST00000296129 SMIM27A0A1W2PRY6 76 aa13.66□□□□□ -0.22
CDCP1-201ENST00000296129 TRAV26-2A0A0B4J265 109 aa13.66□□□□□ -0.22
CDCP1-201ENST00000296129 ANXA2RQ3ZCQ2 193 aa13.66□□□□□ -0.22
CDCP1-201ENST00000296129 SPXQ9BT56 116 aa13.66□□□□□ -0.22
CDCP1-201ENST00000296129 AKAP6Q13023 2319 aa13.66□□□□□ -0.22
CDCP1-201ENST00000296129 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.66□□□□□ -0.22
CDCP1-201ENST00000296129 ZNF664Q8N3J9 261 aa13.66□□□□□ -0.22
CDCP1-201ENST00000296129 ZC2HC1AQ96GY0 325 aa13.66□□□□□ -0.22
CDCP1-201ENST00000296129 ROS1P08922 2347 aa13.65□□□□□ -0.22
CDCP1-201ENST00000296129 MPV17L2Q567V2 206 aa13.65□□□□□ -0.22
CDCP1-201ENST00000296129 C10orf91Q5T1B1 145 aa13.65□□□□□ -0.22
CDCP1-201ENST00000296129 TIMM21Q9BVV7 248 aa13.65□□□□□ -0.22
CDCP1-201ENST00000296129 TP53TG1Q9Y2A0 90 aa13.65□□□□□ -0.22
CDCP1-201ENST00000296129 IGHV1OR15-1A0A075B7D0 117 aa13.65□□□□□ -0.22
CDCP1-201ENST00000296129 IGLC7A0M8Q6 106 aa13.65□□□□□ -0.22
CDCP1-201ENST00000296129 PAX4O43316 350 aa13.65□□□□□ -0.23
CDCP1-201ENST00000296129 FAM231DQ6ZW35 169 aa13.65□□□□□ -0.23
CDCP1-201ENST00000296129 DIDO1Q9BTC0 2240 aaKnown RBP13.64□□□□□ -0.23
CDCP1-201ENST00000296129 TDGF1P3P51864 188 aa13.64□□□□□ -0.23
CDCP1-201ENST00000296129 PRR20EP86478 221 aa13.64□□□□□ -0.23
CDCP1-201ENST00000296129 PRR20CP86479 221 aa13.64□□□□□ -0.23
CDCP1-201ENST00000296129 PRR20DP86480 221 aa13.64□□□□□ -0.23
CDCP1-201ENST00000296129 PRR20BP86481 221 aa13.64□□□□□ -0.23
CDCP1-201ENST00000296129 PRR20AP86496 221 aa13.64□□□□□ -0.23
CDCP1-201ENST00000296129 MRPL51Q4U2R6 128 aaKnown RBP13.64□□□□□ -0.23
CDCP1-201ENST00000296129 SLAQ13239 276 aa13.64□□□□□ -0.23
CDCP1-201ENST00000296129 IGHV7-4-1A0A0J9YVY3 117 aa13.64□□□□□ -0.23
CDCP1-201ENST00000296129 A8MWV9 139 aa13.64□□□□□ -0.23
CDCP1-201ENST00000296129 Q6ZSR3 168 aa13.64□□□□□ -0.23
CDCP1-201ENST00000296129 STPG4Q8N801 248 aa13.64□□□□□ -0.23
CDCP1-201ENST00000296129 COL4A3Q01955 1670 aa13.64□□□□□ -0.23
CDCP1-201ENST00000296129 GAGE13Q4V321 117 aa13.63□□□□□ -0.23
CDCP1-201ENST00000296129 ZNF491Q8N8L2 437 aa13.63□□□□□ -0.23
CDCP1-201ENST00000296129 GAGE12JA6NER3 117 aa13.63□□□□□ -0.23
CDCP1-201ENST00000296129 GAGE1Q13065 139 aa13.63□□□□□ -0.23
CDCP1-201ENST00000296129 GAGE4Q13068 117 aa13.63□□□□□ -0.23
CDCP1-201ENST00000296129 GAGE5Q13069 117 aa13.63□□□□□ -0.23
CDCP1-201ENST00000296129 Q8N8P6 123 aa13.63□□□□□ -0.23
CDCP1-201ENST00000296129 PKDREJQ9NTG1 2253 aa13.63□□□□□ -0.23
CDCP1-201ENST00000296129 LY6G5BQ8NDX9 201 aa13.63□□□□□ -0.23
CDCP1-201ENST00000296129 C17orf77Q96MU5 243 aa13.63□□□□□ -0.23
CDCP1-201ENST00000296129 GHRHP01286 108 aa13.63□□□□□ -0.23
CDCP1-201ENST00000296129 CDKN1BP46527 198 aa13.62□□□□□ -0.23
CDCP1-201ENST00000296129 DEFB112Q30KQ8 113 aa13.62□□□□□ -0.23
CDCP1-201ENST00000296129 C6orf226Q5I0X4 101 aa13.62□□□□□ -0.23
CDCP1-201ENST00000296129 ESDP10768 282 aa13.62□□□□□ -0.23
CDCP1-201ENST00000296129 GATD1Q8NB37 220 aa13.62□□□□□ -0.23
CDCP1-201ENST00000296129 ATXN8Q156A1 80 aa13.62□□□□□ -0.23
CDCP1-201ENST00000296129 TRAV8-4A0A0B4J246 113 aa13.62□□□□□ -0.23
CDCP1-201ENST00000296129 AZU1P20160 251 aa13.62□□□□□ -0.23
CDCP1-201ENST00000296129 POLR3KQ9Y2Y1 108 aaPredicted RBP13.62□□□□□ -0.23
CDCP1-201ENST00000296129 MTURNQ8N3F0 131 aa13.61□□□□□ -0.23
CDCP1-201ENST00000296129 OR11H6Q8NGC7 330 aa13.61□□□□□ -0.23
CDCP1-201ENST00000296129 CHAC1Q9BUX1 264 aa13.61□□□□□ -0.23
CDCP1-201ENST00000296129 CST9LQ9H4G1 147 aa13.61□□□□□ -0.23
CDCP1-201ENST00000296129 IGHV4-59P01825 116 aa13.61□□□□□ -0.23
CDCP1-201ENST00000296129 SPRY4Q9C004 299 aa13.61□□□□□ -0.23
CDCP1-201ENST00000296129 RHODO00212 210 aa13.61□□□□□ -0.23
CDCP1-201ENST00000296129 PRSS57Q6UWY2 283 aa13.61□□□□□ -0.23
CDCP1-201ENST00000296129 C11orf52Q96A22 123 aa13.61□□□□□ -0.23
CDCP1-201ENST00000296129 JPT2Q9H910 190 aa13.61□□□□□ -0.23
CDCP1-201ENST00000296129 MYMXA0A1B0GTQ4 84 aa13.6□□□□□ -0.23
CDCP1-201ENST00000296129 SS18Q15532 418 aa13.6□□□□□ -0.23
CDCP1-201ENST00000296129 C2orf66Q6UXQ4 117 aa13.6□□□□□ -0.23
CDCP1-201ENST00000296129 I3L3M4 83 aa13.6□□□□□ -0.23
CDCP1-201ENST00000296129 RITA1Q96K30 269 aa13.6□□□□□ -0.23
CDCP1-201ENST00000296129 USF3Q68DE3 2245 aa13.6□□□□□ -0.23
CDCP1-201ENST00000296129 HLA-DMBP28068 263 aa13.6□□□□□ -0.23
CDCP1-201ENST00000296129 VWC2Q2TAL6 325 aa13.6□□□□□ -0.23
CDCP1-201ENST00000296129 A8MWP6 167 aa13.59□□□□□ -0.23
CDCP1-201ENST00000296129 K7EN84 100 aa13.59□□□□□ -0.23
CDCP1-201ENST00000296129 KIR3DS1Q14943 382 aa13.59□□□□□ -0.23
CDCP1-201ENST00000296129 OBSL1O75147 1896 aa13.59□□□□□ -0.23
CDCP1-201ENST00000296129 CACNA1BQ00975 2339 aa13.59□□□□□ -0.23
CDCP1-201ENST00000296129 PRB1P04280 392 aa13.59□□□□□ -0.23
CDCP1-201ENST00000296129 ELANEP08246 267 aa13.59□□□□□ -0.23
CDCP1-201ENST00000296129 SEM1Q6ZVN7 128 aa13.59□□□□□ -0.23
CDCP1-201ENST00000296129 ADORA2A-AS1P86434 159 aa13.59□□□□□ -0.23
CDCP1-201ENST00000296129 H3BUA1 57 aa13.59□□□□□ -0.23
CDCP1-201ENST00000296129 LTAP01374 205 aa13.59□□□□□ -0.23
CDCP1-201ENST00000296129 SPTBN1Q01082 2364 aaKnown RBP13.59□□□□□ -0.23
CDCP1-201ENST00000296129 IGHV4-61A0A0C4DH41 118 aa13.59□□□□□ -0.23
CDCP1-201ENST00000296129 PRIMA1Q86XR5 153 aa13.59□□□□□ -0.23
CDCP1-201ENST00000296129 A0A1B0GV72 72 aa13.58□□□□□ -0.23
CDCP1-201ENST00000296129 IGHV1-24A0A0C4DH33 117 aa13.58□□□□□ -0.24
CDCP1-201ENST00000296129 NEGR1Q7Z3B1 354 aa13.58□□□□□ -0.24
CDCP1-201ENST00000296129 GAGE12BA1L429 117 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms