RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 SAPCD1Q5SSQ6 148 aa17.26■□□□□ 0.35
PTX3-201ENST00000295927 ZNF738Q8NE65 137 aa17.26■□□□□ 0.35
PTX3-201ENST00000295927 SMIM27A0A1W2PRY6 76 aa17.25■□□□□ 0.35
PTX3-201ENST00000295927 P01737 135 aa17.25■□□□□ 0.35
PTX3-201ENST00000295927 TYMSP04818 313 aa17.25■□□□□ 0.35
PTX3-201ENST00000295927 ADAMTSL5Q6ZMM2 481 aa17.25■□□□□ 0.35
PTX3-201ENST00000295927 RAX2Q96IS3 184 aa17.25■□□□□ 0.35
PTX3-201ENST00000295927 SRD5A3Q9H8P0 318 aa17.25■□□□□ 0.35
PTX3-201ENST00000295927 TSSC4Q9Y5U2 329 aaPredicted RBP17.25■□□□□ 0.35
PTX3-201ENST00000295927 TRAV9-1A0A075B6T8 112 aa17.25■□□□□ 0.35
PTX3-201ENST00000295927 CRIP1P50238 77 aa17.25■□□□□ 0.35
PTX3-201ENST00000295927 TCL1AP56279 114 aa17.25■□□□□ 0.35
PTX3-201ENST00000295927 PROK1P58294 105 aa17.25■□□□□ 0.35
PTX3-201ENST00000295927 RAB5BP61020 215 aa17.25■□□□□ 0.35
PTX3-201ENST00000295927 DLX4Q92988 240 aaPredicted RBP17.25■□□□□ 0.35
PTX3-201ENST00000295927 BTF3L4Q96K17 158 aa17.25■□□□□ 0.35
PTX3-201ENST00000295927 GPR61Q9BZJ8 451 aa17.25■□□□□ 0.35
PTX3-201ENST00000295927 AGPAT4-IT1Q9H0P7 198 aa17.25■□□□□ 0.35
PTX3-201ENST00000295927 RPP21Q9H633 154 aaKnown RBP17.25■□□□□ 0.35
PTX3-201ENST00000295927 COX8CQ7Z4L0 72 aa17.24■□□□□ 0.35
PTX3-201ENST00000295927 DCANP1Q8TF63 244 aa17.24■□□□□ 0.35
PTX3-201ENST00000295927 SETXQ7Z333 2677 aaKnown RBP17.24■□□□□ 0.35
PTX3-201ENST00000295927 OR9G4Q8NGQ1 327 aa17.23■□□□□ 0.35
PTX3-201ENST00000295927 MS4A6AQ9H2W1 248 aa17.23■□□□□ 0.35
PTX3-201ENST00000295927 PEMTQ9UBM1 199 aa17.23■□□□□ 0.35
PTX3-201ENST00000295927 NPIPB6E9PJ23 425 aa17.23■□□□□ 0.35
PTX3-201ENST00000295927 M0QZ24 198 aa17.23■□□□□ 0.35
PTX3-201ENST00000295927 TRGC2P03986 189 aa17.23■□□□□ 0.35
PTX3-201ENST00000295927 CT45A10P0DMU9 189 aa17.23■□□□□ 0.35
PTX3-201ENST00000295927 C9orf47Q6ZRZ4 202 aa17.23■□□□□ 0.35
PTX3-201ENST00000295927 WFDC3Q8IUB2 231 aa17.23■□□□□ 0.35
PTX3-201ENST00000295927 SETD2Q9BYW2 2564 aaPredicted RBP17.22■□□□□ 0.35
PTX3-201ENST00000295927 NDFIP1Q9BT67 221 aa17.22■□□□□ 0.35
PTX3-201ENST00000295927 CT83Q5H943 113 aa17.21■□□□□ 0.35
PTX3-201ENST00000295927 TMEM78Q5T7P6 136 aa17.21■□□□□ 0.35
PTX3-201ENST00000295927 SAMD13Q5VXD3 122 aa17.21■□□□□ 0.35
PTX3-201ENST00000295927 TSKUQ8WUA8 353 aa17.21■□□□□ 0.35
PTX3-201ENST00000295927 CCL24O00175 119 aa17.21■□□□□ 0.35
PTX3-201ENST00000295927 ZNF705DP0CH99 300 aaPredicted RBP17.21■□□□□ 0.35
PTX3-201ENST00000295927 ZNF705BP0CI00 300 aaPredicted RBP17.21■□□□□ 0.35
PTX3-201ENST00000295927 ID1P41134 155 aa17.21■□□□□ 0.35
PTX3-201ENST00000295927 ZNF138P52744 262 aa17.21■□□□□ 0.35
PTX3-201ENST00000295927 FHL3Q13643 280 aa17.21■□□□□ 0.35
PTX3-201ENST00000295927 OR4B1Q8NGF8 309 aa17.21■□□□□ 0.35
PTX3-201ENST00000295927 BAHCC1Q9P281 2608 aa17.2■□□□□ 0.34
PTX3-201ENST00000295927 OVOL1O14753 267 aa17.2■□□□□ 0.34
PTX3-201ENST00000295927 TFPI2P48307 235 aa17.2■□□□□ 0.34
PTX3-201ENST00000295927 A8MWL6 223 aa17.19■□□□□ 0.34
PTX3-201ENST00000295927 DEFB1P60022 68 aa17.19■□□□□ 0.34
PTX3-201ENST00000295927 NEU1Q99519 415 aa17.19■□□□□ 0.34
PTX3-201ENST00000295927 SPINK4O60575 86 aa17.19■□□□□ 0.34
PTX3-201ENST00000295927 CSN3P07498 182 aa17.19■□□□□ 0.34
PTX3-201ENST00000295927 SMUG1Q53HV7 270 aa17.19■□□□□ 0.34
PTX3-201ENST00000295927 OR2D3Q8NGH3 330 aa17.19■□□□□ 0.34
PTX3-201ENST00000295927 IZUMO1RA6ND01 250 aa17.18■□□□□ 0.34
PTX3-201ENST00000295927 SH2D1AO60880 128 aa17.18■□□□□ 0.34
PTX3-201ENST00000295927 ZNF80P51504 273 aaPredicted RBP17.18■□□□□ 0.34
PTX3-201ENST00000295927 FAM162BQ5T6X4 162 aa17.18■□□□□ 0.34
PTX3-201ENST00000295927 OR10J6PQ8NGY7 276 aa17.18■□□□□ 0.34
PTX3-201ENST00000295927 PPP1R14DQ9NXH3 145 aa17.18■□□□□ 0.34
PTX3-201ENST00000295927 LOC105371267A0A1B0GV96 52 aa17.17■□□□□ 0.34
PTX3-201ENST00000295927 K7EQG2 157 aa17.17■□□□□ 0.34
PTX3-201ENST00000295927 PHOX2AO14813 284 aa17.17■□□□□ 0.34
PTX3-201ENST00000295927 NUP35Q8NFH5 326 aa17.17■□□□□ 0.34
PTX3-201ENST00000295927 NAT8BQ9UHF3 227 aa17.17■□□□□ 0.34
PTX3-201ENST00000295927 HIGD1CA8MV81 97 aa17.17■□□□□ 0.34
PTX3-201ENST00000295927 RPL19P84098 196 aaKnown RBP17.17■□□□□ 0.34
PTX3-201ENST00000295927 F6UB75 175 aa17.16■□□□□ 0.34
PTX3-201ENST00000295927 FRMD6-AS1P0C7T7 363 aa17.16■□□□□ 0.34
PTX3-201ENST00000295927 OR8A1Q8NGG7 326 aa17.16■□□□□ 0.34
PTX3-201ENST00000295927 GTSF1Q8WW33 167 aa17.16■□□□□ 0.34
PTX3-201ENST00000295927 FRZBQ92765 325 aa17.16■□□□□ 0.34
PTX3-201ENST00000295927 LINC00477Q96M19 166 aa17.16■□□□□ 0.34
PTX3-201ENST00000295927 F8P00451 2351 aa17.16■□□□□ 0.34
PTX3-201ENST00000295927 GFRA4Q9GZZ7 299 aa17.15■□□□□ 0.34
PTX3-201ENST00000295927 ADARB2-AS1A8MUL3 147 aa17.15■□□□□ 0.34
PTX3-201ENST00000295927 ZNF688P0C7X2 276 aa17.15■□□□□ 0.34
PTX3-201ENST00000295927 GZMBP10144 247 aa17.15■□□□□ 0.34
PTX3-201ENST00000295927 KRTAP10-3P60369 221 aa17.15■□□□□ 0.34
PTX3-201ENST00000295927 HIST1H1AQ02539 215 aaPredicted RBP17.15■□□□□ 0.34
PTX3-201ENST00000295927 ACTL10Q5JWF8 245 aa17.15■□□□□ 0.34
PTX3-201ENST00000295927 PAFAH1B2P68402 229 aa17.14■□□□□ 0.33
PTX3-201ENST00000295927 MRPL54Q6P161 138 aaKnown RBP17.14■□□□□ 0.33
PTX3-201ENST00000295927 SNRPD3P62318 126 aaKnown RBP17.13■□□□□ 0.33
PTX3-201ENST00000295927 FABP9Q0Z7S8 132 aa17.13■□□□□ 0.33
PTX3-201ENST00000295927 LENEPQ9Y5L5 61 aa17.13■□□□□ 0.33
PTX3-201ENST00000295927 TRAPPC1Q9Y5R8 145 aa17.13■□□□□ 0.33
PTX3-201ENST00000295927 FAM231BA6NCW3 169 aa17.13■□□□□ 0.33
PTX3-201ENST00000295927 PSMG4Q5JS54 123 aa17.13■□□□□ 0.33
PTX3-201ENST00000295927 DYNLRB2Q8TF09 96 aa17.13■□□□□ 0.33
PTX3-201ENST00000295927 FABP5P3A8MUU1 101 aa17.12■□□□□ 0.33
PTX3-201ENST00000295927 HIST1H2BKO60814 126 aa17.12■□□□□ 0.33
PTX3-201ENST00000295927 HIST1H2BJP06899 126 aa17.12■□□□□ 0.33
PTX3-201ENST00000295927 TRGC1P0CF51 173 aa17.12■□□□□ 0.33
PTX3-201ENST00000295927 HIST1H2BOP23527 126 aa17.12■□□□□ 0.33
PTX3-201ENST00000295927 HIST1H2BBP33778 126 aa17.12■□□□□ 0.33
PTX3-201ENST00000295927 HIST1H2BDP58876 126 aa17.12■□□□□ 0.33
PTX3-201ENST00000295927 HIST1H2BCP62807 126 aa17.12■□□□□ 0.33
PTX3-201ENST00000295927 HIST2H2BEQ16778 126 aa17.12■□□□□ 0.33
PTX3-201ENST00000295927 NSUN5P1Q3KNT7 163 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms