RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 DAZ2Q13117 558 aaKnown RBP8.84□□□□□ -0.99
CD44-203ENST00000278386 RAB32Q13637 225 aa8.84□□□□□ -0.99
CD44-203ENST00000278386 ESRGQ1W209 222 aa8.84□□□□□ -0.99
CD44-203ENST00000278386 EIF4E3Q8N5X7 224 aaKnown RBP8.84□□□□□ -0.99
CD44-203ENST00000278386 UPK3BQ9BT76 320 aa8.84□□□□□ -0.99
CD44-203ENST00000278386 CCDC32Q9BV29 185 aa8.84□□□□□ -0.99
CD44-203ENST00000278386 AAMDCQ9H7C9 122 aa8.84□□□□□ -0.99
CD44-203ENST00000278386 GSN-AS1Q9NRJ2 163 aa8.84□□□□□ -0.99
CD44-203ENST00000278386 TMEM14CQ9P0S9 112 aa8.84□□□□□ -0.99
CD44-203ENST00000278386 PRELID1Q9Y255 219 aa8.84□□□□□ -0.99
CD44-203ENST00000278386 DNAH5Q8TE73 4624 aa8.84□□□□□ -1
CD44-203ENST00000278386 APOBP04114 4563 aaKnown RBP8.83□□□□□ -1
CD44-203ENST00000278386 HIST1H1EP10412 219 aaKnown RBP8.83□□□□□ -1
CD44-203ENST00000278386 IFITM3Q01628 133 aa8.83□□□□□ -1
CD44-203ENST00000278386 PDE6HQ13956 83 aa8.83□□□□□ -1
CD44-203ENST00000278386 LINC00299Q6ZSB3 139 aa8.83□□□□□ -1
CD44-203ENST00000278386 EXOC3-AS1Q8N2X6 119 aa8.83□□□□□ -1
CD44-203ENST00000278386 TMEM252Q8N6L7 170 aa8.83□□□□□ -1
CD44-203ENST00000278386 FUT9Q9Y231 359 aa8.83□□□□□ -1
CD44-203ENST00000278386 IGKV2-40A0A087WW87 121 aaPredicted RBP8.82□□□□□ -1
CD44-203ENST00000278386 A0A1W2PPQ1 181 aa8.82□□□□□ -1
CD44-203ENST00000278386 KLLNB2CW77 178 aa8.82□□□□□ -1
CD44-203ENST00000278386 RGS13O14921 159 aa8.82□□□□□ -1
CD44-203ENST00000278386 IGKV2D-40P01614 121 aaPredicted RBP8.82□□□□□ -1
CD44-203ENST00000278386 GPX1P07203 203 aa8.82□□□□□ -1
CD44-203ENST00000278386 RNASE4P34096 147 aaKnown RBP8.82□□□□□ -1
CD44-203ENST00000278386 CD300CQ08708 224 aa8.82□□□□□ -1
CD44-203ENST00000278386 ATP6V1FQ16864 119 aa8.82□□□□□ -1
CD44-203ENST00000278386 GCSAMLQ5JQS6 135 aa8.82□□□□□ -1
CD44-203ENST00000278386 TMEM78Q5T7P6 136 aa8.82□□□□□ -1
CD44-203ENST00000278386 C11orf72Q8NBR9 251 aa8.82□□□□□ -1
CD44-203ENST00000278386 LINC00477Q96M19 166 aa8.82□□□□□ -1
CD44-203ENST00000278386 NPCDR1Q9BY65 106 aa8.82□□□□□ -1
CD44-203ENST00000278386 A0A096LPF7 62 aa8.81□□□□□ -1
CD44-203ENST00000278386 FAM240BA0A1B0GVZ2 78 aa8.81□□□□□ -1
CD44-203ENST00000278386 MPDU1O75352 247 aa8.81□□□□□ -1
CD44-203ENST00000278386 NDUFB4O95168 129 aa8.81□□□□□ -1
CD44-203ENST00000278386 ICAM4Q14773 271 aa8.81□□□□□ -1
CD44-203ENST00000278386 ANXA2RQ3ZCQ2 193 aa8.81□□□□□ -1
CD44-203ENST00000278386 FAM122CQ6P4D5 195 aa8.81□□□□□ -1
CD44-203ENST00000278386 THAP6Q8TBB0 222 aa8.81□□□□□ -1
CD44-203ENST00000278386 ARPC5LQ9BPX5 153 aa8.81□□□□□ -1
CD44-203ENST00000278386 SLC25A2Q9BXI2 301 aa8.81□□□□□ -1
CD44-203ENST00000278386 AGPAT4-IT1Q9H0P7 198 aa8.81□□□□□ -1
CD44-203ENST00000278386 PTTG2Q9NZH5 202 aa8.81□□□□□ -1
CD44-203ENST00000278386 IGHV3-53P01767 116 aa8.8□□□□□ -1
CD44-203ENST00000278386 TCL1AP56279 114 aa8.8□□□□□ -1
CD44-203ENST00000278386 LINC00315P59091 139 aa8.8□□□□□ -1
CD44-203ENST00000278386 MIR17HGQ75NE6 70 aa8.8□□□□□ -1
CD44-203ENST00000278386 CHAC2Q8WUX2 184 aa8.8□□□□□ -1
CD44-203ENST00000278386 S100ZQ8WXG8 99 aa8.8□□□□□ -1
CD44-203ENST00000278386 VSIG2Q96IQ7 327 aa8.8□□□□□ -1
CD44-203ENST00000278386 FAM19A4Q96LR4 140 aa8.8□□□□□ -1
CD44-203ENST00000278386 LINC00467Q9BRT7 94 aa8.8□□□□□ -1
CD44-203ENST00000278386 MRPL16Q9NX20 251 aaKnown RBP8.8□□□□□ -1
CD44-203ENST00000278386 KLF12Q9Y4X4 402 aa8.8□□□□□ -1
CD44-203ENST00000278386 ICOSQ9Y6W8 199 aa8.8□□□□□ -1
CD44-203ENST00000278386 PAX4O43316 350 aa8.79□□□□□ -1
CD44-203ENST00000278386 SPINK4O60575 86 aa8.79□□□□□ -1
CD44-203ENST00000278386 ZNF324O75467 553 aaPredicted RBP8.79□□□□□ -1
CD44-203ENST00000278386 UPK1BO75841 260 aa8.79□□□□□ -1
CD44-203ENST00000278386 CRISP2P16562 243 aa8.79□□□□□ -1
CD44-203ENST00000278386 ASAH1Q13510 395 aa8.79□□□□□ -1
CD44-203ENST00000278386 IBA57Q5T440 356 aaKnown RBP8.79□□□□□ -1
CD44-203ENST00000278386 PRR9Q5T870 116 aa8.79□□□□□ -1
CD44-203ENST00000278386 MZT2BQ6NZ67 158 aa8.79□□□□□ -1
CD44-203ENST00000278386 C9orf47Q6ZRZ4 202 aa8.79□□□□□ -1
CD44-203ENST00000278386 OR5C1Q8NGR4 320 aa8.79□□□□□ -1
CD44-203ENST00000278386 C18orf15Q96N68 181 aa8.79□□□□□ -1
CD44-203ENST00000278386 VGLL1Q99990 258 aa8.79□□□□□ -1
CD44-203ENST00000278386 KCNIP2Q9NS61 270 aa8.79□□□□□ -1
CD44-203ENST00000278386 IGHV1OR15-1A0A075B7D0 117 aa8.78□□□□□ -1
CD44-203ENST00000278386 SIVA1O15304 175 aa8.78□□□□□ -1
CD44-203ENST00000278386 OR10J4P0C629 311 aa8.78□□□□□ -1
CD44-203ENST00000278386 BTF3P20290 206 aaKnown RBP8.78□□□□□ -1
CD44-203ENST00000278386 KRTAP10-2P60368 255 aa8.78□□□□□ -1
CD44-203ENST00000278386 NHLH2Q02577 135 aa8.78□□□□□ -1
CD44-203ENST00000278386 ZNF415Q09FC8 603 aa8.78□□□□□ -1
CD44-203ENST00000278386 IL15RAQ13261 267 aa8.78□□□□□ -1
CD44-203ENST00000278386 LRRC37A5PQ49AS3 106 aa8.78□□□□□ -1
CD44-203ENST00000278386 ZFAND2AQ8N6M9 145 aa8.78□□□□□ -1
CD44-203ENST00000278386 Q8TAT8 98 aa8.78□□□□□ -1
CD44-203ENST00000278386 ST6GAL2Q96JF0 529 aa8.78□□□□□ -1
CD44-203ENST00000278386 PAXXQ9BUH6 204 aa8.78□□□□□ -1
CD44-203ENST00000278386 SLC25A31Q9H0C2 315 aa8.78□□□□□ -1
CD44-203ENST00000278386 OR51M1Q9H341 326 aa8.78□□□□□ -1
CD44-203ENST00000278386 TP53TG3Q9ULZ0 132 aa8.78□□□□□ -1
CD44-203ENST00000278386 OR7C2O60412 319 aa8.77□□□□□ -1.01
CD44-203ENST00000278386 NXPH4O95158 308 aa8.77□□□□□ -1.01
CD44-203ENST00000278386 SIX6O95475 246 aa8.77□□□□□ -1.01
CD44-203ENST00000278386 NBEAP1P0C6P0 100 aa8.77□□□□□ -1.01
CD44-203ENST00000278386 ENKURQ8TC29 256 aa8.77□□□□□ -1.01
CD44-203ENST00000278386 PHYHIPLQ96FC7 376 aa8.77□□□□□ -1.01
CD44-203ENST00000278386 FAM167A-AS1Q96KT0 104 aa8.77□□□□□ -1.01
CD44-203ENST00000278386 MRPL32Q9BYC8 188 aaKnown RBP8.77□□□□□ -1.01
CD44-203ENST00000278386 SCRT2Q9NQ03 307 aa8.77□□□□□ -1.01
CD44-203ENST00000278386 ZNF492Q9P255 531 aa8.77□□□□□ -1.01
CD44-203ENST00000278386 E5RGE8 158 aa8.76□□□□□ -1.01
CD44-203ENST00000278386 C17orf112F2Z3M2 114 aa8.76□□□□□ -1.01
CD44-203ENST00000278386 NMBP08949 121 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms