RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 S1PR3Q99500 378 aa7.23□□□□□ -1.25
PDGFC-201ENST00000274071 ASCL2Q99929 193 aa7.23□□□□□ -1.25
PDGFC-201ENST00000274071 MSRB2Q9Y3D2 182 aa7.23□□□□□ -1.25
PDGFC-201ENST00000274071 MBD3L4A6NDZ8 208 aaPredicted RBP7.23□□□□□ -1.25
PDGFC-201ENST00000274071 MBD3L3A6NE82 208 aaPredicted RBP7.23□□□□□ -1.25
PDGFC-201ENST00000274071 MBD3L5A6NJ08 208 aaPredicted RBP7.23□□□□□ -1.25
PDGFC-201ENST00000274071 CCL4P13236 92 aa7.23□□□□□ -1.25
PDGFC-201ENST00000274071 CD69Q07108 199 aa7.23□□□□□ -1.25
PDGFC-201ENST00000274071 TEX36Q5VZQ5 186 aa7.23□□□□□ -1.25
PDGFC-201ENST00000274071 LYZL1Q6UWQ5 148 aa7.23□□□□□ -1.25
PDGFC-201ENST00000274071 SRXN1Q9BYN0 137 aa7.23□□□□□ -1.25
PDGFC-201ENST00000274071 IFI27L2Q9H2X8 130 aa7.23□□□□□ -1.25
PDGFC-201ENST00000274071 LINC01546A6NGU7 62 aa7.23□□□□□ -1.25
PDGFC-201ENST00000274071 NTN3O00634 580 aaPredicted RBP7.23□□□□□ -1.25
PDGFC-201ENST00000274071 HRCT1Q6UXD1 115 aa7.23□□□□□ -1.25
PDGFC-201ENST00000274071 TIMD4Q96H15 378 aa7.23□□□□□ -1.25
PDGFC-201ENST00000274071 Q9H3A6 140 aa7.23□□□□□ -1.25
PDGFC-201ENST00000274071 LGALS9O00182 355 aa7.22□□□□□ -1.25
PDGFC-201ENST00000274071 GAS8-AS1O95177 125 aa7.22□□□□□ -1.25
PDGFC-201ENST00000274071 RPL13AP40429 203 aaKnown RBP7.22□□□□□ -1.25
PDGFC-201ENST00000274071 CRIP1P50238 77 aa7.22□□□□□ -1.25
PDGFC-201ENST00000274071 WDR86Q86TI4 376 aa7.22□□□□□ -1.25
PDGFC-201ENST00000274071 MRPL20Q9BYC9 149 aaKnown RBP7.22□□□□□ -1.25
PDGFC-201ENST00000274071 DEFB126Q9BYW3 111 aa7.22□□□□□ -1.25
PDGFC-201ENST00000274071 SVILO95425 2214 aa7.22□□□□□ -1.25
PDGFC-201ENST00000274071 MRPS12O15235 138 aaKnown RBP7.22□□□□□ -1.25
PDGFC-201ENST00000274071 MZT1Q08AG7 82 aa7.22□□□□□ -1.25
PDGFC-201ENST00000274071 EBI3Q14213 229 aa7.22□□□□□ -1.25
PDGFC-201ENST00000274071 C3orf36Q3SXR2 165 aa7.22□□□□□ -1.25
PDGFC-201ENST00000274071 AAED1Q7RTV5 226 aa7.22□□□□□ -1.25
PDGFC-201ENST00000274071 DUX3Q96PT4 197 aa7.22□□□□□ -1.25
PDGFC-201ENST00000274071 CHCHD2Q9Y6H1 151 aaPredicted RBP7.22□□□□□ -1.25
PDGFC-201ENST00000274071 IGHV3-13P01766 116 aa7.21□□□□□ -1.25
PDGFC-201ENST00000274071 IGHV3-9P01782 118 aa7.21□□□□□ -1.25
PDGFC-201ENST00000274071 CFC1BP0CG36 223 aa7.21□□□□□ -1.25
PDGFC-201ENST00000274071 CFC1P0CG37 223 aa7.21□□□□□ -1.25
PDGFC-201ENST00000274071 PLGLB1Q02325 96 aa7.21□□□□□ -1.25
PDGFC-201ENST00000274071 LINC01559Q495D7 138 aa7.21□□□□□ -1.25
PDGFC-201ENST00000274071 C2orf83Q53S99 150 aa7.21□□□□□ -1.25
PDGFC-201ENST00000274071 C1orf229Q6ZS94 237 aaPredicted RBP7.21□□□□□ -1.25
PDGFC-201ENST00000274071 DOCK7Q96N67 2140 aa7.21□□□□□ -1.25
PDGFC-201ENST00000274071 RTL8AQ9BWD3 113 aa7.21□□□□□ -1.25
PDGFC-201ENST00000274071 SS18L1O75177 396 aaPredicted RBP7.21□□□□□ -1.26
PDGFC-201ENST00000274071 TFF1P04155 84 aa7.21□□□□□ -1.26
PDGFC-201ENST00000274071 CD3EP07766 207 aa7.21□□□□□ -1.26
PDGFC-201ENST00000274071 HOXA4Q00056 320 aaPredicted RBP7.21□□□□□ -1.26
PDGFC-201ENST00000274071 PMVKQ15126 192 aa7.21□□□□□ -1.26
PDGFC-201ENST00000274071 GOLT1AQ6ZVE7 132 aa7.21□□□□□ -1.26
PDGFC-201ENST00000274071 TMEM105Q8N8V8 129 aa7.21□□□□□ -1.26
PDGFC-201ENST00000274071 CFHR4Q92496 578 aa7.21□□□□□ -1.26
PDGFC-201ENST00000274071 PLEKHB2Q96CS7 222 aa7.21□□□□□ -1.26
PDGFC-201ENST00000274071 IGHV3-48P01763 117 aa7.2□□□□□ -1.26
PDGFC-201ENST00000274071 SSR4P51571 173 aa7.2□□□□□ -1.26
PDGFC-201ENST00000274071 DUX4L9Q6RFH8 374 aaPredicted RBP7.2□□□□□ -1.26
PDGFC-201ENST00000274071 Q8IYB0 196 aa7.2□□□□□ -1.26
PDGFC-201ENST00000274071 IGFBPL1Q8WX77 278 aa7.2□□□□□ -1.26
PDGFC-201ENST00000274071 DCTN5Q9BTE1 182 aa7.2□□□□□ -1.26
PDGFC-201ENST00000274071 GPR179Q6PRD1 2367 aa7.2□□□□□ -1.26
PDGFC-201ENST00000274071 CELSR3Q9NYQ7 3312 aa7.2□□□□□ -1.26
PDGFC-201ENST00000274071 A0A096LPE4 126 aa7.2□□□□□ -1.26
PDGFC-201ENST00000274071 A0A1W2PPZ6 126 aa7.2□□□□□ -1.26
PDGFC-201ENST00000274071 CDX4O14627 284 aaPredicted RBP7.2□□□□□ -1.26
PDGFC-201ENST00000274071 SPINT2O43291 252 aa7.2□□□□□ -1.26
PDGFC-201ENST00000274071 RNASE2P10153 161 aaKnown RBP7.2□□□□□ -1.26
PDGFC-201ENST00000274071 PLNP26678 52 aa7.2□□□□□ -1.26
PDGFC-201ENST00000274071 PRCDQ00LT1 54 aa7.2□□□□□ -1.26
PDGFC-201ENST00000274071 SRSF2Q01130 221 aaKnown RBP7.2□□□□□ -1.26
PDGFC-201ENST00000274071 PCOLCEQ15113 449 aa7.2□□□□□ -1.26
PDGFC-201ENST00000274071 GAGE2AQ6NT46 116 aa7.2□□□□□ -1.26
PDGFC-201ENST00000274071 SCGB1D4Q6XE38 83 aa7.2□□□□□ -1.26
PDGFC-201ENST00000274071 CTSZQ9UBR2 303 aa7.2□□□□□ -1.26
PDGFC-201ENST00000274071 DSCAML1Q8TD84 2053 aa7.2□□□□□ -1.26
PDGFC-201ENST00000274071 IGHV1-45A0A0A0MS14 117 aa7.2□□□□□ -1.26
PDGFC-201ENST00000274071 PRB4P10163 310 aaPredicted RBP7.2□□□□□ -1.26
PDGFC-201ENST00000274071 MDP1Q86V88 176 aa7.2□□□□□ -1.26
PDGFC-201ENST00000274071 SDK2Q58EX2 2172 aa7.19□□□□□ -1.26
PDGFC-201ENST00000274071 IGKV1D-37A0A075B6S9 117 aa7.19□□□□□ -1.26
PDGFC-201ENST00000274071 UTF1Q5T230 341 aa7.19□□□□□ -1.26
PDGFC-201ENST00000274071 Q5XG85 94 aa7.19□□□□□ -1.26
PDGFC-201ENST00000274071 ZNF503-AS2A6NEH8 195 aa7.19□□□□□ -1.26
PDGFC-201ENST00000274071 ZNF815PA8K554 130 aa7.19□□□□□ -1.26
PDGFC-201ENST00000274071 DKK1O94907 266 aa7.19□□□□□ -1.26
PDGFC-201ENST00000274071 OXTP01178 125 aa7.19□□□□□ -1.26
PDGFC-201ENST00000274071 MYOZ3Q8TDC0 251 aa7.19□□□□□ -1.26
PDGFC-201ENST00000274071 DPH3Q96FX2 82 aa7.19□□□□□ -1.26
PDGFC-201ENST00000274071 IMMP1LQ96LU5 166 aa7.19□□□□□ -1.26
PDGFC-201ENST00000274071 ARRDC1-AS1Q9H2J1 176 aa7.19□□□□□ -1.26
PDGFC-201ENST00000274071 NXT2Q9NPJ8 142 aaKnown RBP7.19□□□□□ -1.26
PDGFC-201ENST00000274071 INS-IGF2F8WCM5 200 aa7.18□□□□□ -1.26
PDGFC-201ENST00000274071 J3QLI3 93 aa7.18□□□□□ -1.26
PDGFC-201ENST00000274071 COX6A1P12074 109 aa7.18□□□□□ -1.26
PDGFC-201ENST00000274071 HOXB4P17483 251 aaPredicted RBP7.18□□□□□ -1.26
PDGFC-201ENST00000274071 EXOC3-AS1Q8N2X6 119 aa7.18□□□□□ -1.26
PDGFC-201ENST00000274071 PRO1854Q9UHT4 67 aa7.18□□□□□ -1.26
PDGFC-201ENST00000274071 LINC00527Q9UJ94 153 aa7.18□□□□□ -1.26
PDGFC-201ENST00000274071 H3BMM0 161 aa7.18□□□□□ -1.26
PDGFC-201ENST00000274071 GP9P14770 177 aa7.18□□□□□ -1.26
PDGFC-201ENST00000274071 HLA-DMBP28068 263 aa7.18□□□□□ -1.26
PDGFC-201ENST00000274071 FAM90A1Q86YD7 464 aa7.18□□□□□ -1.26
PDGFC-201ENST00000274071 UBE2WQ96B02 151 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms