RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 Q5PR19 223 aa13.23□□□□□ -0.29
PHRF1-201ENST00000264555 MUC6Q6W4X9 2439 aa13.22□□□□□ -0.29
PHRF1-201ENST00000264555 RITA1Q96K30 269 aa13.22□□□□□ -0.29
PHRF1-201ENST00000264555 PYGO2Q9BRQ0 406 aa13.22□□□□□ -0.29
PHRF1-201ENST00000264555 A0A1B0GV72 72 aa13.22□□□□□ -0.29
PHRF1-201ENST00000264555 TRGV4A0A0C4DH28 118 aa13.21□□□□□ -0.29
PHRF1-201ENST00000264555 Q6ZWC4 215 aa13.21□□□□□ -0.29
PHRF1-201ENST00000264555 INS-IGF2F8WCM5 200 aa13.21□□□□□ -0.29
PHRF1-201ENST00000264555 ADORA2A-AS1P86434 159 aa13.21□□□□□ -0.29
PHRF1-201ENST00000264555 I3L2K1 104 aa13.21□□□□□ -0.29
PHRF1-201ENST00000264555 MAPK1IP1LQ8NDC0 245 aa13.21□□□□□ -0.3
PHRF1-201ENST00000264555 A0A1B0GWB2 263 aa13.2□□□□□ -0.3
PHRF1-201ENST00000264555 H3BUA1 57 aa13.2□□□□□ -0.3
PHRF1-201ENST00000264555 HOXA3O43365 443 aaPredicted RBP13.2□□□□□ -0.3
PHRF1-201ENST00000264555 Q8NA96 180 aa13.2□□□□□ -0.3
PHRF1-201ENST00000264555 P0C879 139 aa13.2□□□□□ -0.3
PHRF1-201ENST00000264555 C17orf77Q96MU5 243 aa13.2□□□□□ -0.3
PHRF1-201ENST00000264555 MCRIP2Q9BUT9 160 aaKnown RBP13.2□□□□□ -0.3
PHRF1-201ENST00000264555 MED13LQ71F56 2210 aa13.19□□□□□ -0.3
PHRF1-201ENST00000264555 INSP01308 110 aa13.19□□□□□ -0.3
PHRF1-201ENST00000264555 IGLV2-23P01705 113 aa13.19□□□□□ -0.3
PHRF1-201ENST00000264555 TOMM7Q9P0U1 55 aa13.19□□□□□ -0.3
PHRF1-201ENST00000264555 NUP210LQ5VU65 1888 aa13.19□□□□□ -0.3
PHRF1-201ENST00000264555 IGLV1-47P01700 117 aa13.19□□□□□ -0.3
PHRF1-201ENST00000264555 MRPL51Q4U2R6 128 aaKnown RBP13.19□□□□□ -0.3
PHRF1-201ENST00000264555 VGLL1Q99990 258 aa13.19□□□□□ -0.3
PHRF1-201ENST00000264555 ABCA1O95477 2261 aa13.19□□□□□ -0.3
PHRF1-201ENST00000264555 IGHV3-73A0A0B4J1V6 119 aa13.19□□□□□ -0.3
PHRF1-201ENST00000264555 SCGB1A1P11684 91 aa13.19□□□□□ -0.3
PHRF1-201ENST00000264555 FBXL19-AS1Q494R0 122 aa13.19□□□□□ -0.3
PHRF1-201ENST00000264555 MPV17L2Q567V2 206 aa13.19□□□□□ -0.3
PHRF1-201ENST00000264555 WIPF2Q8TF74 440 aaPredicted RBP13.19□□□□□ -0.3
PHRF1-201ENST00000264555 BDP1A6H8Y1 2624 aa13.19□□□□□ -0.3
PHRF1-201ENST00000264555 PATE2Q6UY27 113 aa13.19□□□□□ -0.3
PHRF1-201ENST00000264555 A0A087WWL8 130 aa13.18□□□□□ -0.3
PHRF1-201ENST00000264555 CENPVL3A0A0U1RRI6 287 aa13.18□□□□□ -0.3
PHRF1-201ENST00000264555 K7EIM0 57 aa13.18□□□□□ -0.3
PHRF1-201ENST00000264555 ZC2HC1BQ5TFG8 222 aa13.18□□□□□ -0.3
PHRF1-201ENST00000264555 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.18□□□□□ -0.32e-7■■■■□ 23.9
PHRF1-201ENST00000264555 OR13C6PQ8NH95 151 aa13.18□□□□□ -0.3
PHRF1-201ENST00000264555 A0A087X0K7 114 aa13.18□□□□□ -0.3
PHRF1-201ENST00000264555 DEFB131AP59861 70 aa13.18□□□□□ -0.3
PHRF1-201ENST00000264555 OR5A1Q8NGJ0 315 aa13.18□□□□□ -0.3
PHRF1-201ENST00000264555 GP9P14770 177 aa13.18□□□□□ -0.3
PHRF1-201ENST00000264555 ASPHD1Q5U4P2 390 aa13.18□□□□□ -0.3
PHRF1-201ENST00000264555 BCL6BQ8N143 479 aaPredicted RBP13.17□□□□□ -0.3
PHRF1-201ENST00000264555 Q8N8P6 123 aa13.17□□□□□ -0.3
PHRF1-201ENST00000264555 CREBBPQ92793 2442 aa13.17□□□□□ -0.3
PHRF1-201ENST00000264555 IGKV1-17P01599 117 aa13.17□□□□□ -0.3
PHRF1-201ENST00000264555 DNAL4O96015 105 aa13.17□□□□□ -0.3
PHRF1-201ENST00000264555 IGKV3D-20A0A0C4DH25 116 aa13.17□□□□□ -0.3
PHRF1-201ENST00000264555 LINC01619G3V211 115 aa13.17□□□□□ -0.3
PHRF1-201ENST00000264555 IGLV11-55A0A075B6I3 123 aa13.16□□□□□ -0.3
PHRF1-201ENST00000264555 TRGV1A0A0A0MS02 117 aa13.16□□□□□ -0.3
PHRF1-201ENST00000264555 IGHV7-81A0A0B4J1V7 117 aa13.16□□□□□ -0.3
PHRF1-201ENST00000264555 IGHV1-24A0A0C4DH33 117 aa13.16□□□□□ -0.3
PHRF1-201ENST00000264555 CGB3P0DN86 165 aa13.16□□□□□ -0.3
PHRF1-201ENST00000264555 CGB7P0DN87 165 aa13.16□□□□□ -0.3
PHRF1-201ENST00000264555 RPL36AP83881 106 aaKnown RBP13.16□□□□□ -0.3
PHRF1-201ENST00000264555 RPL36ALQ969Q0 106 aaKnown RBP13.16□□□□□ -0.3
PHRF1-201ENST00000264555 Q96MF0 132 aa13.16□□□□□ -0.3
PHRF1-201ENST00000264555 MORN5Q5VZ52 161 aa13.16□□□□□ -0.3
PHRF1-201ENST00000264555 LINC00574Q9H8X3 128 aa13.16□□□□□ -0.3
PHRF1-201ENST00000264555 IGHV7-4-1A0A0J9YVY3 117 aa13.16□□□□□ -0.3
PHRF1-201ENST00000264555 COA6Q5JTJ3 125 aaKnown RBP13.16□□□□□ -0.3
PHRF1-201ENST00000264555 TRAV2A0A0B4J234 112 aa13.16□□□□□ -0.3
PHRF1-201ENST00000264555 PRSS57Q6UWY2 283 aa13.16□□□□□ -0.3
PHRF1-201ENST00000264555 SAMD5Q5TGI4 173 aa13.15□□□□□ -0.3
PHRF1-201ENST00000264555 FAM167A-AS1Q96KT0 104 aa13.15□□□□□ -0.3
PHRF1-201ENST00000264555 ZNF479Q96JC4 524 aa13.15□□□□□ -0.3
PHRF1-201ENST00000264555 TEX43Q6ZNM6 134 aa13.15□□□□□ -0.3
PHRF1-201ENST00000264555 DEFB104AQ8WTQ1 72 aa13.15□□□□□ -0.3
PHRF1-201ENST00000264555 C1QTNF4Q9BXJ3 329 aa13.15□□□□□ -0.3
PHRF1-201ENST00000264555 ADARB2-AS1A8MUL3 147 aa13.14□□□□□ -0.31
PHRF1-201ENST00000264555 DLEU1O43261 78 aa13.14□□□□□ -0.31
PHRF1-201ENST00000264555 HTN3P15516 51 aa13.14□□□□□ -0.31
PHRF1-201ENST00000264555 TRPT1Q86TN4 253 aaKnown RBP13.14□□□□□ -0.31
PHRF1-201ENST00000264555 PLEKHB2Q96CS7 222 aa13.14□□□□□ -0.31
PHRF1-201ENST00000264555 IGKV1OR2-108A0A075B7D4 117 aa13.14□□□□□ -0.31
PHRF1-201ENST00000264555 PROP1O75360 226 aa13.14□□□□□ -0.31
PHRF1-201ENST00000264555 BRWD1-AS2P59051 145 aa13.14□□□□□ -0.31
PHRF1-201ENST00000264555 MRPL53Q96EL3 112 aaKnown RBP13.14□□□□□ -0.31
PHRF1-201ENST00000264555 ANXA2RQ3ZCQ2 193 aa13.14□□□□□ -0.31
PHRF1-201ENST00000264555 PRADC1Q9BSG0 188 aa13.14□□□□□ -0.31
PHRF1-201ENST00000264555 TEX22C9J3V5 150 aa13.14□□□□□ -0.31
PHRF1-201ENST00000264555 IGFBPL1Q8WX77 278 aa13.14□□□□□ -0.31
PHRF1-201ENST00000264555 RBAKDNA6NC62 111 aa13.13□□□□□ -0.31
PHRF1-201ENST00000264555 EREGO14944 169 aa13.13□□□□□ -0.31
PHRF1-201ENST00000264555 ELANEP08246 267 aa13.13□□□□□ -0.31
PHRF1-201ENST00000264555 SPINK13Q1W4C9 94 aa13.13□□□□□ -0.31
PHRF1-201ENST00000264555 STPG4Q8N801 248 aa13.13□□□□□ -0.31
PHRF1-201ENST00000264555 SIGLEC8Q9NYZ4 499 aa13.13□□□□□ -0.31
PHRF1-201ENST00000264555 KLF2Q9Y5W3 355 aaPredicted RBP13.13□□□□□ -0.31
PHRF1-201ENST00000264555 PLCE1Q9P212 2302 aa13.13□□□□□ -0.31
PHRF1-201ENST00000264555 IGHV3-64A0A075B6Q5 118 aa13.13□□□□□ -0.31
PHRF1-201ENST00000264555 IGHV4-61A0A0C4DH41 118 aa13.13□□□□□ -0.31
PHRF1-201ENST00000264555 CHCHD5Q9BSY4 110 aa13.13□□□□□ -0.31
PHRF1-201ENST00000264555 DTX2Q86UW9 622 aa13.13□□□□□ -0.31
PHRF1-201ENST00000264555 IGF2BP2-AS1Q96M15 143 aa13.13□□□□□ -0.31
PHRF1-201ENST00000264555 TMEM238C9JI98 176 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms