RNA–Protein interactions for RNA: ENST00000263309.7

CLNS1A-201, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-201ENST00000263309 C20orf173Q96LM9 149 aa9.23□□□□□ -0.93
CLNS1A-201ENST00000263309 WWC2-AS2Q96NR7 200 aa9.23□□□□□ -0.93
CLNS1A-201ENST00000263309 ODF3Q96PU9 254 aa9.23□□□□□ -0.93
CLNS1A-201ENST00000263309 RPH3ALQ9UNE2 315 aa9.23□□□□□ -0.93
CLNS1A-201ENST00000263309 SORL1Q92673 2214 aa9.23□□□□□ -0.93
CLNS1A-201ENST00000263309 IGHV3OR16-12A0A075B7B8 117 aa9.22□□□□□ -0.93
CLNS1A-201ENST00000263309 RAB19A4D1S5 217 aa9.22□□□□□ -0.93
CLNS1A-201ENST00000263309 ZNF705FA8MVS1 300 aaPredicted RBP9.22□□□□□ -0.93
CLNS1A-201ENST00000263309 SLC17A3O00476 420 aa9.22□□□□□ -0.93
CLNS1A-201ENST00000263309 TAGLN2P37802 199 aaKnown RBP9.22□□□□□ -0.93
CLNS1A-201ENST00000263309 CST9LP1Q5W188 147 aa9.22□□□□□ -0.93
CLNS1A-201ENST00000263309 IGF2BP2-AS1Q96M15 143 aa9.22□□□□□ -0.93
CLNS1A-201ENST00000263309 LINC01587Q99440 93 aa9.22□□□□□ -0.93
CLNS1A-201ENST00000263309 TRAV1-1A0A0B4J248 108 aa9.21□□□□□ -0.94
CLNS1A-201ENST00000263309 TRBV7-9A0A0J9YWB2 115 aa9.21□□□□□ -0.94
CLNS1A-201ENST00000263309 TEX48A0A1B0GUV7 120 aa9.21□□□□□ -0.94
CLNS1A-201ENST00000263309 NDUFB4O95168 129 aa9.21□□□□□ -0.94
CLNS1A-201ENST00000263309 S100A9P06702 114 aaKnown RBP9.21□□□□□ -0.94
CLNS1A-201ENST00000263309 ZNF138P52744 262 aa9.21□□□□□ -0.94
CLNS1A-201ENST00000263309 FXYD7P58549 80 aa9.21□□□□□ -0.94
CLNS1A-201ENST00000263309 SAPCD1Q5SSQ6 148 aa9.21□□□□□ -0.94
CLNS1A-201ENST00000263309 UQCC3Q6UW78 93 aa9.21□□□□□ -0.94
CLNS1A-201ENST00000263309 C9orf47Q6ZRZ4 202 aa9.21□□□□□ -0.94
CLNS1A-201ENST00000263309 SUN5Q8TC36 379 aa9.21□□□□□ -0.94
CLNS1A-201ENST00000263309 MBD3L1Q8WWY6 194 aa9.21□□□□□ -0.94
CLNS1A-201ENST00000263309 HIST1H2BAQ96A08 127 aa9.21□□□□□ -0.94
CLNS1A-201ENST00000263309 TXNDC17Q9BRA2 123 aa9.21□□□□□ -0.94
CLNS1A-201ENST00000263309 OVOL2Q9BRP0 275 aa9.21□□□□□ -0.94
CLNS1A-201ENST00000263309 MANBALQ9NQG1 85 aa9.21□□□□□ -0.94
CLNS1A-201ENST00000263309 LENEPQ9Y5L5 61 aa9.21□□□□□ -0.94
CLNS1A-201ENST00000263309 ARL2-SNX15V9GYD0 113 aa9.21□□□□□ -0.94
CLNS1A-201ENST00000263309 DIRC3C9JPN6 131 aa9.2□□□□□ -0.94
CLNS1A-201ENST00000263309 NPIPB6E9PJ23 425 aa9.2□□□□□ -0.94
CLNS1A-201ENST00000263309 ZNF705DP0CH99 300 aaPredicted RBP9.2□□□□□ -0.94
CLNS1A-201ENST00000263309 ZNF705BP0CI00 300 aaPredicted RBP9.2□□□□□ -0.94
CLNS1A-201ENST00000263309 HLA-DMBP28068 263 aa9.2□□□□□ -0.94
CLNS1A-201ENST00000263309 UBE2G1P62253 170 aa9.2□□□□□ -0.94
CLNS1A-201ENST00000263309 SPINK13Q1W4C9 94 aa9.2□□□□□ -0.94
CLNS1A-201ENST00000263309 RRN3P1Q2M238 152 aa9.2□□□□□ -0.94
CLNS1A-201ENST00000263309 GDF5OSQ5U4N7 250 aa9.2□□□□□ -0.94
CLNS1A-201ENST00000263309 H7BYZ3 331 aa9.19□□□□□ -0.94
CLNS1A-201ENST00000263309 M0R3E3 92 aa9.19□□□□□ -0.94
CLNS1A-201ENST00000263309 FHITP49789 147 aa9.19□□□□□ -0.94
CLNS1A-201ENST00000263309 FGF8P55075 233 aaPredicted RBP9.19□□□□□ -0.94
CLNS1A-201ENST00000263309 UBE2G2P60604 165 aa9.19□□□□□ -0.94
CLNS1A-201ENST00000263309 NEU1Q99519 415 aa9.19□□□□□ -0.94
CLNS1A-201ENST00000263309 ATG101Q9BSB4 218 aa9.19□□□□□ -0.94
CLNS1A-201ENST00000263309 SLC35B3Q9H1N7 401 aa9.19□□□□□ -0.94
CLNS1A-201ENST00000263309 EPDR1Q9UM22 224 aa9.19□□□□□ -0.94
CLNS1A-201ENST00000263309 HTN1P15515 57 aa9.18□□□□□ -0.94
CLNS1A-201ENST00000263309 GOLT1AQ6ZVE7 132 aa9.18□□□□□ -0.94
CLNS1A-201ENST00000263309 CYB561D1Q8N8Q1 229 aa9.18□□□□□ -0.94
CLNS1A-201ENST00000263309 ZNF503Q96F45 646 aa9.18□□□□□ -0.94
CLNS1A-201ENST00000263309 ZNF492Q9P255 531 aa9.18□□□□□ -0.94
CLNS1A-201ENST00000263309 TENM3Q9P273 2699 aa9.18□□□□□ -0.94
CLNS1A-201ENST00000263309 CXorf65A6NEN9 183 aa9.17□□□□□ -0.94
CLNS1A-201ENST00000263309 M0R2Z0 102 aa9.17□□□□□ -0.94
CLNS1A-201ENST00000263309 TCRAP04437 139 aa9.17□□□□□ -0.94
CLNS1A-201ENST00000263309 RNASE4P34096 147 aaKnown RBP9.17□□□□□ -0.94
CLNS1A-201ENST00000263309 TAS2R60P59551 318 aa9.17□□□□□ -0.94
CLNS1A-201ENST00000263309 PMS2P11Q13670 270 aa9.17□□□□□ -0.94
CLNS1A-201ENST00000263309 ZNF493Q6ZR52 646 aa9.17□□□□□ -0.94
CLNS1A-201ENST00000263309 AGPAT4-IT1Q9H0P7 198 aa9.17□□□□□ -0.94
CLNS1A-201ENST00000263309 SMDT1Q9H4I9 107 aa9.17□□□□□ -0.94
CLNS1A-201ENST00000263309 IGKV2-40A0A087WW87 121 aaPredicted RBP9.16□□□□□ -0.94
CLNS1A-201ENST00000263309 A0A1B0GV50 99 aa9.16□□□□□ -0.94
CLNS1A-201ENST00000263309 A8MTW9 85 aa9.16□□□□□ -0.94
CLNS1A-201ENST00000263309 KRBOX1C9JBD0 128 aa9.16□□□□□ -0.94
CLNS1A-201ENST00000263309 PRAC2D3DTV9 90 aa9.16□□□□□ -0.94
CLNS1A-201ENST00000263309 J3KRW8 73 aa9.16□□□□□ -0.94
CLNS1A-201ENST00000263309 IGKV2D-40P01614 121 aaPredicted RBP9.16□□□□□ -0.94
CLNS1A-201ENST00000263309 SPART-AS1P0CW21 52 aa9.16□□□□□ -0.94
CLNS1A-201ENST00000263309 CT45A10P0DMU9 189 aa9.16□□□□□ -0.94
CLNS1A-201ENST00000263309 DEFB1P60022 68 aa9.16□□□□□ -0.94
CLNS1A-201ENST00000263309 ERCC8Q13216 396 aa9.16□□□□□ -0.94
CLNS1A-201ENST00000263309 FAM159AQ6UWV7 190 aa9.16□□□□□ -0.94
CLNS1A-201ENST00000263309 C11orf45Q8TAV5 145 aa9.16□□□□□ -0.94
CLNS1A-201ENST00000263309 PYGO2Q9BRQ0 406 aa9.16□□□□□ -0.94
CLNS1A-201ENST00000263309 RETNQ9HD89 108 aa9.16□□□□□ -0.94
CLNS1A-201ENST00000263309 TREM1Q9NP99 234 aa9.16□□□□□ -0.94
CLNS1A-201ENST00000263309 GNG13Q9P2W3 67 aa9.16□□□□□ -0.94
CLNS1A-201ENST00000263309 TRAV12-2A0A075B6T6 113 aa9.15□□□□□ -0.94
CLNS1A-201ENST00000263309 C7orf71A4D174 169 aa9.15□□□□□ -0.94
CLNS1A-201ENST00000263309 FAM74A7A6NL05 159 aa9.15□□□□□ -0.94
CLNS1A-201ENST00000263309 SNURFLB1AK76 121 aa9.15□□□□□ -0.94
CLNS1A-201ENST00000263309 C3orf84H3BNL1 204 aa9.15□□□□□ -0.94
CLNS1A-201ENST00000263309 PDE6DO43924 150 aa9.15□□□□□ -0.94
CLNS1A-201ENST00000263309 PAGE4O60829 102 aa9.15□□□□□ -0.94
CLNS1A-201ENST00000263309 EIF3GO75821 320 aaKnown RBP eCLIP9.15□□□□□ -0.94
CLNS1A-201ENST00000263309 FLI1Q01543 452 aaPredicted RBP9.15□□□□□ -0.94
CLNS1A-201ENST00000263309 ZNF726P1Q15940 193 aa9.15□□□□□ -0.94
CLNS1A-201ENST00000263309 TMEM75Q8N9X5 138 aa9.15□□□□□ -0.94
CLNS1A-201ENST00000263309 C16orf74Q96GX8 76 aa9.15□□□□□ -0.94
CLNS1A-201ENST00000263309 FMC1Q96HJ9 113 aa9.15□□□□□ -0.94
CLNS1A-201ENST00000263309 KCNS1Q96KK3 526 aa9.15□□□□□ -0.94
CLNS1A-201ENST00000263309 C11orf68Q9H3H3 251 aaKnown RBP9.15□□□□□ -0.94
CLNS1A-201ENST00000263309 TMPRSS5Q9H3S3 457 aa9.15□□□□□ -0.94
CLNS1A-201ENST00000263309 ZFP30Q9Y2G7 519 aa9.15□□□□□ -0.94
CLNS1A-201ENST00000263309 DNAH3Q8TD57 4116 aa9.14□□□□□ -0.95
CLNS1A-201ENST00000263309 TRAV12-3A0A0B4J271 114 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 436 ms