RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 LINC00473A8K010 186 aa12.74□□□□□ -0.37
SHANK3-201ENST00000262795 HOXB4P17483 251 aaPredicted RBP12.74□□□□□ -0.37
SHANK3-201ENST00000262795 GVINP1Q7Z2Y8 2422 aa12.74□□□□□ -0.37
SHANK3-201ENST00000262795 RNF183Q96D59 192 aa12.74□□□□□ -0.37
SHANK3-201ENST00000262795 PIP4P1Q86T03 277 aa12.73□□□□□ -0.37
SHANK3-201ENST00000262795 IGLV10-54A0A075B6I4 117 aa12.73□□□□□ -0.37
SHANK3-201ENST00000262795 TEX36Q5VZQ5 186 aa12.72□□□□□ -0.37
SHANK3-201ENST00000262795 GFI1Q99684 422 aa12.72□□□□□ -0.37
SHANK3-201ENST00000262795 MYLKQ15746 1914 aa12.72□□□□□ -0.37
SHANK3-201ENST00000262795 RASL11AQ6T310 242 aa12.72□□□□□ -0.37
SHANK3-201ENST00000262795 TRAV12-1A0A0B4J245 112 aa12.72□□□□□ -0.37
SHANK3-201ENST00000262795 OCC1Q8TAD7 63 aa12.72□□□□□ -0.37
SHANK3-201ENST00000262795 ZGRF1Q86YA3 2104 aa12.72□□□□□ -0.37
SHANK3-201ENST00000262795 C4orf48Q5BLP8 95 aa12.72□□□□□ -0.37
SHANK3-201ENST00000262795 FAM90A2PQ658T7 463 aa12.71□□□□□ -0.37
SHANK3-201ENST00000262795 VCYO14598 125 aa12.71□□□□□ -0.37
SHANK3-201ENST00000262795 LRRK1Q38SD2 2015 aa12.71□□□□□ -0.37
SHANK3-201ENST00000262795 HIST2H2BDQ6DRA6 164 aa12.71□□□□□ -0.38
SHANK3-201ENST00000262795 CRIPAKQ8N1N5 446 aa12.71□□□□□ -0.38
SHANK3-201ENST00000262795 LY6G6EA0A0G2JKS1 128 aa12.71□□□□□ -0.38
SHANK3-201ENST00000262795 U3KQA8 63 aa12.71□□□□□ -0.38
SHANK3-201ENST00000262795 NEGR1Q7Z3B1 354 aa12.7□□□□□ -0.38
SHANK3-201ENST00000262795 TMEM243Q9BU79 118 aa12.7□□□□□ -0.38
SHANK3-201ENST00000262795 NPSP0C0P6 89 aa12.7□□□□□ -0.38
SHANK3-201ENST00000262795 ADCYAP1P18509 176 aa12.7□□□□□ -0.38
SHANK3-201ENST00000262795 SEC11AP67812 179 aa12.7□□□□□ -0.38
SHANK3-201ENST00000262795 TRGV9Q99603 122 aa12.7□□□□□ -0.38
SHANK3-201ENST00000262795 DYSFO75923 2080 aa12.7□□□□□ -0.38
SHANK3-201ENST00000262795 DEFB135Q30KP9 77 aa12.7□□□□□ -0.38
SHANK3-201ENST00000262795 IGFL3Q6UXB1 125 aa12.7□□□□□ -0.38
SHANK3-201ENST00000262795 KLF12Q9Y4X4 402 aa12.7□□□□□ -0.38
SHANK3-201ENST00000262795 ARMS2P0C7Q2 107 aa12.69□□□□□ -0.38
SHANK3-201ENST00000262795 DIAPH2-AS1Q14236 149 aa12.69□□□□□ -0.38
SHANK3-201ENST00000262795 C9JAW5 83 aa12.69□□□□□ -0.38
SHANK3-201ENST00000262795 TREML4Q6UXN2 200 aa12.69□□□□□ -0.38
SHANK3-201ENST00000262795 RNF144BQ7Z419 303 aa12.69□□□□□ -0.38
SHANK3-201ENST00000262795 RNF138Q8WVD3 245 aa12.69□□□□□ -0.38
SHANK3-201ENST00000262795 LIME1Q9H400 295 aa12.69□□□□□ -0.38
SHANK3-201ENST00000262795 THSD7BQ9C0I4 1608 aa12.69□□□□□ -0.38
SHANK3-201ENST00000262795 WNK2Q9Y3S1 2297 aa12.69□□□□□ -0.38
SHANK3-201ENST00000262795 IGFBP3P17936 291 aaPredicted RBP12.69□□□□□ -0.38
SHANK3-201ENST00000262795 BCL6BQ8N143 479 aaPredicted RBP12.69□□□□□ -0.38
SHANK3-201ENST00000262795 Q8NFD4 153 aa12.69□□□□□ -0.38
SHANK3-201ENST00000262795 TMEM242Q9NWH2 141 aa12.69□□□□□ -0.38
SHANK3-201ENST00000262795 SIPA1L1O43166 1804 aa12.69□□□□□ -0.38
SHANK3-201ENST00000262795 IGHV2-5P01817 119 aa12.69□□□□□ -0.38
SHANK3-201ENST00000262795 TIRAPP58753 221 aa12.69□□□□□ -0.38
SHANK3-201ENST00000262795 ZNF503Q96F45 646 aa12.69□□□□□ -0.38
SHANK3-201ENST00000262795 TRAV26-2A0A0B4J265 109 aa12.68□□□□□ -0.38
SHANK3-201ENST00000262795 RNF5Q99942 180 aa12.68□□□□□ -0.38
SHANK3-201ENST00000262795 TRAV9-1A0A075B6T8 112 aa12.68□□□□□ -0.38
SHANK3-201ENST00000262795 FGF16O43320 207 aa12.68□□□□□ -0.38
SHANK3-201ENST00000262795 FANCD2OSQ96PS1 177 aa12.68□□□□□ -0.38
SHANK3-201ENST00000262795 C17orf82Q86X59 251 aaPredicted RBP12.68□□□□□ -0.38
SHANK3-201ENST00000262795 RBM3P98179 157 aaKnown RBP12.68□□□□□ -0.38
SHANK3-201ENST00000262795 SMIM2Q9BVW6 85 aa12.68□□□□□ -0.38
SHANK3-201ENST00000262795 TPSG1Q9NRR2 321 aa12.68□□□□□ -0.38
SHANK3-201ENST00000262795 PTPRDP23468 1912 aa12.68□□□□□ -0.38
SHANK3-201ENST00000262795 RBMY1FQ15415 496 aaKnown RBP12.68□□□□□ -0.38
SHANK3-201ENST00000262795 FAM215AQ9Y5M1 114 aa12.68□□□□□ -0.38
SHANK3-201ENST00000262795 SMAD5-AS1Q9Y6J3 95 aa12.68□□□□□ -0.38
SHANK3-201ENST00000262795 NACAE9PAV3 2078 aa12.68□□□□□ -0.38
SHANK3-201ENST00000262795 A0A1W2PPI3 338 aa12.67□□□□□ -0.38
SHANK3-201ENST00000262795 PRR25Q96S07 402 aa12.67□□□□□ -0.38
SHANK3-201ENST00000262795 TIMM21Q9BVV7 248 aa12.67□□□□□ -0.38
SHANK3-201ENST00000262795 CYTL1Q9NRR1 136 aa12.67□□□□□ -0.38
SHANK3-201ENST00000262795 HELZP42694 1942 aaKnown RBP12.67□□□□□ -0.38
SHANK3-201ENST00000262795 BUB3O43684 328 aa12.67□□□□□ -0.38
SHANK3-201ENST00000262795 Q6P435 159 aa12.67□□□□□ -0.38
SHANK3-201ENST00000262795 C1orf194Q5T5A4 169 aa12.67□□□□□ -0.38
SHANK3-201ENST00000262795 hADV29S1A0JD25 119 aa12.67□□□□□ -0.38
SHANK3-201ENST00000262795 F6UB75 175 aa12.67□□□□□ -0.38
SHANK3-201ENST00000262795 GTSF1Q8WW33 167 aa12.66□□□□□ -0.38
SHANK3-201ENST00000262795 TSC2P49815 1807 aa12.66□□□□□ -0.38
SHANK3-201ENST00000262795 IGHV1OR15-1A0A075B7D0 117 aa12.66□□□□□ -0.38
SHANK3-201ENST00000262795 M0R2N4 97 aa12.66□□□□□ -0.38
SHANK3-201ENST00000262795 HSD52Q0P140 79 aa12.66□□□□□ -0.38
SHANK3-201ENST00000262795 MPV17L2Q567V2 206 aa12.66□□□□□ -0.38
SHANK3-201ENST00000262795 SCRT2Q9NQ03 307 aa12.66□□□□□ -0.38
SHANK3-201ENST00000262795 CDKN1BP46527 198 aa12.66□□□□□ -0.38
SHANK3-201ENST00000262795 UBE2V1Q13404 147 aa12.66□□□□□ -0.38
SHANK3-201ENST00000262795 TRPT1Q86TN4 253 aaKnown RBP12.66□□□□□ -0.38
SHANK3-201ENST00000262795 GNB1LQ9BYB4 327 aa12.66□□□□□ -0.38
SHANK3-201ENST00000262795 TMEM14BQ9NUH8 114 aa12.66□□□□□ -0.38
SHANK3-201ENST00000262795 ADORA2A-AS1P86434 159 aa12.65□□□□□ -0.38
SHANK3-201ENST00000262795 PLXNA4Q9HCM2 1894 aa12.65□□□□□ -0.38
SHANK3-201ENST00000262795 A0A1B0GW64 132 aa12.65□□□□□ -0.38
SHANK3-201ENST00000262795 KIR3DS1Q14943 382 aa12.65□□□□□ -0.38
SHANK3-201ENST00000262795 IFITM1P13164 125 aa12.65□□□□□ -0.38
SHANK3-201ENST00000262795 U3KQE9 123 aa12.65□□□□□ -0.39
SHANK3-201ENST00000262795 PLXNA3P51805 1871 aa12.65□□□□□ -0.39
SHANK3-201ENST00000262795 VWA8A3KMH1 1905 aa12.64□□□□□ -0.39
SHANK3-201ENST00000262795 WFDC11Q8NEX6 87 aa12.64□□□□□ -0.39
SHANK3-201ENST00000262795 GUSBP1Q15486 140 aa12.64□□□□□ -0.39
SHANK3-201ENST00000262795 IFI27L1Q96BM0 104 aa12.64□□□□□ -0.39
SHANK3-201ENST00000262795 FAM110AQ9BQ89 295 aa12.64□□□□□ -0.39
SHANK3-201ENST00000262795 A0A1W2PRE2 83 aa12.64□□□□□ -0.39
SHANK3-201ENST00000262795 SHISA9B4DS77 424 aa12.64□□□□□ -0.39
SHANK3-201ENST00000262795 SPRY2O43597 315 aa12.64□□□□□ -0.39
SHANK3-201ENST00000262795 PROP1O75360 226 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 166.8 ms