RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 RMI2Q96E14 147 aa11.47□□□□□ -0.57
CUX2-201ENST00000261726 YLPM1P49750 1951 aaKnown RBP11.47□□□□□ -0.57
CUX2-201ENST00000261726 PTPRDP23468 1912 aa11.47□□□□□ -0.57
CUX2-201ENST00000261726 IGKV1OR2-108A0A075B7D4 117 aa11.47□□□□□ -0.57
CUX2-201ENST00000261726 SDHAF1A6NFY7 115 aa11.47□□□□□ -0.57
CUX2-201ENST00000261726 PDE6HQ13956 83 aa11.47□□□□□ -0.57
CUX2-201ENST00000261726 FAM186AA6NE01 2351 aa11.47□□□□□ -0.57
CUX2-201ENST00000261726 CRYGCP07315 174 aa11.47□□□□□ -0.57
CUX2-201ENST00000261726 PRSS46E5RG02 174 aa11.47□□□□□ -0.57
CUX2-201ENST00000261726 TRACP01848 142 aa11.47□□□□□ -0.57
CUX2-201ENST00000261726 TANC1Q9C0D5 1861 aa11.47□□□□□ -0.57
CUX2-201ENST00000261726 E9PQ18 207 aa11.46□□□□□ -0.57
CUX2-201ENST00000261726 PRB2P02812 416 aaPredicted RBP11.46□□□□□ -0.57
CUX2-201ENST00000261726 C8orf86Q6ZUL3 223 aa11.46□□□□□ -0.57
CUX2-201ENST00000261726 INTS1Q8N201 2190 aaKnown RBP11.46□□□□□ -0.57
CUX2-201ENST00000261726 IGKV2D-24A0A075B6R9 120 aa11.46□□□□□ -0.57
CUX2-201ENST00000261726 TEX36Q5VZQ5 186 aa11.46□□□□□ -0.57
CUX2-201ENST00000261726 ALPK2Q86TB3 2170 aa11.46□□□□□ -0.58
CUX2-201ENST00000261726 NDUFA12Q9UI09 145 aa11.46□□□□□ -0.58
CUX2-201ENST00000261726 IGHV4-4A0A075B6R2 117 aa11.46□□□□□ -0.58
CUX2-201ENST00000261726 GAS1P54826 345 aa11.46□□□□□ -0.58
CUX2-201ENST00000261726 Q6ZRM9 215 aa11.46□□□□□ -0.58
CUX2-201ENST00000261726 THADAQ6YHU6 1953 aa11.46□□□□□ -0.58
CUX2-201ENST00000261726 IGHV1-69DA0A0B4J2H0 117 aa11.46□□□□□ -0.58
CUX2-201ENST00000261726 A0A0J9YY99 117 aa11.46□□□□□ -0.58
CUX2-201ENST00000261726 IGHV1-69P01742 117 aa11.46□□□□□ -0.58
CUX2-201ENST00000261726 TSSC4Q9Y5U2 329 aaPredicted RBP11.46□□□□□ -0.58
CUX2-201ENST00000261726 UBE2E1P51965 193 aa11.45□□□□□ -0.58
CUX2-201ENST00000261726 CT83Q5H943 113 aa11.45□□□□□ -0.58
CUX2-201ENST00000261726 MRPL51Q4U2R6 128 aaKnown RBP11.45□□□□□ -0.58
CUX2-201ENST00000261726 LRRK1Q38SD2 2015 aa11.45□□□□□ -0.58
CUX2-201ENST00000261726 SRSF8Q9BRL6 282 aaKnown RBP11.45□□□□□ -0.58
CUX2-201ENST00000261726 FAM104BQ5XKR9 115 aa11.45□□□□□ -0.58
CUX2-201ENST00000261726 POLR3KQ9Y2Y1 108 aaPredicted RBP11.45□□□□□ -0.58
CUX2-201ENST00000261726 CEP290O15078 2479 aa11.45□□□□□ -0.58
CUX2-201ENST00000261726 ASPHD1Q5U4P2 390 aa11.44□□□□□ -0.58
CUX2-201ENST00000261726 Q9HAA7 133 aa11.44□□□□□ -0.58
CUX2-201ENST00000261726 DKK4Q9UBT3 224 aa11.44□□□□□ -0.58
CUX2-201ENST00000261726 FREM3P0C091 2139 aa11.44□□□□□ -0.58
CUX2-201ENST00000261726 CDKN1BP46527 198 aa11.44□□□□□ -0.58
CUX2-201ENST00000261726 CYYR1Q96J86 154 aa11.44□□□□□ -0.58
CUX2-201ENST00000261726 CARD19Q96LW7 228 aa11.44□□□□□ -0.58
CUX2-201ENST00000261726 ZMAT4Q9H898 229 aa11.44□□□□□ -0.58
CUX2-201ENST00000261726 TRBV6-6A0A0A6YYG2 114 aa11.44□□□□□ -0.58
CUX2-201ENST00000261726 IGLV2-23P01705 113 aa11.44□□□□□ -0.58
CUX2-201ENST00000261726 UTF1Q5T230 341 aa11.44□□□□□ -0.58
CUX2-201ENST00000261726 COL4A6Q14031 1691 aa11.44□□□□□ -0.58
CUX2-201ENST00000261726 NBL1P41271 181 aa11.43□□□□□ -0.58
CUX2-201ENST00000261726 XCL1P47992 114 aa11.43□□□□□ -0.58
CUX2-201ENST00000261726 IFITM1P13164 125 aa11.43□□□□□ -0.58
CUX2-201ENST00000261726 SLAQ13239 276 aa11.43□□□□□ -0.58
CUX2-201ENST00000261726 TRBV20-1A0A075B6N2 111 aa11.43□□□□□ -0.58
CUX2-201ENST00000261726 REG4Q9BYZ8 158 aa11.43□□□□□ -0.58
CUX2-201ENST00000261726 Q6ZQT7 251 aa11.43□□□□□ -0.58
CUX2-201ENST00000261726 C18orf32Q8TCD1 76 aa11.43□□□□□ -0.58
CUX2-201ENST00000261726 CR1LQ2VPA4 569 aa11.43□□□□□ -0.58
CUX2-201ENST00000261726 RPL18AQ02543 176 aaKnown RBP11.42□□□□□ -0.58
CUX2-201ENST00000261726 GATA3P23771 443 aa11.42□□□□□ -0.58
CUX2-201ENST00000261726 FNDC10F2Z333 226 aa11.42□□□□□ -0.58
CUX2-201ENST00000261726 PPDPFLQ8WWR9 84 aa11.42□□□□□ -0.58
CUX2-201ENST00000261726 ZNF492Q9P255 531 aa11.42□□□□□ -0.58
CUX2-201ENST00000261726 DOCK6Q96HP0 2047 aa11.42□□□□□ -0.58
CUX2-201ENST00000261726 TRBV19A0A075B6N1 114 aa11.41□□□□□ -0.58
CUX2-201ENST00000261726 TRAV13-2A0A0B4J235 113 aa11.41□□□□□ -0.58
CUX2-201ENST00000261726 C9orf118A6NHY6 69 aa11.41□□□□□ -0.58
CUX2-201ENST00000261726 K7ERJ3 54 aa11.41□□□□□ -0.58
CUX2-201ENST00000261726 MYLKQ15746 1914 aa11.41□□□□□ -0.58
CUX2-201ENST00000261726 SPTA1P02549 2419 aa11.41□□□□□ -0.58
CUX2-201ENST00000261726 B3GALT5-AS1P59052 145 aa11.41□□□□□ -0.58
CUX2-201ENST00000261726 ARFGEF3Q5TH69 2177 aa11.41□□□□□ -0.58
CUX2-201ENST00000261726 DIDO1Q9BTC0 2240 aaKnown RBP11.41□□□□□ -0.58
CUX2-201ENST00000261726 IGHV4-28A0A0C4DH34 117 aa11.41□□□□□ -0.58
CUX2-201ENST00000261726 EGR2P11161 476 aaPredicted RBP11.41□□□□□ -0.58
CUX2-201ENST00000261726 QRFPP83859 136 aa11.41□□□□□ -0.58
CUX2-201ENST00000261726 SDK2Q58EX2 2172 aa11.41□□□□□ -0.58
CUX2-201ENST00000261726 IGHV1-24A0A0C4DH33 117 aa11.4□□□□□ -0.58
CUX2-201ENST00000261726 IGHV2-70DA0A0C4DH43 119 aa11.4□□□□□ -0.58
CUX2-201ENST00000261726 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.4□□□□□ -0.58
CUX2-201ENST00000261726 RBM3P98179 157 aaKnown RBP11.4□□□□□ -0.58
CUX2-201ENST00000261726 DUX4L9Q6RFH8 374 aaPredicted RBP11.4□□□□□ -0.58
CUX2-201ENST00000261726 CHKB-CPT1BH3BT56 60 aa11.4□□□□□ -0.58
CUX2-201ENST00000261726 YPEL3P61236 119 aaPredicted RBP11.4□□□□□ -0.58
CUX2-201ENST00000261726 CFHR4Q92496 578 aa11.4□□□□□ -0.58
CUX2-201ENST00000261726 MYO7BQ6PIF6 2116 aa11.4□□□□□ -0.58
CUX2-201ENST00000261726 WIPF3A6NGB9 483 aa11.4□□□□□ -0.58
CUX2-201ENST00000261726 NOP10Q9NPE3 64 aaKnown RBP11.4□□□□□ -0.58
CUX2-201ENST00000261726 SHISA9B4DS77 424 aa11.4□□□□□ -0.59
CUX2-201ENST00000261726 CEP250Q9BV73 2442 aa11.39□□□□□ -0.59
CUX2-201ENST00000261726 PI4KAP42356 2102 aa11.39□□□□□ -0.59
CUX2-201ENST00000261726 Q6ZS92 163 aa11.39□□□□□ -0.59
CUX2-201ENST00000261726 CEND1Q8N111 149 aa11.39□□□□□ -0.59
CUX2-201ENST00000261726 Q0VG73 95 aa11.39□□□□□ -0.59
CUX2-201ENST00000261726 ETDBQ3ZM63 59 aa11.39□□□□□ -0.59
CUX2-201ENST00000261726 NDUFA4L2Q9NRX3 87 aa11.39□□□□□ -0.59
CUX2-201ENST00000261726 CRYBA4P53673 196 aa11.39□□□□□ -0.59
CUX2-201ENST00000261726 HERVK_113P63121 156 aa11.39□□□□□ -0.59
CUX2-201ENST00000261726 TMEM14BQ9NUH8 114 aa11.39□□□□□ -0.59
CUX2-201ENST00000261726 MRPL35Q9NZE8 188 aaKnown RBP11.39□□□□□ -0.59
CUX2-201ENST00000261726 PRO1854Q9UHT4 67 aa11.39□□□□□ -0.59
CUX2-201ENST00000261726 PLXNA4Q9HCM2 1894 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms