RNA–Protein interactions for RNA: ENST00000253814.5

NDFIP1-201, Transcript of Nedd4 family interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP1, Length 3,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-201ENST00000253814 SAP30O75446 220 aa13.9□□□□□ -0.18
NDFIP1-201ENST00000253814 IGKV1-17P01599 117 aa13.9□□□□□ -0.18
NDFIP1-201ENST00000253814 OR1N2Q8NGR9 330 aa13.9□□□□□ -0.18
NDFIP1-201ENST00000253814 NXT2Q9NPJ8 142 aaKnown RBP13.9□□□□□ -0.18
NDFIP1-201ENST00000253814 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.9□□□□□ -0.18
NDFIP1-201ENST00000253814 PAX1P15863 534 aa13.9□□□□□ -0.18
NDFIP1-201ENST00000253814 MRPL16Q9NX20 251 aaKnown RBP13.9□□□□□ -0.18
NDFIP1-201ENST00000253814 K7EMI3 77 aa13.9□□□□□ -0.18
NDFIP1-201ENST00000253814 ZNF491Q8N8L2 437 aa13.9□□□□□ -0.18
NDFIP1-201ENST00000253814 GTSF1LQ9H1H1 148 aa13.9□□□□□ -0.18
NDFIP1-201ENST00000253814 MYO9AB2RTY4 2548 aa13.9□□□□□ -0.18
NDFIP1-201ENST00000253814 FAM106AQ4KMX7 169 aa13.9□□□□□ -0.19
NDFIP1-201ENST00000253814 JMJD8Q96S16 334 aa13.9□□□□□ -0.19
NDFIP1-201ENST00000253814 VGLL1Q99990 258 aa13.9□□□□□ -0.19
NDFIP1-201ENST00000253814 MBD6Q96DN6 1003 aa13.89□□□□□ -0.19
NDFIP1-201ENST00000253814 NACAE9PAV3 2078 aa13.89□□□□□ -0.19
NDFIP1-201ENST00000253814 NEU4Q8WWR8 484 aaPredicted RBP13.89□□□□□ -0.19
NDFIP1-201ENST00000253814 MSRB1Q9NZV6 116 aa13.89□□□□□ -0.19
NDFIP1-201ENST00000253814 TRAV40A0A0B4J280 105 aa13.89□□□□□ -0.19
NDFIP1-201ENST00000253814 Q8N976 141 aa13.89□□□□□ -0.19
NDFIP1-201ENST00000253814 ZNF479Q96JC4 524 aa13.89□□□□□ -0.19
NDFIP1-201ENST00000253814 VWC2LB2RUY7 222 aa13.88□□□□□ -0.19
NDFIP1-201ENST00000253814 PPBPP02775 128 aa13.88□□□□□ -0.19
NDFIP1-201ENST00000253814 HERVK_113P61574 105 aa13.88□□□□□ -0.19
NDFIP1-201ENST00000253814 LOXL1Q08397 574 aaPredicted RBP13.88□□□□□ -0.19
NDFIP1-201ENST00000253814 LINC00311Q8N616 119 aa13.88□□□□□ -0.19
NDFIP1-201ENST00000253814 K7ERJ3 54 aa13.88□□□□□ -0.19
NDFIP1-201ENST00000253814 TNFRSF6BO95407 300 aa13.88□□□□□ -0.19
NDFIP1-201ENST00000253814 IGLV2-23P01705 113 aa13.88□□□□□ -0.19
NDFIP1-201ENST00000253814 GATA1P15976 413 aaPredicted RBP13.88□□□□□ -0.19
NDFIP1-201ENST00000253814 LYPD1Q8N2G4 141 aa13.88□□□□□ -0.19
NDFIP1-201ENST00000253814 TRAV26-2A0A0B4J265 109 aa13.87□□□□□ -0.19
NDFIP1-201ENST00000253814 K7EP13 123 aa13.87□□□□□ -0.19
NDFIP1-201ENST00000253814 TMEM170BQ5T4T1 132 aa13.87□□□□□ -0.19
NDFIP1-201ENST00000253814 PRR25Q96S07 402 aa13.87□□□□□ -0.19
NDFIP1-201ENST00000253814 CYSLTR1Q9Y271 337 aa13.87□□□□□ -0.19
NDFIP1-201ENST00000253814 RAXQ9Y2V3 346 aa13.87□□□□□ -0.19
NDFIP1-201ENST00000253814 TRGV3P03979 118 aa13.87□□□□□ -0.19
NDFIP1-201ENST00000253814 SPATA12Q7Z6I5 190 aa13.87□□□□□ -0.19
NDFIP1-201ENST00000253814 TMEM219Q86XT9 240 aa13.87□□□□□ -0.19
NDFIP1-201ENST00000253814 ATP5G2Q06055 141 aa13.87□□□□□ -0.19
NDFIP1-201ENST00000253814 SAMD13Q5VXD3 122 aa13.87□□□□□ -0.19
NDFIP1-201ENST00000253814 A0A1B0GXF2 115 aa13.86□□□□□ -0.19
NDFIP1-201ENST00000253814 SPRY2O43597 315 aa13.86□□□□□ -0.19
NDFIP1-201ENST00000253814 SRD5A1P18405 259 aa13.86□□□□□ -0.19
NDFIP1-201ENST00000253814 EEF1AKMT3Q96AZ1 226 aa13.86□□□□□ -0.19
NDFIP1-201ENST00000253814 CHAC1Q9BUX1 264 aa13.86□□□□□ -0.19
NDFIP1-201ENST00000253814 SCRT2Q9NQ03 307 aa13.86□□□□□ -0.19
NDFIP1-201ENST00000253814 KLF12Q9Y4X4 402 aa13.86□□□□□ -0.19
NDFIP1-201ENST00000253814 H3BRN7 92 aa13.86□□□□□ -0.19
NDFIP1-201ENST00000253814 EGR2P11161 476 aaPredicted RBP13.86□□□□□ -0.19
NDFIP1-201ENST00000253814 CDKN1BP46527 198 aa13.86□□□□□ -0.19
NDFIP1-201ENST00000253814 EMP1P54849 157 aa13.86□□□□□ -0.19
NDFIP1-201ENST00000253814 C9orf118A6NHY6 69 aa13.85□□□□□ -0.19
NDFIP1-201ENST00000253814 VMO1Q7Z5L0 202 aa13.85□□□□□ -0.19
NDFIP1-201ENST00000253814 OR5A1Q8NGJ0 315 aa13.85□□□□□ -0.19
NDFIP1-201ENST00000253814 TMEM8BA6NDV4 472 aa13.85□□□□□ -0.19
NDFIP1-201ENST00000253814 FREM2Q5SZK8 3169 aa13.85□□□□□ -0.19
NDFIP1-201ENST00000253814 Q5PR19 223 aa13.85□□□□□ -0.19
NDFIP1-201ENST00000253814 RUSC1-AS1Q66K80 236 aa13.85□□□□□ -0.19
NDFIP1-201ENST00000253814 SIGLEC15Q6ZMC9 328 aa13.85□□□□□ -0.19
NDFIP1-201ENST00000253814 COL4A2P08572 1712 aa13.84□□□□□ -0.19
NDFIP1-201ENST00000253814 RNASE4P34096 147 aaKnown RBP13.84□□□□□ -0.19
NDFIP1-201ENST00000253814 RAB9AP51151 201 aa13.84□□□□□ -0.19
NDFIP1-201ENST00000253814 IL17RELQ6ZVW7 336 aa13.84□□□□□ -0.19
NDFIP1-201ENST00000253814 TMEM14CQ9P0S9 112 aa13.84□□□□□ -0.19
NDFIP1-201ENST00000253814 C19orf71A6NCJ1 209 aa13.84□□□□□ -0.19
NDFIP1-201ENST00000253814 CD300EQ496F6 205 aaPredicted RBP13.84□□□□□ -0.19
NDFIP1-201ENST00000253814 NDUFS7O75251 213 aa13.84□□□□□ -0.19
NDFIP1-201ENST00000253814 PRSS2P07478 247 aa13.84□□□□□ -0.19
NDFIP1-201ENST00000253814 LINC01545Q5VT33 79 aa13.84□□□□□ -0.19
NDFIP1-201ENST00000253814 TMEM238LA0A1B0GVL6 79 aa13.83□□□□□ -0.2
NDFIP1-201ENST00000253814 A6NJY4 79 aa13.83□□□□□ -0.2
NDFIP1-201ENST00000253814 BEX4Q9NWD9 120 aaPredicted RBP13.83□□□□□ -0.2
NDFIP1-201ENST00000253814 H3BRM9 83 aa13.83□□□□□ -0.2
NDFIP1-201ENST00000253814 K7EIM0 57 aa13.83□□□□□ -0.2
NDFIP1-201ENST00000253814 MLST8Q9BVC4 326 aa13.83□□□□□ -0.2
NDFIP1-201ENST00000253814 SRSF1Q07955 248 aaKnown RBP eCLIP13.82□□□□□ -0.2
NDFIP1-201ENST00000253814 LAGE3Q14657 143 aa13.82□□□□□ -0.2
NDFIP1-201ENST00000253814 LGALS9BQ3B8N2 356 aa13.82□□□□□ -0.2
NDFIP1-201ENST00000253814 LGALS9CQ6DKI2 356 aa13.82□□□□□ -0.2
NDFIP1-201ENST00000253814 I3L2K1 104 aa13.82□□□□□ -0.2
NDFIP1-201ENST00000253814 IGFL2Q6UWQ7 119 aa13.82□□□□□ -0.2
NDFIP1-201ENST00000253814 ZNF256Q9Y2P7 627 aaPredicted RBP13.82□□□□□ -0.2
NDFIP1-201ENST00000253814 SETD2Q9BYW2 2564 aaPredicted RBP13.82□□□□□ -0.2
NDFIP1-201ENST00000253814 G3V318 75 aa13.82□□□□□ -0.2
NDFIP1-201ENST00000253814 THBDP07204 575 aa13.82□□□□□ -0.2
NDFIP1-201ENST00000253814 EFNA4P52798 201 aa13.82□□□□□ -0.2
NDFIP1-201ENST00000253814 C14orf178Q8N769 122 aaPredicted RBP13.82□□□□□ -0.2
NDFIP1-201ENST00000253814 ASIPP42127 132 aa13.81□□□□□ -0.2
NDFIP1-201ENST00000253814 PAX2Q02962 417 aa13.81□□□□□ -0.2
NDFIP1-201ENST00000253814 PDE6HQ13956 83 aa13.81□□□□□ -0.2
NDFIP1-201ENST00000253814 AMTNQ6UX39 209 aa13.81□□□□□ -0.2
NDFIP1-201ENST00000253814 PRSS22Q9GZN4 317 aa13.81□□□□□ -0.2
NDFIP1-201ENST00000253814 LYRM7Q5U5X0 104 aa13.81□□□□□ -0.2
NDFIP1-201ENST00000253814 ZNF562Q6V9R5 426 aa13.81□□□□□ -0.2
NDFIP1-201ENST00000253814 ADAMTSL5Q6ZMM2 481 aa13.81□□□□□ -0.2
NDFIP1-201ENST00000253814 Q71RC1 249 aaPredicted RBP13.81□□□□□ -0.2
NDFIP1-201ENST00000253814 MRPL35Q9NZE8 188 aaKnown RBP13.81□□□□□ -0.2
NDFIP1-201ENST00000253814 GRNP28799 593 aaKnown RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms