RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 SH2D1AO60880 128 aa14.44□□□□□ -0.1
PDLIM4-201ENST00000253754 PCP4P48539 62 aa14.44□□□□□ -0.1
PDLIM4-201ENST00000253754 KLK9Q2XQG4 91 aa14.44□□□□□ -0.1
PDLIM4-201ENST00000253754 KLK9Q9UKQ9 250 aa14.44□□□□□ -0.1
PDLIM4-201ENST00000253754 A0A1B0GUT8 65 aa14.44□□□□□ -0.1
PDLIM4-201ENST00000253754 RNF223E7ERA6 249 aa14.44□□□□□ -0.1
PDLIM4-201ENST00000253754 BUB3O43684 328 aa14.44□□□□□ -0.1
PDLIM4-201ENST00000253754 LY6EQ16553 131 aa14.44□□□□□ -0.1
PDLIM4-201ENST00000253754 LCN12Q6JVE5 192 aa14.44□□□□□ -0.1
PDLIM4-201ENST00000253754 RNF182Q8N6D2 247 aa14.44□□□□□ -0.1
PDLIM4-201ENST00000253754 CREBBPQ92793 2442 aa14.43□□□□□ -0.1
PDLIM4-201ENST00000253754 Q5PR19 223 aa14.43□□□□□ -0.1
PDLIM4-201ENST00000253754 EEF1AKMT3Q96AZ1 226 aa14.43□□□□□ -0.1
PDLIM4-201ENST00000253754 BORCS7Q96B45 105 aa14.43□□□□□ -0.1
PDLIM4-201ENST00000253754 FAM181BA6NEQ2 426 aa14.43□□□□□ -0.1
PDLIM4-201ENST00000253754 PRAC2D3DTV9 90 aa14.43□□□□□ -0.1
PDLIM4-201ENST00000253754 CYB5R2Q6BCY4 276 aa14.43□□□□□ -0.1
PDLIM4-201ENST00000253754 PRR25Q96S07 402 aa14.43□□□□□ -0.1
PDLIM4-201ENST00000253754 TRAV41A0A0B4J266 112 aa14.42□□□□□ -0.1
PDLIM4-201ENST00000253754 MUC21A0A0G2JKD1 596 aa14.42□□□□□ -0.1
PDLIM4-201ENST00000253754 MUC21A0A140T8X8 626 aa14.42□□□□□ -0.1
PDLIM4-201ENST00000253754 ZNF80P51504 273 aaPredicted RBP14.42□□□□□ -0.1
PDLIM4-201ENST00000253754 ZNF138P52744 262 aa14.42□□□□□ -0.1
PDLIM4-201ENST00000253754 MUC21Q5SSG8 566 aa14.42□□□□□ -0.1
PDLIM4-201ENST00000253754 EBLN2Q6P2I7 272 aa14.42□□□□□ -0.1
PDLIM4-201ENST00000253754 ATOH7Q8N100 152 aa14.42□□□□□ -0.1
PDLIM4-201ENST00000253754 BAHCC1Q9P281 2608 aa14.42□□□□□ -0.1
PDLIM4-201ENST00000253754 ERCC8Q13216 396 aa14.41□□□□□ -0.1
PDLIM4-201ENST00000253754 LRRC75A-AS1Q8N1F1 130 aa14.41□□□□□ -0.1
PDLIM4-201ENST00000253754 CLEC5AQ9NY25 188 aa14.41□□□□□ -0.1
PDLIM4-201ENST00000253754 PRRC2AP48634 2157 aaKnown RBP14.41□□□□□ -0.1
PDLIM4-201ENST00000253754 SERTM2A0A1B0GWG4 89 aa14.41□□□□□ -0.1
PDLIM4-201ENST00000253754 FAM162BQ5T6X4 162 aa14.41□□□□□ -0.1
PDLIM4-201ENST00000253754 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.41□□□□□ -0.1
PDLIM4-201ENST00000253754 LINC01356Q8N9X3 169 aa14.41□□□□□ -0.1
PDLIM4-201ENST00000253754 C20orf144Q9BQM9 153 aa14.41□□□□□ -0.1
PDLIM4-201ENST00000253754 ITPR3Q14573 2671 aa14.41□□□□□ -0.1
PDLIM4-201ENST00000253754 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.4□□□□□ -0.1
PDLIM4-201ENST00000253754 TMEM189A5PLL7 270 aa14.4□□□□□ -0.1
PDLIM4-201ENST00000253754 AVPP01185 164 aa14.4□□□□□ -0.1
PDLIM4-201ENST00000253754 ZNF705AQ6ZN79 300 aaPredicted RBP14.4□□□□□ -0.1
PDLIM4-201ENST00000253754 ATP5G2Q06055 141 aa14.4□□□□□ -0.1
PDLIM4-201ENST00000253754 RIGQ13278 110 aa14.4□□□□□ -0.1
PDLIM4-201ENST00000253754 C19orf54Q5BKX5 351 aa14.4□□□□□ -0.1
PDLIM4-201ENST00000253754 LYZL1Q6UWQ5 148 aa14.4□□□□□ -0.1
PDLIM4-201ENST00000253754 SNHG12Q9BXW3 62 aa14.4□□□□□ -0.1
PDLIM4-201ENST00000253754 TEX15Q9BXT5 2789 aa14.39□□□□□ -0.11
PDLIM4-201ENST00000253754 CR1P17927 2039 aa14.39□□□□□ -0.11
PDLIM4-201ENST00000253754 TLN2Q9Y4G6 2542 aa14.39□□□□□ -0.11
PDLIM4-201ENST00000253754 TRBV7-1A0A0A6YYK4 115 aa14.39□□□□□ -0.11
PDLIM4-201ENST00000253754 TGFAP01135 160 aa14.39□□□□□ -0.11
PDLIM4-201ENST00000253754 NDFIP1Q9BT67 221 aa14.39□□□□□ -0.11
PDLIM4-201ENST00000253754 TMEM213A2RRL7 107 aa14.39□□□□□ -0.11
PDLIM4-201ENST00000253754 LOXL1Q08397 574 aaPredicted RBP14.39□□□□□ -0.11
PDLIM4-201ENST00000253754 GAGE1Q13065 139 aa14.39□□□□□ -0.11
PDLIM4-201ENST00000253754 MAJINQ3KP22 176 aa14.39□□□□□ -0.11
PDLIM4-201ENST00000253754 SPATA12Q7Z6I5 190 aa14.39□□□□□ -0.11
PDLIM4-201ENST00000253754 IGHV1-24A0A0C4DH33 117 aa14.38□□□□□ -0.11
PDLIM4-201ENST00000253754 H3BUX3 64 aa14.38□□□□□ -0.11
PDLIM4-201ENST00000253754 CSN3P07498 182 aa14.38□□□□□ -0.11
PDLIM4-201ENST00000253754 GATA3P23771 443 aa14.38□□□□□ -0.11
PDLIM4-201ENST00000253754 SAPCD1Q5SSQ6 148 aa14.38□□□□□ -0.11
PDLIM4-201ENST00000253754 LINC00173Q6ZV60 143 aa14.38□□□□□ -0.11
PDLIM4-201ENST00000253754 Q96MF0 132 aa14.38□□□□□ -0.11
PDLIM4-201ENST00000253754 MEGF9Q9H1U4 602 aa14.38□□□□□ -0.11
PDLIM4-201ENST00000253754 FLNAP21333 2647 aaKnown RBP14.38□□□□□ -0.11
PDLIM4-201ENST00000253754 C2orf70A6NJV1 201 aa14.38□□□□□ -0.11
PDLIM4-201ENST00000253754 TRBV12-3P01733 135 aa14.38□□□□□ -0.11
PDLIM4-201ENST00000253754 TRGV3P03979 118 aa14.38□□□□□ -0.11
PDLIM4-201ENST00000253754 MYO9AB2RTY4 2548 aa14.37□□□□□ -0.11
PDLIM4-201ENST00000253754 A0A087X0K7 114 aa14.37□□□□□ -0.11
PDLIM4-201ENST00000253754 SPATA45Q537H7 98 aa14.37□□□□□ -0.11
PDLIM4-201ENST00000253754 COX8CQ7Z4L0 72 aa14.37□□□□□ -0.11
PDLIM4-201ENST00000253754 MIEN1Q9BRT3 115 aa14.37□□□□□ -0.11
PDLIM4-201ENST00000253754 G0S2P27469 103 aa14.36□□□□□ -0.11
PDLIM4-201ENST00000253754 CTRLP40313 264 aa14.36□□□□□ -0.11
PDLIM4-201ENST00000253754 Q6ZS46 218 aa14.36□□□□□ -0.11
PDLIM4-201ENST00000253754 ZNF575Q86XF7 245 aa14.36□□□□□ -0.11
PDLIM4-201ENST00000253754 METTL26Q96S19 204 aa14.36□□□□□ -0.11
PDLIM4-201ENST00000253754 LINC00614P0C842 121 aa14.36□□□□□ -0.11
PDLIM4-201ENST00000253754 S100A7P31151 101 aa14.36□□□□□ -0.11
PDLIM4-201ENST00000253754 Q6AWC8 147 aa14.36□□□□□ -0.11
PDLIM4-201ENST00000253754 ACANP16112 2415 aa14.36□□□□□ -0.11
PDLIM4-201ENST00000253754 TRAV8-2A0A0B4J237 113 aa14.35□□□□□ -0.11
PDLIM4-201ENST00000253754 BLCAPP62952 87 aa14.35□□□□□ -0.11
PDLIM4-201ENST00000253754 DLEU1O43261 78 aa14.35□□□□□ -0.11
PDLIM4-201ENST00000253754 RAB9AP51151 201 aa14.35□□□□□ -0.11
PDLIM4-201ENST00000253754 IL17RELQ6ZVW7 336 aa14.35□□□□□ -0.11
PDLIM4-201ENST00000253754 KRTAP1-3Q8IUG1 177 aa14.35□□□□□ -0.11
PDLIM4-201ENST00000253754 GATD1Q8NB37 220 aa14.35□□□□□ -0.11
PDLIM4-201ENST00000253754 CHCHD1Q96BP2 118 aaKnown RBP14.35□□□□□ -0.11
PDLIM4-201ENST00000253754 OTOGQ6ZRI0 2925 aa14.35□□□□□ -0.11
PDLIM4-201ENST00000253754 UNQ9165/PRO28630Q6UXU0 137 aa14.34□□□□□ -0.11
PDLIM4-201ENST00000253754 LCNL1Q6ZST4 164 aa14.34□□□□□ -0.11
PDLIM4-201ENST00000253754 IGHV3-11P01762 117 aa14.34□□□□□ -0.11
PDLIM4-201ENST00000253754 IGHV4-31P0DP07 118 aa14.34□□□□□ -0.11
PDLIM4-201ENST00000253754 CRIP2P52943 208 aaPredicted RBP14.34□□□□□ -0.11
PDLIM4-201ENST00000253754 PRSS57Q6UWY2 283 aa14.34□□□□□ -0.11
PDLIM4-201ENST00000253754 C8orf86Q6ZUL3 223 aa14.34□□□□□ -0.11
PDLIM4-201ENST00000253754 AMN1Q8IY45 258 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms