RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 SAPCD1Q5SSQ6 148 aa11.49□□□□□ -0.57
HDHD3-201ENST00000238379 Q8TAT8 98 aa11.49□□□□□ -0.57
HDHD3-201ENST00000238379 DCANP1Q8TF63 244 aa11.49□□□□□ -0.57
HDHD3-201ENST00000238379 DLX4Q92988 240 aaPredicted RBP11.49□□□□□ -0.57
HDHD3-201ENST00000238379 RAX2Q96IS3 184 aa11.49□□□□□ -0.57
HDHD3-201ENST00000238379 C8orf49Q96NF6 230 aa11.49□□□□□ -0.57
HDHD3-201ENST00000238379 A0A1W2PRX2 142 aa11.48□□□□□ -0.57
HDHD3-201ENST00000238379 CA1P00915 261 aaPredicted RBP11.48□□□□□ -0.57
HDHD3-201ENST00000238379 CRIP1P50238 77 aa11.48□□□□□ -0.57
HDHD3-201ENST00000238379 FHL3Q13643 280 aa11.48□□□□□ -0.57
HDHD3-201ENST00000238379 GBGT1Q8N5D6 347 aa11.48□□□□□ -0.57
HDHD3-201ENST00000238379 OR9G4Q8NGQ1 327 aa11.48□□□□□ -0.57
HDHD3-201ENST00000238379 SMIM27A0A1W2PRY6 76 aa11.47□□□□□ -0.57
HDHD3-201ENST00000238379 TYMSP04818 313 aa11.47□□□□□ -0.57
HDHD3-201ENST00000238379 ZNF738Q8NE65 137 aa11.47□□□□□ -0.57
HDHD3-201ENST00000238379 AGPAT4-IT1Q9H0P7 198 aa11.47□□□□□ -0.57
HDHD3-201ENST00000238379 C2CD3Q4AC94 2353 aa11.47□□□□□ -0.57
HDHD3-201ENST00000238379 TRAV9-1A0A075B6T8 112 aa11.46□□□□□ -0.57
HDHD3-201ENST00000238379 NPIPB6E9PJ23 425 aa11.46□□□□□ -0.57
HDHD3-201ENST00000238379 C9orf47Q6ZRZ4 202 aa11.46□□□□□ -0.57
HDHD3-201ENST00000238379 DAZAP1Q96EP5 407 aaKnown RBP11.46□□□□□ -0.57
HDHD3-201ENST00000238379 GPR61Q9BZJ8 451 aa11.46□□□□□ -0.57
HDHD3-201ENST00000238379 MS4A6AQ9H2W1 248 aa11.46□□□□□ -0.57
HDHD3-201ENST00000238379 SRD5A3Q9H8P0 318 aa11.46□□□□□ -0.57
HDHD3-201ENST00000238379 PEMTQ9UBM1 199 aa11.46□□□□□ -0.57
HDHD3-201ENST00000238379 C1orf196B1AJZ1 125 aa11.46□□□□□ -0.58
HDHD3-201ENST00000238379 M0QZ24 198 aa11.46□□□□□ -0.58
HDHD3-201ENST00000238379 CCL24O00175 119 aa11.46□□□□□ -0.58
HDHD3-201ENST00000238379 P01737 135 aa11.46□□□□□ -0.58
HDHD3-201ENST00000238379 SAMD13Q5VXD3 122 aa11.46□□□□□ -0.58
HDHD3-201ENST00000238379 BTF3L4Q96K17 158 aa11.46□□□□□ -0.58
HDHD3-201ENST00000238379 RPP21Q9H633 154 aaKnown RBP11.46□□□□□ -0.58
HDHD3-201ENST00000238379 CT83Q5H943 113 aa11.45□□□□□ -0.58
HDHD3-201ENST00000238379 PPP1R14DQ9NXH3 145 aa11.45□□□□□ -0.58
HDHD3-201ENST00000238379 OVOL1O14753 267 aa11.44□□□□□ -0.58
HDHD3-201ENST00000238379 CSN3P07498 182 aa11.44□□□□□ -0.58
HDHD3-201ENST00000238379 ZNF705DP0CH99 300 aaPredicted RBP11.44□□□□□ -0.58
HDHD3-201ENST00000238379 ZNF705BP0CI00 300 aaPredicted RBP11.44□□□□□ -0.58
HDHD3-201ENST00000238379 CT45A10P0DMU9 189 aa11.44□□□□□ -0.58
HDHD3-201ENST00000238379 ZNF138P52744 262 aa11.44□□□□□ -0.58
HDHD3-201ENST00000238379 TCL1AP56279 114 aa11.44□□□□□ -0.58
HDHD3-201ENST00000238379 TMEM78Q5T7P6 136 aa11.44□□□□□ -0.58
HDHD3-201ENST00000238379 WFDC3Q8IUB2 231 aa11.44□□□□□ -0.58
HDHD3-201ENST00000238379 ZFP82Q8N141 532 aa11.44□□□□□ -0.58
HDHD3-201ENST00000238379 TSKUQ8WUA8 353 aa11.44□□□□□ -0.58
HDHD3-201ENST00000238379 NDFIP1Q9BT67 221 aa11.44□□□□□ -0.58
HDHD3-201ENST00000238379 ADARB2-AS1A8MUL3 147 aa11.44□□□□□ -0.58
HDHD3-201ENST00000238379 K7EQG2 157 aa11.44□□□□□ -0.58
HDHD3-201ENST00000238379 TRGC2P03986 189 aa11.44□□□□□ -0.58
HDHD3-201ENST00000238379 ID1P41134 155 aa11.44□□□□□ -0.58
HDHD3-201ENST00000238379 DEFB1P60022 68 aa11.44□□□□□ -0.58
HDHD3-201ENST00000238379 RAB5BP61020 215 aa11.44□□□□□ -0.58
HDHD3-201ENST00000238379 OR4B1Q8NGF8 309 aa11.44□□□□□ -0.58
HDHD3-201ENST00000238379 CYSRT1A8MQ03 144 aa11.43□□□□□ -0.58
HDHD3-201ENST00000238379 TFPI2P48307 235 aa11.43□□□□□ -0.58
HDHD3-201ENST00000238379 ZNF80P51504 273 aaPredicted RBP11.43□□□□□ -0.58
HDHD3-201ENST00000238379 KRTAP10-3P60369 221 aa11.43□□□□□ -0.58
HDHD3-201ENST00000238379 NEU1Q99519 415 aa11.43□□□□□ -0.58
HDHD3-201ENST00000238379 A8MWL6 223 aa11.42□□□□□ -0.58
HDHD3-201ENST00000238379 PHOX2AO14813 284 aa11.42□□□□□ -0.58
HDHD3-201ENST00000238379 SMUG1Q53HV7 270 aa11.42□□□□□ -0.58
HDHD3-201ENST00000238379 FAM162BQ5T6X4 162 aa11.42□□□□□ -0.58
HDHD3-201ENST00000238379 OR2D3Q8NGH3 330 aa11.42□□□□□ -0.58
HDHD3-201ENST00000238379 IZUMO1RA6ND01 250 aa11.42□□□□□ -0.58
HDHD3-201ENST00000238379 F6UB75 175 aa11.42□□□□□ -0.58
HDHD3-201ENST00000238379 SH2D1AO60880 128 aa11.42□□□□□ -0.58
HDHD3-201ENST00000238379 OR8A1Q8NGG7 326 aa11.42□□□□□ -0.58
HDHD3-201ENST00000238379 OR10J6PQ8NGY7 276 aa11.42□□□□□ -0.58
HDHD3-201ENST00000238379 GTSF1Q8WW33 167 aa11.42□□□□□ -0.58
HDHD3-201ENST00000238379 LINC00477Q96M19 166 aa11.42□□□□□ -0.58
HDHD3-201ENST00000238379 NAT8BQ9UHF3 227 aa11.42□□□□□ -0.58
HDHD3-201ENST00000238379 LENEPQ9Y5L5 61 aa11.42□□□□□ -0.58
HDHD3-201ENST00000238379 HIGD1CA8MV81 97 aa11.41□□□□□ -0.58
HDHD3-201ENST00000238379 FRMD6-AS1P0C7T7 363 aa11.41□□□□□ -0.58
HDHD3-201ENST00000238379 NUP35Q8NFH5 326 aa11.41□□□□□ -0.58
HDHD3-201ENST00000238379 GFRA4Q9GZZ7 299 aa11.41□□□□□ -0.58
HDHD3-201ENST00000238379 NIPBLQ6KC79 2804 aaeCLIP11.41□□□□□ -0.58
HDHD3-201ENST00000238379 A0A1B0GUS0 222 aa11.4□□□□□ -0.58
HDHD3-201ENST00000238379 FAM231BA6NCW3 169 aa11.4□□□□□ -0.58
HDHD3-201ENST00000238379 SPINK4O60575 86 aa11.4□□□□□ -0.58
HDHD3-201ENST00000238379 ZNF688P0C7X2 276 aa11.4□□□□□ -0.58
HDHD3-201ENST00000238379 RPL19P84098 196 aaKnown RBP11.4□□□□□ -0.58
HDHD3-201ENST00000238379 GZMBP10144 247 aa11.39□□□□□ -0.59
HDHD3-201ENST00000238379 SNRPD3P62318 126 aaKnown RBP11.39□□□□□ -0.59
HDHD3-201ENST00000238379 PAFAH1B2P68402 229 aa11.39□□□□□ -0.59
HDHD3-201ENST00000238379 HIST1H1AQ02539 215 aaPredicted RBP11.39□□□□□ -0.59
HDHD3-201ENST00000238379 DEFB114Q30KQ6 69 aa11.39□□□□□ -0.59
HDHD3-201ENST00000238379 TMEM61Q8N0U2 210 aa11.39□□□□□ -0.59
HDHD3-201ENST00000238379 FRZBQ92765 325 aa11.39□□□□□ -0.59
HDHD3-201ENST00000238379 WNK1Q9H4A3 2382 aa11.39□□□□□ -0.59
HDHD3-201ENST00000238379 LOC105371267A0A1B0GV96 52 aa11.39□□□□□ -0.59
HDHD3-201ENST00000238379 FABP5P3A8MUU1 101 aa11.39□□□□□ -0.59
HDHD3-201ENST00000238379 FOXA3P55318 350 aaPredicted RBP11.39□□□□□ -0.59
HDHD3-201ENST00000238379 PSMG4Q5JS54 123 aa11.39□□□□□ -0.59
HDHD3-201ENST00000238379 ACTL10Q5JWF8 245 aa11.39□□□□□ -0.59
HDHD3-201ENST00000238379 DYNLRB2Q8TF09 96 aa11.39□□□□□ -0.59
HDHD3-201ENST00000238379 FAM19A4Q96LR4 140 aa11.39□□□□□ -0.59
HDHD3-201ENST00000238379 JMJD1CQ15652 2540 aa11.38□□□□□ -0.59
HDHD3-201ENST00000238379 TRAV2A0A0B4J234 112 aa11.38□□□□□ -0.59
HDHD3-201ENST00000238379 NSUN5P1Q3KNT7 163 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms