RNA–Protein interactions for RNA: ENST00000221554.12

CCDC130-201, Transcript of coiled-coil domain containing 130, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC130, Length 1,792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-201ENST00000221554 CNFNQ9BYD5 112 aa16.26■□□□□ 0.19
CCDC130-201ENST00000221554 DOPEY1Q5JWR5 2465 aa16.26■□□□□ 0.19
CCDC130-201ENST00000221554 MAJINQ3KP22 176 aa16.26■□□□□ 0.19
CCDC130-201ENST00000221554 PRR31Q5SQ13 230 aa16.26■□□□□ 0.19
CCDC130-201ENST00000221554 MEGF9Q9H1U4 602 aa16.26■□□□□ 0.19
CCDC130-201ENST00000221554 U3KQE9 123 aa16.26■□□□□ 0.19
CCDC130-201ENST00000221554 TMSB15BA0A087X1C1 80 aa16.25■□□□□ 0.19
CCDC130-201ENST00000221554 IGHV1-69DA0A0B4J2H0 117 aa16.25■□□□□ 0.19
CCDC130-201ENST00000221554 CLPSL1A2RUU4 121 aa16.25■□□□□ 0.19
CCDC130-201ENST00000221554 BRI3O95415 125 aa16.25■□□□□ 0.19
CCDC130-201ENST00000221554 IGHV1-69P01742 117 aa16.25■□□□□ 0.19
CCDC130-201ENST00000221554 IGHV4-39P01824 125 aa16.25■□□□□ 0.19
CCDC130-201ENST00000221554 PPBPP02775 128 aa16.25■□□□□ 0.19
CCDC130-201ENST00000221554 ZNF138P52744 262 aa16.25■□□□□ 0.19
CCDC130-201ENST00000221554 HIST1H1AQ02539 215 aaPredicted RBP16.25■□□□□ 0.19
CCDC130-201ENST00000221554 LINC01559Q495D7 138 aa16.25■□□□□ 0.19
CCDC130-201ENST00000221554 LINC01545Q5VT33 79 aa16.25■□□□□ 0.19
CCDC130-201ENST00000221554 TRAV41A0A0B4J266 112 aa16.24■□□□□ 0.19
CCDC130-201ENST00000221554 D6R8Y8 96 aa16.24■□□□□ 0.19
CCDC130-201ENST00000221554 G3V318 75 aa16.24■□□□□ 0.19
CCDC130-201ENST00000221554 TWIST1Q15672 202 aa16.24■□□□□ 0.19
CCDC130-201ENST00000221554 ZNF747Q9BV97 191 aa16.24■□□□□ 0.19
CCDC130-201ENST00000221554 PPP1R14DQ9NXH3 145 aa16.24■□□□□ 0.19
CCDC130-201ENST00000221554 DOPEY2Q9Y3R5 2298 aa16.24■□□□□ 0.19
CCDC130-201ENST00000221554 TMEM213A2RRL7 107 aa16.23■□□□□ 0.19
CCDC130-201ENST00000221554 C19orf84I3L1E1 186 aa16.23■□□□□ 0.19
CCDC130-201ENST00000221554 DLEU1O43261 78 aa16.23■□□□□ 0.19
CCDC130-201ENST00000221554 ORM1P02763 201 aa16.23■□□□□ 0.19
CCDC130-201ENST00000221554 LINC00173Q6ZV60 143 aa16.23■□□□□ 0.19
CCDC130-201ENST00000221554 Q8TAT8 98 aa16.23■□□□□ 0.19
CCDC130-201ENST00000221554 IGHV3-35A0A0C4DH35 117 aa16.23■□□□□ 0.19
CCDC130-201ENST00000221554 ZNF80P51504 273 aaPredicted RBP16.23■□□□□ 0.19
CCDC130-201ENST00000221554 MRPL51Q4U2R6 128 aaKnown RBP16.23■□□□□ 0.19
CCDC130-201ENST00000221554 C19orf54Q5BKX5 351 aa16.23■□□□□ 0.19
CCDC130-201ENST00000221554 TMEM208Q9BTX3 173 aa16.23■□□□□ 0.19
CCDC130-201ENST00000221554 NPFFR1Q9GZQ6 430 aa16.23■□□□□ 0.19
CCDC130-201ENST00000221554 H3BUA1 57 aa16.22■□□□□ 0.19
CCDC130-201ENST00000221554 PLA2G2AP14555 144 aa16.22■□□□□ 0.19
CCDC130-201ENST00000221554 HLA-DMBP28068 263 aa16.22■□□□□ 0.19
CCDC130-201ENST00000221554 AMN1Q8IY45 258 aa16.22■□□□□ 0.19
CCDC130-201ENST00000221554 SIGLEC8Q9NYZ4 499 aa16.22■□□□□ 0.19
CCDC130-201ENST00000221554 G0S2P27469 103 aa16.21■□□□□ 0.19
CCDC130-201ENST00000221554 CKS2P33552 79 aa16.21■□□□□ 0.19
CCDC130-201ENST00000221554 TMEM78Q5T7P6 136 aa16.21■□□□□ 0.19
CCDC130-201ENST00000221554 USP9YO00507 2555 aaPredicted RBP16.21■□□□□ 0.19
CCDC130-201ENST00000221554 IFI27P40305 119 aaPredicted RBP16.21■□□□□ 0.18
CCDC130-201ENST00000221554 IGFL4Q6B9Z1 124 aa16.21■□□□□ 0.18
CCDC130-201ENST00000221554 SLC25A34Q6PIV7 304 aa16.21■□□□□ 0.18
CCDC130-201ENST00000221554 PMCHL2Q9BQD1 86 aa16.21■□□□□ 0.18
CCDC130-201ENST00000221554 LINC01548A6NM66 108 aa16.2■□□□□ 0.18
CCDC130-201ENST00000221554 DPF1Q92782 380 aa16.2■□□□□ 0.18
CCDC130-201ENST00000221554 LENEPQ9Y5L5 61 aa16.2■□□□□ 0.18
CCDC130-201ENST00000221554 IGHV3OR16-8A0A075B7F1 116 aa16.19■□□□□ 0.18
CCDC130-201ENST00000221554 IGF1P05019 195 aa16.19■□□□□ 0.18
CCDC130-201ENST00000221554 C9orf47Q6ZRZ4 202 aa16.19■□□□□ 0.18
CCDC130-201ENST00000221554 ERCC8Q13216 396 aa16.18■□□□□ 0.18
CCDC130-201ENST00000221554 STPG4Q8N801 248 aa16.18■□□□□ 0.18
CCDC130-201ENST00000221554 C10orf105Q8TEF2 133 aa16.18■□□□□ 0.18
CCDC130-201ENST00000221554 USMG5Q96IX5 58 aa16.18■□□□□ 0.18
CCDC130-201ENST00000221554 CCL19Q99731 98 aa16.18■□□□□ 0.18
CCDC130-201ENST00000221554 GOLT1BQ9Y3E0 138 aa16.18■□□□□ 0.18
CCDC130-201ENST00000221554 CRYBG3Q68DQ2 2970 aa16.18■□□□□ 0.18
CCDC130-201ENST00000221554 HBDP02042 147 aa16.18■□□□□ 0.18
CCDC130-201ENST00000221554 PRB4P10163 310 aaPredicted RBP16.18■□□□□ 0.18
CCDC130-201ENST00000221554 C8orf86Q6ZUL3 223 aa16.18■□□□□ 0.18
CCDC130-201ENST00000221554 PIFOQ8TCI5 191 aa16.18■□□□□ 0.18
CCDC130-201ENST00000221554 CENPEQ02224 2701 aa16.17■□□□□ 0.18
CCDC130-201ENST00000221554 PRAC2D3DTV9 90 aa16.17■□□□□ 0.18
CCDC130-201ENST00000221554 TCF21O43680 179 aa16.17■□□□□ 0.18
CCDC130-201ENST00000221554 TRGV3P03979 118 aa16.17■□□□□ 0.18
CCDC130-201ENST00000221554 CLEC2AQ6UVW9 174 aa16.17■□□□□ 0.18
CCDC130-201ENST00000221554 C9orf139Q6ZV77 190 aa16.17■□□□□ 0.18
CCDC130-201ENST00000221554 AGPAT4-IT1Q9H0P7 198 aa16.17■□□□□ 0.18
CCDC130-201ENST00000221554 MAP1LC3AQ9H492 121 aa16.17■□□□□ 0.18
CCDC130-201ENST00000221554 SCRT2Q9NQ03 307 aa16.17■□□□□ 0.18
CCDC130-201ENST00000221554 TRAV8-2A0A0B4J237 113 aa16.16■□□□□ 0.18
CCDC130-201ENST00000221554 NDUFA4O00483 81 aa16.16■□□□□ 0.18
CCDC130-201ENST00000221554 SRSF1Q07955 248 aaKnown RBP eCLIP16.16■□□□□ 0.188e-8■■■□□ 15.4
CCDC130-201ENST00000221554 ZNF124Q15973 351 aa16.16■□□□□ 0.18
CCDC130-201ENST00000221554 LGALS9BQ3B8N2 356 aa16.16■□□□□ 0.18
CCDC130-201ENST00000221554 LGALS9CQ6DKI2 356 aa16.16■□□□□ 0.18
CCDC130-201ENST00000221554 ORAOV1Q8WV07 137 aa16.16■□□□□ 0.18
CCDC130-201ENST00000221554 PTPN13Q12923 2485 aa16.16■□□□□ 0.18
CCDC130-201ENST00000221554 LOC389332A0A1B0GUA5 103 aa16.15■□□□□ 0.18
CCDC130-201ENST00000221554 hDV102S1A0JD36 115 aa16.15■□□□□ 0.18
CCDC130-201ENST00000221554 LINC01546A6NGU7 62 aa16.15■□□□□ 0.18
CCDC130-201ENST00000221554 ARL3P36405 182 aa16.15■□□□□ 0.18
CCDC130-201ENST00000221554 PSMG4Q5JS54 123 aa16.15■□□□□ 0.18
CCDC130-201ENST00000221554 SMIM15Q7Z3B0 74 aa16.15■□□□□ 0.18
CCDC130-201ENST00000221554 ZNF575Q86XF7 245 aa16.15■□□□□ 0.18
CCDC130-201ENST00000221554 TMEM219Q86XT9 240 aa16.15■□□□□ 0.18
CCDC130-201ENST00000221554 RNF182Q8N6D2 247 aa16.15■□□□□ 0.18
CCDC130-201ENST00000221554 PSMG3-AS1Q96PY0 264 aa16.15■□□□□ 0.18
CCDC130-201ENST00000221554 LRBAP50851 2863 aa16.15■□□□□ 0.18
CCDC130-201ENST00000221554 J3QKU1 62 aa16.15■□□□□ 0.18
CCDC130-201ENST00000221554 HINT1P49773 126 aaPredicted RBP16.15■□□□□ 0.18
CCDC130-201ENST00000221554 IL17RELQ6ZVW7 336 aa16.15■□□□□ 0.18
CCDC130-201ENST00000221554 NXT2Q9NPJ8 142 aaKnown RBP16.15■□□□□ 0.18
CCDC130-201ENST00000221554 HRNRQ86YZ3 2850 aaPredicted RBP16.15■□□□□ 0.18
CCDC130-201ENST00000221554 C12orf54Q6X4T0 127 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms