RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Trbv29A0A0G2LB96 114 aa10.31□□□□□ -0.76
Trim56-201ENSMUST00000054384 Gm21913J3KML9 361 aa10.31□□□□□ -0.76
Trim56-201ENSMUST00000054384 Gm21776J3QPJ5 361 aa10.31□□□□□ -0.76
Trim56-201ENSMUST00000054384 Csn3P06796 181 aa10.31□□□□□ -0.76
Trim56-201ENSMUST00000054384 TskuQ8CBR6 354 aa10.31□□□□□ -0.76
Trim56-201ENSMUST00000054384 Scgb1b19F6WYW0 93 aa10.31□□□□□ -0.76
Trim56-201ENSMUST00000054384 Scgb1b2O35176 93 aa10.31□□□□□ -0.76
Trim56-201ENSMUST00000054384 Alox12bO70582 701 aa10.31□□□□□ -0.76
Trim56-201ENSMUST00000054384 Tsc2Q61037 1814 aa10.31□□□□□ -0.76
Trim56-201ENSMUST00000054384 Myoz1Q9JK37 296 aa10.31□□□□□ -0.76
Trim56-201ENSMUST00000054384 Il17bQ9QXT6 180 aa10.31□□□□□ -0.76
Trim56-201ENSMUST00000054384 Gm6525A0A0A6YW33 106 aa10.3□□□□□ -0.76
Trim56-201ENSMUST00000054384 Klhdc1Q80YG3 406 aa10.3□□□□□ -0.76
Trim56-201ENSMUST00000054384 UmodQ91X17 642 aa10.3□□□□□ -0.76
Trim56-201ENSMUST00000054384 Uqcrfs1Q9CR68 274 aa10.3□□□□□ -0.76
Trim56-201ENSMUST00000054384 SdhcQ9CZB0 169 aaKnown RBP10.3□□□□□ -0.76
Trim56-201ENSMUST00000054384 RlfA2A7F4 1918 aa10.3□□□□□ -0.76
Trim56-201ENSMUST00000054384 H2-M5A7VMS3 348 aa10.3□□□□□ -0.76
Trim56-201ENSMUST00000054384 Olfr747E9PXH6 313 aa10.3□□□□□ -0.76
Trim56-201ENSMUST00000054384 Tmem178bM0QWJ9 172 aa10.3□□□□□ -0.76
Trim56-201ENSMUST00000054384 Rasl10bQ5SSG5 203 aa10.3□□□□□ -0.76
Trim56-201ENSMUST00000054384 Cphx2Q8BX39 182 aa10.3□□□□□ -0.76
Trim56-201ENSMUST00000054384 Phlda3Q9WV95 125 aa10.3□□□□□ -0.76
Trim56-201ENSMUST00000054384 Pom121l12A0A1B0GSJ4 278 aa10.3□□□□□ -0.76
Trim56-201ENSMUST00000054384 Psg26Q4KL65 475 aa10.3□□□□□ -0.76
Trim56-201ENSMUST00000054384 Atxn7l1Q9CZ05 146 aa10.3□□□□□ -0.76
Trim56-201ENSMUST00000054384 Pcnx1Q9QYC1 2344 aa10.3□□□□□ -0.76
Trim56-201ENSMUST00000054384 Gm21775J3KMK6 180 aa10.3□□□□□ -0.76
Trim56-201ENSMUST00000054384 Oxgr1Q6IYF8 337 aa10.3□□□□□ -0.76
Trim56-201ENSMUST00000054384 MrgprgQ91ZB5 289 aa10.3□□□□□ -0.76
Trim56-201ENSMUST00000054384 Marveld3Q9D956 376 aa10.3□□□□□ -0.76
Trim56-201ENSMUST00000054384 PyyQ9EPS2 98 aa10.3□□□□□ -0.76
Trim56-201ENSMUST00000054384 C1qtnf4Q8R066 326 aa10.3□□□□□ -0.76
Trim56-201ENSMUST00000054384 4930544G11RikQ9CR99 193 aa10.3□□□□□ -0.76
Trim56-201ENSMUST00000054384 Igsf11P0C673 428 aa10.3□□□□□ -0.76
Trim56-201ENSMUST00000054384 PpoxP51175 477 aa10.3□□□□□ -0.76
Trim56-201ENSMUST00000054384 Q3TEI4 1023 aa10.3□□□□□ -0.76
Trim56-201ENSMUST00000054384 Olfr322Q5NCC8 327 aa10.3□□□□□ -0.76
Trim56-201ENSMUST00000054384 Pla2g3Q8BZT7 504 aa10.3□□□□□ -0.76
Trim56-201ENSMUST00000054384 Ifitm2Q99J93 144 aa10.3□□□□□ -0.76
Trim56-201ENSMUST00000054384 Dcbld1Q9D4J3 503 aa10.3□□□□□ -0.76
Trim56-201ENSMUST00000054384 Pappa2E9PZ87 1789 aa10.3□□□□□ -0.76
Trim56-201ENSMUST00000054384 Tac3P55099 116 aa10.29□□□□□ -0.76
Trim56-201ENSMUST00000054384 Tcl1b1P56840 116 aa10.29□□□□□ -0.76
Trim56-201ENSMUST00000054384 Defb46Q4QY34 57 aa10.29□□□□□ -0.76
Trim56-201ENSMUST00000054384 Nrxn2E9Q7X7 1710 aa10.29□□□□□ -0.76
Trim56-201ENSMUST00000054384 Olfr1029A2ATE0 324 aa10.29□□□□□ -0.76
Trim56-201ENSMUST00000054384 Atp6v0cP63082 155 aa10.29□□□□□ -0.76
Trim56-201ENSMUST00000054384 Tbr1Q64336 681 aa10.29□□□□□ -0.76
Trim56-201ENSMUST00000054384 Olfr1028Q7TR89 324 aa10.29□□□□□ -0.76
Trim56-201ENSMUST00000054384 Nrn1lQ8C4W3 162 aa10.29□□□□□ -0.76
Trim56-201ENSMUST00000054384 Dctn5Q9QZB9 182 aa10.29□□□□□ -0.76
Trim56-201ENSMUST00000054384 KcpQ3U492 1550 aa10.29□□□□□ -0.76
Trim56-201ENSMUST00000054384 D930048N14RikA2AA67 225 aa10.29□□□□□ -0.76
Trim56-201ENSMUST00000054384 Gm10073E9Q3T0 114 aa10.29□□□□□ -0.76
Trim56-201ENSMUST00000054384 Rps11P62281 158 aaKnown RBP10.29□□□□□ -0.76
Trim56-201ENSMUST00000054384 PgpQ8CHP8 321 aa10.29□□□□□ -0.76
Trim56-201ENSMUST00000054384 Efnb1P52795 345 aa10.29□□□□□ -0.76
Trim56-201ENSMUST00000054384 Prss58Q8BW11 241 aa10.29□□□□□ -0.76
Trim56-201ENSMUST00000054384 Eva1aQ91WM6 156 aa10.29□□□□□ -0.76
Trim56-201ENSMUST00000054384 Chchd1Q9CQA6 118 aa10.29□□□□□ -0.76
Trim56-201ENSMUST00000054384 C1ql1O88992 258 aa10.29□□□□□ -0.76
Trim56-201ENSMUST00000054384 F11rO88792 300 aa10.29□□□□□ -0.76
Trim56-201ENSMUST00000054384 Ssty1P13675 232 aa10.29□□□□□ -0.76
Trim56-201ENSMUST00000054384 Olfr91Q7TRL3 312 aa10.29□□□□□ -0.76
Trim56-201ENSMUST00000054384 Arl6ip6Q8BH07 226 aa10.29□□□□□ -0.76
Trim56-201ENSMUST00000054384 Bpifa5Q9CQX3 270 aa10.29□□□□□ -0.76
Trim56-201ENSMUST00000054384 Asxl3Q8C4A5 2259 aa10.29□□□□□ -0.76
Trim56-201ENSMUST00000054384 Gm21394Q497R7 227 aa10.29□□□□□ -0.76
Trim56-201ENSMUST00000054384 Olfr150Q60895 312 aa10.29□□□□□ -0.76
Trim56-201ENSMUST00000054384 MiaQ61865 130 aa10.29□□□□□ -0.76
Trim56-201ENSMUST00000054384 Thsd7aQ69ZU6 1645 aa10.29□□□□□ -0.76
Trim56-201ENSMUST00000054384 Dcaf10A2AKB9 566 aa10.29□□□□□ -0.76
Trim56-201ENSMUST00000054384 Gm16442D3YZG3 307 aa10.29□□□□□ -0.76
Trim56-201ENSMUST00000054384 Gm20403G3UYB0 123 aa10.29□□□□□ -0.76
Trim56-201ENSMUST00000054384 Eml2Q7TNG5 649 aa10.29□□□□□ -0.76
Trim56-201ENSMUST00000054384 Lhfpl6Q8BM86 200 aa10.29□□□□□ -0.76
Trim56-201ENSMUST00000054384 Mpig6bD7PDD4 242 aa10.28□□□□□ -0.76
Trim56-201ENSMUST00000054384 Cdx1P18111 268 aa10.28□□□□□ -0.76
Trim56-201ENSMUST00000054384 P18530 117 aa10.28□□□□□ -0.76
Trim56-201ENSMUST00000054384 Nkg7Q99PA5 165 aa10.28□□□□□ -0.76
Trim56-201ENSMUST00000054384 Hcfc1r1Q9CYQ5 120 aa10.28□□□□□ -0.76
Trim56-201ENSMUST00000054384 Tspan32Q9JHH2 256 aa10.28□□□□□ -0.76
Trim56-201ENSMUST00000054384 EsdQ9R0P3 282 aa10.28□□□□□ -0.76
Trim56-201ENSMUST00000054384 Gm14443A2ARX0 610 aa10.28□□□□□ -0.76
Trim56-201ENSMUST00000054384 Trav13d-3J3QMG8 112 aa10.28□□□□□ -0.76
Trim56-201ENSMUST00000054384 Gm21900J3QP38 180 aa10.28□□□□□ -0.76
Trim56-201ENSMUST00000054384 A630076J17RikJ3QQ32 107 aa10.28□□□□□ -0.76
Trim56-201ENSMUST00000054384 Dtx1Q61010 627 aa10.28□□□□□ -0.76
Trim56-201ENSMUST00000054384 March11Q8CBH7 400 aa10.28□□□□□ -0.76
Trim56-201ENSMUST00000054384 Fam117aQ7TNF9 451 aa10.28□□□□□ -0.76
Trim56-201ENSMUST00000054384 Klf12O35738 402 aa10.28□□□□□ -0.76
Trim56-201ENSMUST00000054384 SftpcP21841 193 aa10.28□□□□□ -0.76
Trim56-201ENSMUST00000054384 Hide1Q75VT8 222 aa10.28□□□□□ -0.76
Trim56-201ENSMUST00000054384 B020031M17RikQ3UT11 173 aa10.28□□□□□ -0.76
Trim56-201ENSMUST00000054384 Nabp2Q8R2Y9 212 aa10.28□□□□□ -0.76
Trim56-201ENSMUST00000054384 Cdk2ap2Q9CPY4 127 aa10.28□□□□□ -0.76
Trim56-201ENSMUST00000054384 Malrd1A2AJX4 2123 aa10.28□□□□□ -0.76
Trim56-201ENSMUST00000054384 P18524 117 aa10.28□□□□□ -0.76
Trim56-201ENSMUST00000054384 GfralQ6SJE0 393 aa10.28□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 192 ms