RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 SMAD5-AS1Q9Y6J3 95 aa7.45□□□□□ -1.22
PHGDH-215ENST00000641371 URGCP-MRPS24S4R325 110 aa7.45□□□□□ -1.22
PHGDH-215ENST00000641371 TLN2Q9Y4G6 2542 aa7.44□□□□□ -1.22
PHGDH-215ENST00000641371 XKRY2A2RUG3 117 aa7.44□□□□□ -1.22
PHGDH-215ENST00000641371 PGPEP1LA6NFU8 196 aa7.44□□□□□ -1.22
PHGDH-215ENST00000641371 ZNF705GA8MUZ8 300 aaPredicted RBP7.44□□□□□ -1.22
PHGDH-215ENST00000641371 A8MWL6 223 aa7.44□□□□□ -1.22
PHGDH-215ENST00000641371 SLC17A3O00476 420 aa7.44□□□□□ -1.22
PHGDH-215ENST00000641371 CHEK1O14757 476 aa7.44□□□□□ -1.22
PHGDH-215ENST00000641371 TRBV12-3P01733 135 aa7.44□□□□□ -1.22
PHGDH-215ENST00000641371 ID1P41134 155 aa7.44□□□□□ -1.22
PHGDH-215ENST00000641371 LCN12Q6JVE5 192 aa7.44□□□□□ -1.22
PHGDH-215ENST00000641371 WDR73Q6P4I2 378 aa7.44□□□□□ -1.22
PHGDH-215ENST00000641371 C8orf86Q6ZUL3 223 aa7.44□□□□□ -1.22
PHGDH-215ENST00000641371 GBGT1Q8N5D6 347 aa7.44□□□□□ -1.22
PHGDH-215ENST00000641371 DPF1Q92782 380 aa7.44□□□□□ -1.22
PHGDH-215ENST00000641371 C16orf92Q96LL3 132 aa7.44□□□□□ -1.22
PHGDH-215ENST00000641371 C17orf77Q96MU5 243 aa7.44□□□□□ -1.22
PHGDH-215ENST00000641371 GFRA4Q9GZZ7 299 aa7.44□□□□□ -1.22
PHGDH-215ENST00000641371 NRN1Q9NPD7 142 aa7.44□□□□□ -1.22
PHGDH-215ENST00000641371 V9GYV3 84 aa7.44□□□□□ -1.22
PHGDH-215ENST00000641371 HIVEP2P31629 2446 aa7.43□□□□□ -1.22
PHGDH-215ENST00000641371 AKAP9Q99996 3911 aa7.43□□□□□ -1.22
PHGDH-215ENST00000641371 TRAV34A0A0B4J273 112 aa7.43□□□□□ -1.22
PHGDH-215ENST00000641371 TRBV7-9A0A0J9YWB2 115 aa7.43□□□□□ -1.22
PHGDH-215ENST00000641371 A0A1B0GUS0 222 aa7.43□□□□□ -1.22
PHGDH-215ENST00000641371 A0A1W2PPQ1 181 aa7.43□□□□□ -1.22
PHGDH-215ENST00000641371 LINC01619G3V211 115 aa7.43□□□□□ -1.22
PHGDH-215ENST00000641371 H3BTX0 84 aa7.43□□□□□ -1.22
PHGDH-215ENST00000641371 OVOL1O14753 267 aa7.43□□□□□ -1.22
PHGDH-215ENST00000641371 P01737 135 aa7.43□□□□□ -1.22
PHGDH-215ENST00000641371 MT-ND6P03923 174 aa7.43□□□□□ -1.22
PHGDH-215ENST00000641371 S100A6P06703 90 aa7.43□□□□□ -1.22
PHGDH-215ENST00000641371 RPS20P60866 119 aaKnown RBP7.43□□□□□ -1.22
PHGDH-215ENST00000641371 Q6AWC8 147 aa7.43□□□□□ -1.22
PHGDH-215ENST00000641371 UNQ9165/PRO28630Q6UXU0 137 aa7.43□□□□□ -1.22
PHGDH-215ENST00000641371 PRNTQ86SH4 94 aa7.43□□□□□ -1.22
PHGDH-215ENST00000641371 LINC00479Q96M42 142 aa7.43□□□□□ -1.22
PHGDH-215ENST00000641371 RHPN1-AS1Q9BWJ2 59 aa7.43□□□□□ -1.22
PHGDH-215ENST00000641371 TGIF2-C20orf24A0A0A6YYL0 155 aa7.42□□□□□ -1.22
PHGDH-215ENST00000641371 TRAV2A0A0B4J234 112 aa7.42□□□□□ -1.22
PHGDH-215ENST00000641371 SMIM27A0A1W2PRY6 76 aa7.42□□□□□ -1.22
PHGDH-215ENST00000641371 C19orf71A6NCJ1 209 aa7.42□□□□□ -1.22
PHGDH-215ENST00000641371 NPIPB6E9PJ23 425 aa7.42□□□□□ -1.22
PHGDH-215ENST00000641371 LY6G6DO95868 133 aa7.42□□□□□ -1.22
PHGDH-215ENST00000641371 IGLV2-11P01706 119 aa7.42□□□□□ -1.22
PHGDH-215ENST00000641371 SNRPCP09234 159 aaKnown RBP7.42□□□□□ -1.22
PHGDH-215ENST00000641371 CXCL1P09341 107 aa7.42□□□□□ -1.22
PHGDH-215ENST00000641371 PAFAH1B2P68402 229 aa7.42□□□□□ -1.22
PHGDH-215ENST00000641371 SRSF2Q01130 221 aaKnown RBP7.42□□□□□ -1.22
PHGDH-215ENST00000641371 OR5I1Q13606 314 aa7.42□□□□□ -1.22
PHGDH-215ENST00000641371 TMEM78Q5T7P6 136 aa7.42□□□□□ -1.22
PHGDH-215ENST00000641371 ATP5L2Q7Z4Y8 100 aa7.42□□□□□ -1.22
PHGDH-215ENST00000641371 TSKUQ8WUA8 353 aa7.42□□□□□ -1.22
PHGDH-215ENST00000641371 LINC00477Q96M19 166 aa7.42□□□□□ -1.22
PHGDH-215ENST00000641371 RPP21Q9H633 154 aaKnown RBP7.42□□□□□ -1.22
PHGDH-215ENST00000641371 ESM1Q9NQ30 184 aa7.42□□□□□ -1.22
PHGDH-215ENST00000641371 AURKAIP1Q9NWT8 199 aaPredicted RBP7.42□□□□□ -1.22
PHGDH-215ENST00000641371 NAT8BQ9UHF3 227 aa7.42□□□□□ -1.22
PHGDH-215ENST00000641371 IGHV3OR16-8A0A075B7F1 116 aa7.41□□□□□ -1.22
PHGDH-215ENST00000641371 IZUMO1RA6ND01 250 aa7.41□□□□□ -1.22
PHGDH-215ENST00000641371 M0R3E3 92 aa7.41□□□□□ -1.22
PHGDH-215ENST00000641371 ZNF207O43670 478 aaKnown RBP7.41□□□□□ -1.22
PHGDH-215ENST00000641371 TCF21O43680 179 aa7.41□□□□□ -1.22
PHGDH-215ENST00000641371 APOHP02749 345 aaPredicted RBP7.41□□□□□ -1.22
PHGDH-215ENST00000641371 HOXD3P31249 432 aaPredicted RBP7.41□□□□□ -1.22
PHGDH-215ENST00000641371 KLF5Q13887 457 aaPredicted RBP7.41□□□□□ -1.22
PHGDH-215ENST00000641371 SMUG1Q53HV7 270 aa7.41□□□□□ -1.22
PHGDH-215ENST00000641371 C9orf47Q6ZRZ4 202 aa7.41□□□□□ -1.22
PHGDH-215ENST00000641371 LCNL1Q6ZST4 164 aa7.41□□□□□ -1.22
PHGDH-215ENST00000641371 TCF24Q7RTU0 167 aa7.41□□□□□ -1.22
PHGDH-215ENST00000641371 NUDT10Q8NFP7 164 aa7.41□□□□□ -1.22
PHGDH-215ENST00000641371 WIPF2Q8TF74 440 aaPredicted RBP7.41□□□□□ -1.22
PHGDH-215ENST00000641371 NUDT11Q96G61 164 aa7.41□□□□□ -1.22
PHGDH-215ENST00000641371 DUX5Q96PT3 197 aa7.41□□□□□ -1.22
PHGDH-215ENST00000641371 RNASE7Q9H1E1 156 aaKnown RBP7.41□□□□□ -1.22
PHGDH-215ENST00000641371 TSSC4Q9Y5U2 329 aaPredicted RBP7.41□□□□□ -1.22
PHGDH-215ENST00000641371 CELSR1Q9NYQ6 3014 aa7.41□□□□□ -1.22
PHGDH-215ENST00000641371 SVEP1Q4LDE5 3571 aa7.4□□□□□ -1.22
PHGDH-215ENST00000641371 SONP18583 2426 aaKnown RBP7.4□□□□□ -1.22
PHGDH-215ENST00000641371 MXRA5Q9NR99 2828 aa7.4□□□□□ -1.22
PHGDH-215ENST00000641371 IGHV4OR15-8A0A075B7B6 117 aa7.4□□□□□ -1.22
PHGDH-215ENST00000641371 A0A087WW49 117 aa7.4□□□□□ -1.22
PHGDH-215ENST00000641371 IGHV3-66A0A0C4DH42 116 aa7.4□□□□□ -1.22
PHGDH-215ENST00000641371 A0A1B0GW15 77 aa7.4□□□□□ -1.22
PHGDH-215ENST00000641371 TMEM213A2RRL7 107 aa7.4□□□□□ -1.22
PHGDH-215ENST00000641371 S100A8P05109 93 aa7.4□□□□□ -1.22
PHGDH-215ENST00000641371 ZNF138P52744 262 aa7.4□□□□□ -1.22
PHGDH-215ENST00000641371 SNRPD3P62318 126 aaKnown RBP7.4□□□□□ -1.22
PHGDH-215ENST00000641371 RPL11P62913 178 aaKnown RBP7.4□□□□□ -1.22
PHGDH-215ENST00000641371 TM4SF20Q53R12 229 aa7.4□□□□□ -1.22
PHGDH-215ENST00000641371 FAM162BQ5T6X4 162 aa7.4□□□□□ -1.22
PHGDH-215ENST00000641371 PRR27Q6MZM9 219 aa7.4□□□□□ -1.22
PHGDH-215ENST00000641371 OR1N2Q8NGR9 330 aa7.4□□□□□ -1.22
PHGDH-215ENST00000641371 OR10J6PQ8NGY7 276 aa7.4□□□□□ -1.22
PHGDH-215ENST00000641371 PRR25Q96S07 402 aa7.4□□□□□ -1.22
PHGDH-215ENST00000641371 ASCL2Q99929 193 aa7.4□□□□□ -1.22
PHGDH-215ENST00000641371 GNB1LQ9BYB4 327 aa7.4□□□□□ -1.22
PHGDH-215ENST00000641371 ANK3Q12955 4377 aaKnown RBP7.4□□□□□ -1.22
PHGDH-215ENST00000641371 IGKV2-40A0A087WW87 121 aaPredicted RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms