RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 SPRY2O43597 315 aa10.9□□□□□ -0.66
SCARB2-227ENST00000640957 GP9P14770 177 aa10.9□□□□□ -0.66
SCARB2-227ENST00000640957 CHAC1Q9BUX1 264 aa10.9□□□□□ -0.66
SCARB2-227ENST00000640957 CGB3P0DN86 165 aa10.9□□□□□ -0.67
SCARB2-227ENST00000640957 CGB7P0DN87 165 aa10.9□□□□□ -0.67
SCARB2-227ENST00000640957 GATA3P23771 443 aa10.9□□□□□ -0.67
SCARB2-227ENST00000640957 FOXC2Q99958 501 aa10.9□□□□□ -0.67
SCARB2-227ENST00000640957 VGLL1Q99990 258 aa10.9□□□□□ -0.67
SCARB2-227ENST00000640957 CACNA1AO00555 2505 aa10.89□□□□□ -0.67
SCARB2-227ENST00000640957 NPIPB5A8MRT5 1133 aa10.89□□□□□ -0.67
SCARB2-227ENST00000640957 IGLV2-11P01706 119 aa10.89□□□□□ -0.67
SCARB2-227ENST00000640957 IGHV3-23P01764 117 aa10.89□□□□□ -0.67
SCARB2-227ENST00000640957 PLA2G2CQ5R387 149 aa10.89□□□□□ -0.67
SCARB2-227ENST00000640957 CACNG8Q8WXS5 425 aa10.89□□□□□ -0.67
SCARB2-227ENST00000640957 KLF12Q9Y4X4 402 aa10.89□□□□□ -0.67
SCARB2-227ENST00000640957 APOBEC3AP31941 199 aaPredicted RBP10.89□□□□□ -0.67
SCARB2-227ENST00000640957 MZT1Q08AG7 82 aa10.89□□□□□ -0.67
SCARB2-227ENST00000640957 MRPL51Q4U2R6 128 aaKnown RBP10.89□□□□□ -0.67
SCARB2-227ENST00000640957 PTH2Q96A98 100 aa10.89□□□□□ -0.67
SCARB2-227ENST00000640957 IGKV2-40A0A087WW87 121 aaPredicted RBP10.89□□□□□ -0.67
SCARB2-227ENST00000640957 IGKV2D-40P01614 121 aaPredicted RBP10.89□□□□□ -0.67
SCARB2-227ENST00000640957 CR1LQ2VPA4 569 aa10.89□□□□□ -0.67
SCARB2-227ENST00000640957 ZC2HC1BQ5TFG8 222 aa10.89□□□□□ -0.67
SCARB2-227ENST00000640957 C22orf34Q6ZV56 151 aa10.89□□□□□ -0.67
SCARB2-227ENST00000640957 OR5A1Q8NGJ0 315 aa10.89□□□□□ -0.67
SCARB2-227ENST00000640957 GLMPQ8WWB7 406 aa10.89□□□□□ -0.67
SCARB2-227ENST00000640957 A0A1B0GV72 72 aa10.88□□□□□ -0.67
SCARB2-227ENST00000640957 A0A1B0GWB2 263 aa10.88□□□□□ -0.67
SCARB2-227ENST00000640957 LINC01548A6NM66 108 aa10.88□□□□□ -0.67
SCARB2-227ENST00000640957 BMI1P35226 326 aa10.88□□□□□ -0.67
SCARB2-227ENST00000640957 LEPP41159 167 aa10.88□□□□□ -0.67
SCARB2-227ENST00000640957 CD300EQ496F6 205 aaPredicted RBP10.88□□□□□ -0.67
SCARB2-227ENST00000640957 MAPKAPK5-AS1Q8N8E1 139 aa10.88□□□□□ -0.67
SCARB2-227ENST00000640957 PSG8Q9UQ74 426 aa10.88□□□□□ -0.67
SCARB2-227ENST00000640957 HIGD1AQ9Y241 93 aa10.88□□□□□ -0.67
SCARB2-227ENST00000640957 PRRG2O14669 202 aa10.88□□□□□ -0.67
SCARB2-227ENST00000640957 HBDP02042 147 aa10.88□□□□□ -0.67
SCARB2-227ENST00000640957 ZNF474Q6S9Z5 364 aaPredicted RBP10.88□□□□□ -0.67
SCARB2-227ENST00000640957 SLC25A48Q6ZT89 311 aaKnown RBP10.88□□□□□ -0.67
SCARB2-227ENST00000640957 STXBP6Q8NFX7 210 aa10.88□□□□□ -0.67
SCARB2-227ENST00000640957 RNF7Q9UBF6 113 aa10.88□□□□□ -0.67
SCARB2-227ENST00000640957 TRAV40A0A0B4J280 105 aa10.87□□□□□ -0.67
SCARB2-227ENST00000640957 NDUFA3O95167 84 aa10.87□□□□□ -0.67
SCARB2-227ENST00000640957 SUB1P53999 127 aaKnown RBP eCLIP10.87□□□□□ -0.67
SCARB2-227ENST00000640957 C3orf36Q3SXR2 165 aa10.87□□□□□ -0.67
SCARB2-227ENST00000640957 ZNF418Q8TF45 676 aaPredicted RBP10.87□□□□□ -0.67
SCARB2-227ENST00000640957 GAFA1Q96PS6 74 aa10.87□□□□□ -0.67
SCARB2-227ENST00000640957 TRBV25-1A0A075B6N4 114 aa10.87□□□□□ -0.67
SCARB2-227ENST00000640957 HLA-DMBP28068 263 aa10.87□□□□□ -0.67
SCARB2-227ENST00000640957 ZNF479Q96JC4 524 aa10.87□□□□□ -0.67
SCARB2-227ENST00000640957 SLC25A39Q9BZJ4 359 aaPredicted RBP10.87□□□□□ -0.67
SCARB2-227ENST00000640957 DYNLRB1Q9NP97 96 aa10.87□□□□□ -0.67
SCARB2-227ENST00000640957 ORMDL3Q8N138 153 aa10.87□□□□□ -0.67
SCARB2-227ENST00000640957 OVOL3O00110 214 aa10.86□□□□□ -0.67
SCARB2-227ENST00000640957 SPANXB1Q9NS25 103 aaPredicted RBP10.86□□□□□ -0.67
SCARB2-227ENST00000640957 TRAV26-2A0A0B4J265 109 aa10.86□□□□□ -0.67
SCARB2-227ENST00000640957 SCGB2A2Q13296 93 aa10.86□□□□□ -0.67
SCARB2-227ENST00000640957 CT45A10P0DMU9 189 aa10.85□□□□□ -0.67
SCARB2-227ENST00000640957 OR4X2Q8NGF9 303 aa10.85□□□□□ -0.67
SCARB2-227ENST00000640957 OR9G4Q8NGQ1 327 aa10.85□□□□□ -0.67
SCARB2-227ENST00000640957 IGHV3OR16-13A0A075B7E8 117 aa10.85□□□□□ -0.67
SCARB2-227ENST00000640957 IGHV3-74A0A0B4J1X5 117 aa10.85□□□□□ -0.67
SCARB2-227ENST00000640957 TMEM189A5PLL7 270 aa10.85□□□□□ -0.67
SCARB2-227ENST00000640957 PLGLAQ15195 96 aa10.85□□□□□ -0.67
SCARB2-227ENST00000640957 HIST1H4GQ99525 98 aa10.85□□□□□ -0.67
SCARB2-227ENST00000640957 FBXL15Q9H469 300 aa10.85□□□□□ -0.67
SCARB2-227ENST00000640957 DKK4Q9UBT3 224 aa10.85□□□□□ -0.67
SCARB2-227ENST00000640957 SLC25A15Q9Y619 301 aa10.85□□□□□ -0.67
SCARB2-227ENST00000640957 TMEM8BA6NDV4 472 aa10.85□□□□□ -0.67
SCARB2-227ENST00000640957 ORM1P02763 201 aa10.85□□□□□ -0.67
SCARB2-227ENST00000640957 LYPD2Q6UXB3 125 aa10.85□□□□□ -0.67
SCARB2-227ENST00000640957 OR4C13Q8NGP0 309 aa10.85□□□□□ -0.67
SCARB2-227ENST00000640957 COL25A1Q9BXS0 654 aaPredicted RBP10.85□□□□□ -0.67
SCARB2-227ENST00000640957 GEMIN7Q9H840 131 aaKnown RBP10.85□□□□□ -0.67
SCARB2-227ENST00000640957 PLSCR4Q9NRQ2 329 aa10.85□□□□□ -0.67
SCARB2-227ENST00000640957 ZNF492Q9P255 531 aa10.85□□□□□ -0.67
SCARB2-227ENST00000640957 POU2AF1Q16633 256 aa10.84□□□□□ -0.67
SCARB2-227ENST00000640957 LGALS9BQ3B8N2 356 aa10.84□□□□□ -0.67
SCARB2-227ENST00000640957 LGALS9CQ6DKI2 356 aa10.84□□□□□ -0.67
SCARB2-227ENST00000640957 CTSZQ9UBR2 303 aa10.84□□□□□ -0.67
SCARB2-227ENST00000640957 FOXC1Q12948 553 aa10.84□□□□□ -0.67
SCARB2-227ENST00000640957 CYSLTR1Q9Y271 337 aa10.84□□□□□ -0.67
SCARB2-227ENST00000640957 SOX21Q9Y651 276 aaPredicted RBP10.84□□□□□ -0.67
SCARB2-227ENST00000640957 CREBBPQ92793 2442 aa10.84□□□□□ -0.67
SCARB2-227ENST00000640957 LOC107984156A0A0G2JMH3 177 aa10.83□□□□□ -0.67
SCARB2-227ENST00000640957 WI2-2373I1.2A0A1W2PRP0 233 aa10.83□□□□□ -0.67
SCARB2-227ENST00000640957 IGLL5B9A064 214 aa10.83□□□□□ -0.67
SCARB2-227ENST00000640957 J3KRW8 73 aa10.83□□□□□ -0.67
SCARB2-227ENST00000640957 IL4P05112 153 aa10.83□□□□□ -0.67
SCARB2-227ENST00000640957 FAM104BQ5XKR9 115 aa10.83□□□□□ -0.67
SCARB2-227ENST00000640957 ARL17AQ8IVW1 177 aa10.83□□□□□ -0.67
SCARB2-227ENST00000640957 C8orf46Q8TAG6 207 aa10.83□□□□□ -0.67
SCARB2-227ENST00000640957 OSR1Q8TAX0 266 aaPredicted RBP10.83□□□□□ -0.67
SCARB2-227ENST00000640957 TMEM200BQ69YZ2 307 aa10.83□□□□□ -0.68
SCARB2-227ENST00000640957 ZNF562Q6V9R5 426 aa10.83□□□□□ -0.68
SCARB2-227ENST00000640957 SYT8Q8NBV8 401 aa10.83□□□□□ -0.68
SCARB2-227ENST00000640957 RASL11BQ9BPW5 248 aa10.83□□□□□ -0.68
SCARB2-227ENST00000640957 SS18L2Q9UHA2 77 aa10.83□□□□□ -0.68
SCARB2-227ENST00000640957 RAI1Q7Z5J4 1906 aaPredicted RBP10.83□□□□□ -0.68
SCARB2-227ENST00000640957 LYNX1G3V0Z9 82 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 137.3 ms