RNA–Protein interactions for RNA: ENST00000629667.2

PDLIM3-213, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-213ENST00000629667 ZNF431Q8TF32 576 aaPredicted RBP10.68□□□□□ -0.7
PDLIM3-213ENST00000629667 C18orf15Q96N68 181 aa10.68□□□□□ -0.7
PDLIM3-213ENST00000629667 GSN-AS1Q9NRJ2 163 aa10.68□□□□□ -0.7
PDLIM3-213ENST00000629667 CCDC59Q9P031 241 aaKnown RBP10.68□□□□□ -0.7
PDLIM3-213ENST00000629667 MGAT4CQ9UBM8 478 aa10.68□□□□□ -0.7
PDLIM3-213ENST00000629667 FUT9Q9Y231 359 aa10.68□□□□□ -0.7
PDLIM3-213ENST00000629667 PXMP4Q9Y6I8 212 aa10.68□□□□□ -0.7
PDLIM3-213ENST00000629667 ICOSQ9Y6W8 199 aa10.68□□□□□ -0.7
PDLIM3-213ENST00000629667 A0A087WTM6 91 aa10.67□□□□□ -0.7
PDLIM3-213ENST00000629667 TRGV1A0A0A0MS02 117 aa10.67□□□□□ -0.7
PDLIM3-213ENST00000629667 LINC00854A0A1B0GVQ3 168 aa10.67□□□□□ -0.7
PDLIM3-213ENST00000629667 FNDC10F2Z333 226 aa10.67□□□□□ -0.7
PDLIM3-213ENST00000629667 CCNKO75909 580 aa10.67□□□□□ -0.7
PDLIM3-213ENST00000629667 METTL15P1P0C7V9 234 aa10.67□□□□□ -0.7
PDLIM3-213ENST00000629667 DNAH10OSP0CZ25 163 aa10.67□□□□□ -0.7
PDLIM3-213ENST00000629667 CT45A10P0DMU9 189 aa10.67□□□□□ -0.7
PDLIM3-213ENST00000629667 ZNF546Q86UE3 836 aa10.67□□□□□ -0.7
PDLIM3-213ENST00000629667 TOMM5Q8N4H5 51 aa10.67□□□□□ -0.7
PDLIM3-213ENST00000629667 ZNF680Q8NEM1 530 aa10.67□□□□□ -0.7
PDLIM3-213ENST00000629667 OR10P1Q8NGE3 313 aa10.67□□□□□ -0.7
PDLIM3-213ENST00000629667 MCFD2Q8NI22 146 aa10.67□□□□□ -0.7
PDLIM3-213ENST00000629667 DYNC2LI1Q8TCX1 351 aa10.67□□□□□ -0.7
PDLIM3-213ENST00000629667 SMIM8Q96KF7 97 aa10.67□□□□□ -0.7
PDLIM3-213ENST00000629667 ODF3Q96PU9 254 aa10.67□□□□□ -0.7
PDLIM3-213ENST00000629667 SOSTQ9BQB4 213 aa10.67□□□□□ -0.7
PDLIM3-213ENST00000629667 VPS13BQ7Z7G8 4022 aa10.67□□□□□ -0.7
PDLIM3-213ENST00000629667 TRAV9-2A0A087WT02 112 aa10.66□□□□□ -0.7
PDLIM3-213ENST00000629667 FAM229AH3BQW9 127 aa10.66□□□□□ -0.7
PDLIM3-213ENST00000629667 PAX4O43316 350 aa10.66□□□□□ -0.7
PDLIM3-213ENST00000629667 COX7A2P2O60397 106 aa10.66□□□□□ -0.7
PDLIM3-213ENST00000629667 TNFSF8P32971 234 aa10.66□□□□□ -0.7
PDLIM3-213ENST00000629667 ZBTB8BQ8NAP8 495 aaPredicted RBP10.66□□□□□ -0.7
PDLIM3-213ENST00000629667 MDFICQ9P1T7 246 aa10.66□□□□□ -0.7
PDLIM3-213ENST00000629667 FLG2Q5D862 2391 aaPredicted RBP10.66□□□□□ -0.7
PDLIM3-213ENST00000629667 NPIPB6E9PJ23 425 aa10.65□□□□□ -0.7
PDLIM3-213ENST00000629667 AGPAT2O15120 278 aa10.65□□□□□ -0.7
PDLIM3-213ENST00000629667 ZNF324O75467 553 aaPredicted RBP10.65□□□□□ -0.7
PDLIM3-213ENST00000629667 SLC25A5P05141 298 aaKnown RBP10.65□□□□□ -0.7
PDLIM3-213ENST00000629667 TMEM14EPQ6UXP3 125 aa10.65□□□□□ -0.7
PDLIM3-213ENST00000629667 C11orf72Q8NBR9 251 aa10.65□□□□□ -0.7
PDLIM3-213ENST00000629667 H3BQ15 152 aa10.64□□□□□ -0.71
PDLIM3-213ENST00000629667 IGLC2P0DOY2 106 aa10.64□□□□□ -0.71
PDLIM3-213ENST00000629667 GCSHP23434 173 aa10.64□□□□□ -0.71
PDLIM3-213ENST00000629667 OPCMLQ14982 345 aa10.64□□□□□ -0.71
PDLIM3-213ENST00000629667 C4orf46Q504U0 113 aa10.64□□□□□ -0.71
PDLIM3-213ENST00000629667 PYDC2Q56P42 97 aa10.64□□□□□ -0.71
PDLIM3-213ENST00000629667 MORN5Q5VZ52 161 aa10.64□□□□□ -0.71
PDLIM3-213ENST00000629667 C10orf113Q5VZT2 155 aa10.64□□□□□ -0.71
PDLIM3-213ENST00000629667 RAB2BQ8WUD1 216 aa10.64□□□□□ -0.71
PDLIM3-213ENST00000629667 TMEM37Q8WXS4 190 aa10.64□□□□□ -0.71
PDLIM3-213ENST00000629667 TRIM63Q969Q1 353 aa10.64□□□□□ -0.71
PDLIM3-213ENST00000629667 SAT2Q96F10 170 aaPredicted RBP10.64□□□□□ -0.71
PDLIM3-213ENST00000629667 LY96Q9Y6Y9 160 aa10.64□□□□□ -0.71
PDLIM3-213ENST00000629667 C7orf71A4D174 169 aa10.63□□□□□ -0.71
PDLIM3-213ENST00000629667 GUK1Q16774 197 aa10.63□□□□□ -0.71
PDLIM3-213ENST00000629667 LYPD5Q6UWN5 251 aa10.63□□□□□ -0.71
PDLIM3-213ENST00000629667 EIF4E3Q8N5X7 224 aaKnown RBP10.63□□□□□ -0.71
PDLIM3-213ENST00000629667 ST6GAL2Q96JF0 529 aa10.63□□□□□ -0.71
PDLIM3-213ENST00000629667 MRPS26Q9BYN8 205 aaKnown RBP10.63□□□□□ -0.71
PDLIM3-213ENST00000629667 SLIRPQ9GZT3 109 aaKnown RBP10.63□□□□□ -0.71
PDLIM3-213ENST00000629667 PRO0255Q9UI72 69 aa10.63□□□□□ -0.71
PDLIM3-213ENST00000629667 KLF12Q9Y4X4 402 aa10.63□□□□□ -0.71
PDLIM3-213ENST00000629667 SRRM2Q9UQ35 2752 aaKnown RBP10.63□□□□□ -0.71
PDLIM3-213ENST00000629667 C9orf170A2RU37 121 aa10.62□□□□□ -0.71
PDLIM3-213ENST00000629667 SPINK4O60575 86 aa10.62□□□□□ -0.71
PDLIM3-213ENST00000629667 SCGB1D2O95969 90 aa10.62□□□□□ -0.71
PDLIM3-213ENST00000629667 IGHV3-53P01767 116 aa10.62□□□□□ -0.71
PDLIM3-213ENST00000629667 UBE2MP61081 183 aaKnown RBP10.62□□□□□ -0.71
PDLIM3-213ENST00000629667 SLAQ13239 276 aa10.62□□□□□ -0.71
PDLIM3-213ENST00000629667 MRPL23Q16540 153 aaKnown RBP10.62□□□□□ -0.71
PDLIM3-213ENST00000629667 ANXA2RQ3ZCQ2 193 aa10.62□□□□□ -0.71
PDLIM3-213ENST00000629667 Q6ZSN1 163 aa10.62□□□□□ -0.71
PDLIM3-213ENST00000629667 J3QL48 77 aa10.61□□□□□ -0.71
PDLIM3-213ENST00000629667 TSC22D2O75157 780 aa10.61□□□□□ -0.71
PDLIM3-213ENST00000629667 CRYBA4P53673 196 aa10.61□□□□□ -0.71
PDLIM3-213ENST00000629667 TCL1AP56279 114 aa10.61□□□□□ -0.71
PDLIM3-213ENST00000629667 BTN1A1Q13410 526 aa10.61□□□□□ -0.71
PDLIM3-213ENST00000629667 Q6ZRG5 221 aa10.61□□□□□ -0.71
PDLIM3-213ENST00000629667 NEGR1Q7Z3B1 354 aa10.61□□□□□ -0.71
PDLIM3-213ENST00000629667 DEDD2Q8WXF8 326 aa10.61□□□□□ -0.71
PDLIM3-213ENST00000629667 MGST2Q99735 147 aa10.61□□□□□ -0.71
PDLIM3-213ENST00000629667 LINC00467Q9BRT7 94 aa10.61□□□□□ -0.71
PDLIM3-213ENST00000629667 GGACTQ9BVM4 153 aa10.61□□□□□ -0.71
PDLIM3-213ENST00000629667 DNAJC4Q9NNZ3 241 aa10.61□□□□□ -0.71
PDLIM3-213ENST00000629667 MSRB1Q9NZV6 116 aa10.61□□□□□ -0.71
PDLIM3-213ENST00000629667 HHLA3Q9XRX5 114 aa10.61□□□□□ -0.71
PDLIM3-213ENST00000629667 KLLNB2CW77 178 aa10.6□□□□□ -0.71
PDLIM3-213ENST00000629667 K7EP13 123 aa10.6□□□□□ -0.71
PDLIM3-213ENST00000629667 PRAF2O60831 178 aa10.6□□□□□ -0.71
PDLIM3-213ENST00000629667 MPDU1O75352 247 aa10.6□□□□□ -0.71
PDLIM3-213ENST00000629667 EVI2AP22794 236 aa10.6□□□□□ -0.71
PDLIM3-213ENST00000629667 RNASE4P34096 147 aaKnown RBP10.6□□□□□ -0.71
PDLIM3-213ENST00000629667 TMBIM6P55061 237 aa10.6□□□□□ -0.71
PDLIM3-213ENST00000629667 TAS2R30P59541 319 aa10.6□□□□□ -0.71
PDLIM3-213ENST00000629667 HAMPP81172 84 aa10.6□□□□□ -0.71
PDLIM3-213ENST00000629667 CD300CQ08708 224 aa10.6□□□□□ -0.71
PDLIM3-213ENST00000629667 ARL16Q0P5N6 197 aa10.6□□□□□ -0.71
PDLIM3-213ENST00000629667 ERCC8Q13216 396 aa10.6□□□□□ -0.71
PDLIM3-213ENST00000629667 IBA57Q5T440 356 aaKnown RBP10.6□□□□□ -0.71
PDLIM3-213ENST00000629667 C8orf49Q96NF6 230 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms