RNA–Protein interactions for RNA: ENST00000623253.4

CD99-211, Transcript of CD99 molecule (Xg blood group), humanhuman

TSL 1 (best)

Gene CD99, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD99-211ENST00000623253 RPUSD4Q96CM3 377 aaKnown RBP11.24□□□□□ -0.61
CD99-211ENST00000623253 DNAH5Q8TE73 4624 aa11.23□□□□□ -0.61
CD99-211ENST00000623253 APOBP04114 4563 aaKnown RBP11.23□□□□□ -0.61
CD99-211ENST00000623253 TRAV6A0A075B6T7 132 aa11.23□□□□□ -0.61
CD99-211ENST00000623253 H7BYZ3 331 aa11.23□□□□□ -0.61
CD99-211ENST00000623253 CCSO14618 274 aa11.23□□□□□ -0.61
CD99-211ENST00000623253 AGPAT2O15120 278 aa11.23□□□□□ -0.61
CD99-211ENST00000623253 CXCL2P19875 107 aa11.23□□□□□ -0.61
CD99-211ENST00000623253 ESRGQ1W209 222 aa11.23□□□□□ -0.61
CD99-211ENST00000623253 CCDC28AQ8IWP9 274 aa11.23□□□□□ -0.61
CD99-211ENST00000623253 RNASE8Q8TDE3 154 aaKnown RBP11.23□□□□□ -0.61
CD99-211ENST00000623253 RXFP4Q8TDU9 374 aa11.23□□□□□ -0.61
CD99-211ENST00000623253 ZNF431Q8TF32 576 aaPredicted RBP11.23□□□□□ -0.61
CD99-211ENST00000623253 Q9H3A6 140 aa11.23□□□□□ -0.61
CD99-211ENST00000623253 GAGE12BA1L429 117 aa11.22□□□□□ -0.61
CD99-211ENST00000623253 FAM25EA8MYX2 175 aa11.22□□□□□ -0.61
CD99-211ENST00000623253 GAGE7O76087 117 aa11.22□□□□□ -0.61
CD99-211ENST00000623253 SNRPCP09234 159 aaKnown RBP11.22□□□□□ -0.61
CD99-211ENST00000623253 GAGE12FP0CL80 117 aa11.22□□□□□ -0.61
CD99-211ENST00000623253 GAGE12GP0CL81 117 aa11.22□□□□□ -0.61
CD99-211ENST00000623253 GAGE12IP0CL82 117 aa11.22□□□□□ -0.61
CD99-211ENST00000623253 HOXA5P20719 270 aa11.22□□□□□ -0.61
CD99-211ENST00000623253 LINC00305Q7Z4B0 112 aa11.22□□□□□ -0.61
CD99-211ENST00000623253 CCDC32Q9BV29 185 aa11.22□□□□□ -0.61
CD99-211ENST00000623253 NUDT15Q9NV35 164 aa11.22□□□□□ -0.61
CD99-211ENST00000623253 ZNF586Q9NXT0 402 aa11.22□□□□□ -0.61
CD99-211ENST00000623253 LSM5Q9Y4Y9 91 aaKnown RBP11.22□□□□□ -0.61
CD99-211ENST00000623253 C5orf51A6NDU8 294 aa11.21□□□□□ -0.61
CD99-211ENST00000623253 MRPS12O15235 138 aaKnown RBP11.21□□□□□ -0.61
CD99-211ENST00000623253 RLN2P04090 185 aa11.21□□□□□ -0.61
CD99-211ENST00000623253 BCAP31P51572 246 aa11.21□□□□□ -0.61
CD99-211ENST00000623253 RAB31Q13636 194 aa11.21□□□□□ -0.61
CD99-211ENST00000623253 KIR3DS1Q14943 382 aa11.21□□□□□ -0.61
CD99-211ENST00000623253 LCN15Q6UWW0 184 aa11.21□□□□□ -0.61
CD99-211ENST00000623253 ZNF503Q96F45 646 aa11.21□□□□□ -0.61
CD99-211ENST00000623253 MGST2Q99735 147 aa11.21□□□□□ -0.61
CD99-211ENST00000623253 SEC22CQ9BRL7 303 aa11.21□□□□□ -0.61
CD99-211ENST00000623253 PARD6GQ9BYG4 376 aaPredicted RBP11.21□□□□□ -0.61
CD99-211ENST00000623253 SNURFLB1AK76 121 aa11.2□□□□□ -0.62
CD99-211ENST00000623253 EPM2AB3EWF7 344 aa11.2□□□□□ -0.62
CD99-211ENST00000623253 J3KRW8 73 aa11.2□□□□□ -0.62
CD99-211ENST00000623253 COX7A2P2O60397 106 aa11.2□□□□□ -0.62
CD99-211ENST00000623253 BTF3P20290 206 aaKnown RBP11.2□□□□□ -0.62
CD99-211ENST00000623253 CAV2P51636 162 aa11.2□□□□□ -0.62
CD99-211ENST00000623253 BPIFA4PQ86YQ2 179 aa11.2□□□□□ -0.62
CD99-211ENST00000623253 C12orf45Q8N5I9 185 aaPredicted RBP11.2□□□□□ -0.62
CD99-211ENST00000623253 C2orf50Q96LR7 162 aa11.2□□□□□ -0.62
CD99-211ENST00000623253 SLC50A1Q9BRV3 221 aa11.2□□□□□ -0.62
CD99-211ENST00000623253 A0A1W2PPQ1 181 aa11.19□□□□□ -0.62
CD99-211ENST00000623253 H2AFB2P0C5Z0 115 aa11.19□□□□□ -0.62
CD99-211ENST00000623253 PVALBP20472 110 aaPredicted RBP11.19□□□□□ -0.62
CD99-211ENST00000623253 CAMLGP49069 296 aa11.19□□□□□ -0.62
CD99-211ENST00000623253 C10orf113Q5VZT2 155 aa11.19□□□□□ -0.62
CD99-211ENST00000623253 TMEM37Q8WXS4 190 aa11.19□□□□□ -0.62
CD99-211ENST00000623253 C20orf144Q9BQM9 153 aa11.19□□□□□ -0.62
CD99-211ENST00000623253 UPK3BQ9BT76 320 aa11.19□□□□□ -0.62
CD99-211ENST00000623253 ZNF331Q9NQX6 463 aaPredicted RBP11.19□□□□□ -0.62
CD99-211ENST00000623253 MRPS16Q9Y3D3 137 aaKnown RBP11.19□□□□□ -0.62
CD99-211ENST00000623253 FAM240BA0A1B0GVZ2 78 aa11.18□□□□□ -0.62
CD99-211ENST00000623253 CST7O76096 145 aa11.18□□□□□ -0.62
CD99-211ENST00000623253 GFI1BQ5VTD9 330 aa11.18□□□□□ -0.62
CD99-211ENST00000623253 Q6ZRG5 221 aa11.18□□□□□ -0.62
CD99-211ENST00000623253 NRARPQ7Z6K4 114 aa11.18□□□□□ -0.62
CD99-211ENST00000623253 LINC00612Q8N6U2 182 aa11.18□□□□□ -0.62
CD99-211ENST00000623253 C11orf1Q9H5F2 150 aa11.18□□□□□ -0.62
CD99-211ENST00000623253 DNAJC4Q9NNZ3 241 aa11.18□□□□□ -0.62
CD99-211ENST00000623253 UQCC1Q9NVA1 299 aa11.18□□□□□ -0.62
CD99-211ENST00000623253 FAM24AA6NFZ4 105 aa11.17□□□□□ -0.62
CD99-211ENST00000623253 PRAC2D3DTV9 90 aa11.17□□□□□ -0.62
CD99-211ENST00000623253 H3BTX0 84 aa11.17□□□□□ -0.62
CD99-211ENST00000623253 LINC00315P59091 139 aa11.17□□□□□ -0.62
CD99-211ENST00000623253 S100A10P60903 97 aa11.17□□□□□ -0.62
CD99-211ENST00000623253 OPCMLQ14982 345 aa11.17□□□□□ -0.62
CD99-211ENST00000623253 MZT2BQ6NZ67 158 aa11.17□□□□□ -0.62
CD99-211ENST00000623253 LINC00299Q6ZSB3 139 aa11.17□□□□□ -0.62
CD99-211ENST00000623253 OR1L4Q8NGR5 311 aa11.17□□□□□ -0.62
CD99-211ENST00000623253 TMPRSS5Q9H3S3 457 aa11.17□□□□□ -0.62
CD99-211ENST00000623253 PXMP4Q9Y6I8 212 aa11.17□□□□□ -0.62
CD99-211ENST00000623253 TRAV12-3A0A0B4J271 114 aa11.16□□□□□ -0.62
CD99-211ENST00000623253 S100A11P31949 105 aa11.16□□□□□ -0.62
CD99-211ENST00000623253 FUSP35637 526 aaKnown RBP eCLIP11.16□□□□□ -0.62
CD99-211ENST00000623253 SULT1A1P50225 295 aa11.16□□□□□ -0.62
CD99-211ENST00000623253 VWC2Q2TAL6 325 aa11.16□□□□□ -0.62
CD99-211ENST00000623253 MORN5Q5VZ52 161 aa11.16□□□□□ -0.62
CD99-211ENST00000623253 MIC13Q5XKP0 118 aa11.16□□□□□ -0.62
CD99-211ENST00000623253 STX12Q86Y82 276 aa11.16□□□□□ -0.62
CD99-211ENST00000623253 PFDN5Q99471 154 aa11.16□□□□□ -0.62
CD99-211ENST00000623253 LYRM2Q9NU23 88 aaPredicted RBP11.16□□□□□ -0.62
CD99-211ENST00000623253 WDR83OSQ9Y284 106 aa11.16□□□□□ -0.62
CD99-211ENST00000623253 HERC1Q15751 4861 aa11.15□□□□□ -0.62
CD99-211ENST00000623253 H3BNG1 76 aa11.15□□□□□ -0.62
CD99-211ENST00000623253 INAFM2P0DMQ5 153 aa11.15□□□□□ -0.62
CD99-211ENST00000623253 IGLC2P0DOY2 106 aa11.15□□□□□ -0.62
CD99-211ENST00000623253 HBG1P69891 147 aa11.15□□□□□ -0.62
CD99-211ENST00000623253 HBG2P69892 147 aa11.15□□□□□ -0.62
CD99-211ENST00000623253 Q6ZTI0 123 aa11.15□□□□□ -0.62
CD99-211ENST00000623253 S100ZQ8WXG8 99 aa11.15□□□□□ -0.62
CD99-211ENST00000623253 PTTG2Q9NZH5 202 aa11.15□□□□□ -0.62
CD99-211ENST00000623253 TRGV2A0A075B6R0 118 aa11.14□□□□□ -0.63
CD99-211ENST00000623253 UBE2L5PA0A1B0GUS4 154 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms