RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 SPRY2O43597 315 aa13.61□□□□□ -0.23
CIRBP-245ENST00000621399 SEC11BP0C7V7 166 aa13.61□□□□□ -0.23
CIRBP-245ENST00000621399 STAG3L2P0CL84 134 aa13.61□□□□□ -0.23
CIRBP-245ENST00000621399 STAG3L3P0CL85 134 aa13.61□□□□□ -0.23
CIRBP-245ENST00000621399 PRB4P10163 310 aaPredicted RBP13.61□□□□□ -0.23
CIRBP-245ENST00000621399 CNN1P51911 297 aaKnown RBP13.61□□□□□ -0.23
CIRBP-245ENST00000621399 HIST1H1AQ02539 215 aaPredicted RBP13.61□□□□□ -0.23
CIRBP-245ENST00000621399 BAP18Q8IXM2 172 aa13.61□□□□□ -0.23
CIRBP-245ENST00000621399 EXOC3-AS1Q8N2X6 119 aa13.61□□□□□ -0.23
CIRBP-245ENST00000621399 OR8A1Q8NGG7 326 aa13.61□□□□□ -0.23
CIRBP-245ENST00000621399 CLUHP3Q96NS8 147 aa13.61□□□□□ -0.23
CIRBP-245ENST00000621399 ARL14EPLP0DKL9 152 aa13.6□□□□□ -0.23
CIRBP-245ENST00000621399 C4BPBP20851 252 aa13.6□□□□□ -0.23
CIRBP-245ENST00000621399 RANP62826 216 aaKnown RBP13.6□□□□□ -0.23
CIRBP-245ENST00000621399 RNF183Q96D59 192 aa13.6□□□□□ -0.23
CIRBP-245ENST00000621399 PHYHIPLQ96FC7 376 aa13.6□□□□□ -0.23
CIRBP-245ENST00000621399 OVOL2Q9BRP0 275 aa13.6□□□□□ -0.23
CIRBP-245ENST00000621399 PRELID1Q9Y255 219 aa13.6□□□□□ -0.23
CIRBP-245ENST00000621399 TP53TG1Q9Y2A0 90 aa13.6□□□□□ -0.23
CIRBP-245ENST00000621399 PRAC2D3DTV9 90 aa13.59□□□□□ -0.23
CIRBP-245ENST00000621399 GIG44P09565 113 aaPredicted RBP13.59□□□□□ -0.23
CIRBP-245ENST00000621399 ICAM4Q14773 271 aa13.59□□□□□ -0.23
CIRBP-245ENST00000621399 C9orf62Q8N4C0 152 aa13.59□□□□□ -0.23
CIRBP-245ENST00000621399 OR10J6PQ8NGY7 276 aa13.59□□□□□ -0.23
CIRBP-245ENST00000621399 STOML3Q8TAV4 291 aa13.59□□□□□ -0.23
CIRBP-245ENST00000621399 MRPL53Q96EL3 112 aaKnown RBP13.59□□□□□ -0.23
CIRBP-245ENST00000621399 CTXND1A0A1B0GTU2 59 aa13.58□□□□□ -0.24
CIRBP-245ENST00000621399 M0R3E3 92 aa13.58□□□□□ -0.24
CIRBP-245ENST00000621399 CXorf1O96002 111 aa13.58□□□□□ -0.24
CIRBP-245ENST00000621399 FXYD7P58549 80 aa13.58□□□□□ -0.24
CIRBP-245ENST00000621399 ZNF726P1Q15940 193 aa13.58□□□□□ -0.24
CIRBP-245ENST00000621399 SSX7Q7RTT5 188 aa13.58□□□□□ -0.24
CIRBP-245ENST00000621399 LYPD1Q8N2G4 141 aa13.58□□□□□ -0.24
CIRBP-245ENST00000621399 C1QTNF4Q9BXJ3 329 aa13.58□□□□□ -0.24
CIRBP-245ENST00000621399 SLC35B3Q9H1N7 401 aa13.58□□□□□ -0.24
CIRBP-245ENST00000621399 PPP1R14DQ9NXH3 145 aa13.58□□□□□ -0.24
CIRBP-245ENST00000621399 XCL2Q9UBD3 114 aa13.58□□□□□ -0.24
CIRBP-245ENST00000621399 AGRNO00468 2067 aa13.57□□□□□ -0.24
CIRBP-245ENST00000621399 UMAD1C9J7I0 102 aa13.57□□□□□ -0.24
CIRBP-245ENST00000621399 GCHFRP30047 84 aa13.57□□□□□ -0.24
CIRBP-245ENST00000621399 TMED6Q8WW62 240 aa13.57□□□□□ -0.24
CIRBP-245ENST00000621399 Q9H3A6 140 aa13.57□□□□□ -0.24
CIRBP-245ENST00000621399 TENM3Q9P273 2699 aa13.57□□□□□ -0.24
CIRBP-245ENST00000621399 A8MTW9 85 aa13.56□□□□□ -0.24
CIRBP-245ENST00000621399 EIF5AL1Q6IS14 154 aaKnown RBP13.56□□□□□ -0.24
CIRBP-245ENST00000621399 AMTNQ6UX39 209 aa13.56□□□□□ -0.24
CIRBP-245ENST00000621399 SLC51BQ86UW2 128 aa13.56□□□□□ -0.24
CIRBP-245ENST00000621399 IQCF2Q8IXL9 164 aa13.56□□□□□ -0.24
CIRBP-245ENST00000621399 PLA2G2EQ9NZK7 142 aa13.56□□□□□ -0.24
CIRBP-245ENST00000621399 CSN1S1P47710 185 aa13.55□□□□□ -0.24
CIRBP-245ENST00000621399 FHITP49789 147 aa13.55□□□□□ -0.24
CIRBP-245ENST00000621399 TMEM167BQ9NRX6 74 aa13.55□□□□□ -0.24
CIRBP-245ENST00000621399 STAB2Q8WWQ8 2551 aa13.55□□□□□ -0.24
CIRBP-245ENST00000621399 PGPA6NDG6 321 aa13.54□□□□□ -0.24
CIRBP-245ENST00000621399 NKX2-5P52952 324 aaPredicted RBP13.54□□□□□ -0.24
CIRBP-245ENST00000621399 FAM74A1Q5RGS3 127 aa13.54□□□□□ -0.24
CIRBP-245ENST00000621399 CSNK1G2-AS1Q8NCQ2 148 aa13.54□□□□□ -0.24
CIRBP-245ENST00000621399 OR11H2Q8NH07 326 aa13.54□□□□□ -0.24
CIRBP-245ENST00000621399 FAM213BQ8TBF2 198 aa13.54□□□□□ -0.24
CIRBP-245ENST00000621399 SUN5Q8TC36 379 aa13.54□□□□□ -0.24
CIRBP-245ENST00000621399 RARRES2Q99969 163 aa13.54□□□□□ -0.24
CIRBP-245ENST00000621399 OTORQ9NRC9 128 aa13.54□□□□□ -0.24
CIRBP-245ENST00000621399 MAP1LC3B2A6NCE7 125 aa13.53□□□□□ -0.24
CIRBP-245ENST00000621399 NPIPB6E9PJ23 425 aa13.53□□□□□ -0.24
CIRBP-245ENST00000621399 FGF8P55075 233 aaPredicted RBP13.53□□□□□ -0.24
CIRBP-245ENST00000621399 SPINK13Q1W4C9 94 aa13.53□□□□□ -0.24
CIRBP-245ENST00000621399 DPPA3Q6W0C5 159 aa13.53□□□□□ -0.24
CIRBP-245ENST00000621399 CMTM2Q8TAZ6 248 aa13.53□□□□□ -0.24
CIRBP-245ENST00000621399 RXFP4Q8TDU9 374 aa13.53□□□□□ -0.24
CIRBP-245ENST00000621399 MAP1LC3BQ9GZQ8 125 aa13.53□□□□□ -0.24
CIRBP-245ENST00000621399 BOLA2-SMG1P6H3BVE0 249 aa13.52□□□□□ -0.25
CIRBP-245ENST00000621399 M0R2Z0 102 aa13.52□□□□□ -0.25
CIRBP-245ENST00000621399 AMBPP02760 352 aa13.52□□□□□ -0.25
CIRBP-245ENST00000621399 ERCC8Q13216 396 aa13.52□□□□□ -0.25
CIRBP-245ENST00000621399 TMPRSS5Q9H3S3 457 aa13.52□□□□□ -0.25
CIRBP-245ENST00000621399 IGKV2-40A0A087WW87 121 aaPredicted RBP13.51□□□□□ -0.25
CIRBP-245ENST00000621399 IGKV2D-40P01614 121 aaPredicted RBP13.51□□□□□ -0.25
CIRBP-245ENST00000621399 SFT2D1Q8WV19 159 aa13.51□□□□□ -0.25
CIRBP-245ENST00000621399 LINC00477Q96M19 166 aa13.51□□□□□ -0.25
CIRBP-245ENST00000621399 CT45A10P0DMU9 189 aa13.5□□□□□ -0.25
CIRBP-245ENST00000621399 TSPOP30536 169 aa13.5□□□□□ -0.25
CIRBP-245ENST00000621399 RAB5CP51148 216 aa13.5□□□□□ -0.25
CIRBP-245ENST00000621399 MBD3L1Q8WWY6 194 aa13.5□□□□□ -0.25
CIRBP-245ENST00000621399 IGF2BP2-AS1Q96M15 143 aa13.5□□□□□ -0.25
CIRBP-245ENST00000621399 WWC2-AS2Q96NR7 200 aa13.5□□□□□ -0.25
CIRBP-245ENST00000621399 AGPAT4-IT1Q9H0P7 198 aa13.5□□□□□ -0.25
CIRBP-245ENST00000621399 RPH3ALQ9UNE2 315 aa13.5□□□□□ -0.25
CIRBP-245ENST00000621399 TRAV12-2A0A075B6T6 113 aa13.49□□□□□ -0.25
CIRBP-245ENST00000621399 IGHV3OR16-12A0A075B7B8 117 aa13.49□□□□□ -0.25
CIRBP-245ENST00000621399 DIRC3C9JPN6 131 aa13.49□□□□□ -0.25
CIRBP-245ENST00000621399 INSP01308 110 aa13.49□□□□□ -0.25
CIRBP-245ENST00000621399 H2AFB1P0C5Y9 115 aa13.49□□□□□ -0.25
CIRBP-245ENST00000621399 CDKN1BP46527 198 aa13.49□□□□□ -0.25
CIRBP-245ENST00000621399 TMEM78Q5T7P6 136 aa13.49□□□□□ -0.25
CIRBP-245ENST00000621399 C9orf47Q6ZRZ4 202 aa13.49□□□□□ -0.25
CIRBP-245ENST00000621399 VGLL1Q99990 258 aa13.49□□□□□ -0.25
CIRBP-245ENST00000621399 EDA2RQ9HAV5 297 aa13.49□□□□□ -0.25
CIRBP-245ENST00000621399 GOLT1BQ9Y3E0 138 aa13.49□□□□□ -0.25
CIRBP-245ENST00000621399 RBAKDNA6NC62 111 aa13.48□□□□□ -0.25
CIRBP-245ENST00000621399 ZNF705EA8MWA4 302 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms