RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 THYN1Q9P016 225 aa13.6□□□□□ -0.23
CNOT3-209ENST00000617930 IGHV3OR16-8A0A075B7F1 116 aa13.59□□□□□ -0.23
CNOT3-209ENST00000617930 M0QZK8 103 aa13.59□□□□□ -0.23
CNOT3-209ENST00000617930 RHOGP84095 191 aa13.59□□□□□ -0.23
CNOT3-209ENST00000617930 MRPL52Q86TS9 123 aaKnown RBP13.59□□□□□ -0.23
CNOT3-209ENST00000617930 NUP35Q8NFH5 326 aa13.59□□□□□ -0.23
CNOT3-209ENST00000617930 MOB4Q9Y3A3 225 aa13.59□□□□□ -0.23
CNOT3-209ENST00000617930 TLN2Q9Y4G6 2542 aa13.59□□□□□ -0.23
CNOT3-209ENST00000617930 ANK3Q12955 4377 aaKnown RBP13.59□□□□□ -0.23
CNOT3-209ENST00000617930 LY6EQ16553 131 aa13.59□□□□□ -0.23
CNOT3-209ENST00000617930 Q6ZS46 218 aa13.59□□□□□ -0.23
CNOT3-209ENST00000617930 CCDC140Q96MF4 163 aa13.59□□□□□ -0.23
CNOT3-209ENST00000617930 MXRA5Q9NR99 2828 aa13.59□□□□□ -0.23
CNOT3-209ENST00000617930 TRBV19A0A075B6N1 114 aa13.58□□□□□ -0.24
CNOT3-209ENST00000617930 TCRAP04437 139 aa13.58□□□□□ -0.24
CNOT3-209ENST00000617930 NTF3P20783 257 aa13.58□□□□□ -0.24
CNOT3-209ENST00000617930 TSKUQ8WUA8 353 aa13.58□□□□□ -0.24
CNOT3-209ENST00000617930 LINC00322Q6ZN03 302 aaPredicted RBP13.57□□□□□ -0.24
CNOT3-209ENST00000617930 C18orf32Q8TCD1 76 aa13.57□□□□□ -0.24
CNOT3-209ENST00000617930 BORCS7Q96B45 105 aa13.57□□□□□ -0.24
CNOT3-209ENST00000617930 NEU1Q99519 415 aa13.57□□□□□ -0.24
CNOT3-209ENST00000617930 TRAV8-1A0A0A6YYK1 113 aa13.57□□□□□ -0.24
CNOT3-209ENST00000617930 A6NDX4 124 aa13.57□□□□□ -0.24
CNOT3-209ENST00000617930 H3BUX3 64 aa13.57□□□□□ -0.24
CNOT3-209ENST00000617930 IGLV2-11P01706 119 aa13.57□□□□□ -0.24
CNOT3-209ENST00000617930 CLEC3BP05452 202 aa13.57□□□□□ -0.24
CNOT3-209ENST00000617930 GPR183P32249 361 aa13.57□□□□□ -0.24
CNOT3-209ENST00000617930 Q8N976 141 aa13.57□□□□□ -0.24
CNOT3-209ENST00000617930 C5orf17Q8NAS9 161 aa13.57□□□□□ -0.24
CNOT3-209ENST00000617930 SMIM12Q96EX1 92 aa13.57□□□□□ -0.24
CNOT3-209ENST00000617930 MLST8Q9BVC4 326 aa13.57□□□□□ -0.24
CNOT3-209ENST00000617930 HIGD1CA8MV81 97 aa13.56□□□□□ -0.24
CNOT3-209ENST00000617930 FSHBP01225 129 aa13.56□□□□□ -0.24
CNOT3-209ENST00000617930 GATA3P23771 443 aa13.56□□□□□ -0.24
CNOT3-209ENST00000617930 SIGLEC15Q6ZMC9 328 aa13.56□□□□□ -0.24
CNOT3-209ENST00000617930 BPIFA4PQ86YQ2 179 aa13.56□□□□□ -0.24
CNOT3-209ENST00000617930 FAM19A2Q8N3H0 131 aa13.56□□□□□ -0.24
CNOT3-209ENST00000617930 TXN2Q99757 166 aa13.56□□□□□ -0.24
CNOT3-209ENST00000617930 RPLP1P05386 114 aaKnown RBP13.56□□□□□ -0.24
CNOT3-209ENST00000617930 BLCAPP62952 87 aa13.56□□□□□ -0.24
CNOT3-209ENST00000617930 SPATA45Q537H7 98 aa13.56□□□□□ -0.24
CNOT3-209ENST00000617930 GPR82Q96P67 336 aa13.56□□□□□ -0.24
CNOT3-209ENST00000617930 OTORQ9NRC9 128 aa13.56□□□□□ -0.24
CNOT3-209ENST00000617930 ACANP16112 2415 aa13.55□□□□□ -0.24
CNOT3-209ENST00000617930 ZNF785A8K8V0 405 aa13.55□□□□□ -0.24
CNOT3-209ENST00000617930 CAMPP49913 170 aa13.55□□□□□ -0.24
CNOT3-209ENST00000617930 ATP5L2Q7Z4Y8 100 aa13.55□□□□□ -0.24
CNOT3-209ENST00000617930 NIT1Q86X76 327 aa13.55□□□□□ -0.24
CNOT3-209ENST00000617930 FMC1Q96HJ9 113 aa13.55□□□□□ -0.24
CNOT3-209ENST00000617930 RPP21Q9H633 154 aaKnown RBP13.55□□□□□ -0.24
CNOT3-209ENST00000617930 ZFAND3Q9H8U3 227 aa13.55□□□□□ -0.24
CNOT3-209ENST00000617930 SMAD5-AS1Q9Y6J3 95 aa13.55□□□□□ -0.24
CNOT3-209ENST00000617930 C3orf79P0CE67 100 aa13.54□□□□□ -0.24
CNOT3-209ENST00000617930 G0S2P27469 103 aa13.54□□□□□ -0.24
CNOT3-209ENST00000617930 CRIP2P52943 208 aaPredicted RBP13.54□□□□□ -0.24
CNOT3-209ENST00000617930 GDF5OSQ5U4N7 250 aa13.54□□□□□ -0.24
CNOT3-209ENST00000617930 ASCL2Q99929 193 aa13.54□□□□□ -0.24
CNOT3-209ENST00000617930 SSBP4Q9BWG4 385 aaPredicted RBP13.54□□□□□ -0.24
CNOT3-209ENST00000617930 TRAV41A0A0B4J266 112 aa13.54□□□□□ -0.24
CNOT3-209ENST00000617930 HSBP1O75506 76 aa13.54□□□□□ -0.24
CNOT3-209ENST00000617930 LTAP01374 205 aa13.54□□□□□ -0.24
CNOT3-209ENST00000617930 CLEC19AQ6UXS0 136 aa13.54□□□□□ -0.24
CNOT3-209ENST00000617930 CLPSL1A2RUU4 121 aa13.53□□□□□ -0.24
CNOT3-209ENST00000617930 SMAD7O15105 426 aaKnown RBP13.53□□□□□ -0.24
CNOT3-209ENST00000617930 KRTAP1-1Q07627 177 aa13.53□□□□□ -0.24
CNOT3-209ENST00000617930 BATFQ16520 125 aa13.53□□□□□ -0.24
CNOT3-209ENST00000617930 M0R3E3 92 aa13.52□□□□□ -0.24
CNOT3-209ENST00000617930 P01737 135 aa13.52□□□□□ -0.24
CNOT3-209ENST00000617930 KLF5Q13887 457 aaPredicted RBP13.52□□□□□ -0.24
CNOT3-209ENST00000617930 DEFB112Q30KQ8 113 aa13.52□□□□□ -0.24
CNOT3-209ENST00000617930 RNASEKQ6P5S7 137 aaKnown RBP13.52□□□□□ -0.24
CNOT3-209ENST00000617930 GOLT1AQ6ZVE7 132 aa13.52□□□□□ -0.24
CNOT3-209ENST00000617930 TCF24Q7RTU0 167 aa13.52□□□□□ -0.24
CNOT3-209ENST00000617930 OR4F17Q8NGA8 305 aa13.52□□□□□ -0.24
CNOT3-209ENST00000617930 MYO9AB2RTY4 2548 aa13.52□□□□□ -0.24
CNOT3-209ENST00000617930 J3QLI3 93 aa13.52□□□□□ -0.25
CNOT3-209ENST00000617930 M0R2Z0 102 aa13.52□□□□□ -0.25
CNOT3-209ENST00000617930 HBBP68871 147 aa13.52□□□□□ -0.25
CNOT3-209ENST00000617930 DAZAP1Q96EP5 407 aaKnown RBP13.52□□□□□ -0.25
CNOT3-209ENST00000617930 ALKBH7Q9BT30 221 aaPredicted RBP13.52□□□□□ -0.25
CNOT3-209ENST00000617930 SONP18583 2426 aaKnown RBP13.52□□□□□ -0.25
CNOT3-209ENST00000617930 A8MWL6 223 aa13.51□□□□□ -0.25
CNOT3-209ENST00000617930 IGF1P05019 195 aa13.51□□□□□ -0.25
CNOT3-209ENST00000617930 PPIFP30405 207 aaKnown RBP13.51□□□□□ -0.25
CNOT3-209ENST00000617930 OR2D3Q8NGH3 330 aa13.51□□□□□ -0.25
CNOT3-209ENST00000617930 FOXC2Q99958 501 aa13.51□□□□□ -0.25
CNOT3-209ENST00000617930 ZNF492Q9P255 531 aa13.51□□□□□ -0.25
CNOT3-209ENST00000617930 A0A1B0GXF2 115 aa13.51□□□□□ -0.25
CNOT3-209ENST00000617930 IGHG2P01859 326 aa13.51□□□□□ -0.25
CNOT3-209ENST00000617930 ZNF25P17030 456 aaPredicted RBP13.51□□□□□ -0.25
CNOT3-209ENST00000617930 CTRLP40313 264 aa13.51□□□□□ -0.25
CNOT3-209ENST00000617930 CT83Q5H943 113 aa13.51□□□□□ -0.25
CNOT3-209ENST00000617930 IGHG4P01861 327 aa13.5□□□□□ -0.25
CNOT3-209ENST00000617930 APOHP02749 345 aaPredicted RBP13.5□□□□□ -0.25
CNOT3-209ENST00000617930 Q86TA4 180 aa13.5□□□□□ -0.25
CNOT3-209ENST00000617930 UQCR10Q9UDW1 63 aa13.5□□□□□ -0.25
CNOT3-209ENST00000617930 NOTCH2Q04721 2471 aa13.49□□□□□ -0.25
CNOT3-209ENST00000617930 CYB5R2Q6BCY4 276 aa13.49□□□□□ -0.25
CNOT3-209ENST00000617930 IL17RELQ6ZVW7 336 aa13.49□□□□□ -0.25
CNOT3-209ENST00000617930 RABAC1Q9UI14 185 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms