RNA–Protein interactions for RNA: ENST00000617767.4

CPNE4-214, Transcript of copine 4, humanhuman

TSL 2 BASIC

Gene CPNE4, Length 3,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-214ENST00000617767 PRO0461Q9UI25 63 aa4.47□□□□□ -1.69
CPNE4-214ENST00000617767 ANKRD17O75179 2603 aaKnown RBP4.47□□□□□ -1.69
CPNE4-214ENST00000617767 IGHV3-72A0A0B4J1Y9 119 aa4.47□□□□□ -1.69
CPNE4-214ENST00000617767 CTXND1A0A1B0GTU2 59 aa4.47□□□□□ -1.69
CPNE4-214ENST00000617767 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.47□□□□□ -1.69
CPNE4-214ENST00000617767 TMEM213A2RRL7 107 aa4.47□□□□□ -1.69
CPNE4-214ENST00000617767 TMEM8BA6NDV4 472 aa4.47□□□□□ -1.69
CPNE4-214ENST00000617767 CRXO43186 299 aaPredicted RBP4.47□□□□□ -1.69
CPNE4-214ENST00000617767 SYNGR2O43760 224 aa4.47□□□□□ -1.69
CPNE4-214ENST00000617767 PROP1O75360 226 aa4.47□□□□□ -1.69
CPNE4-214ENST00000617767 HLA-DQA1P01909 254 aa4.47□□□□□ -1.69
CPNE4-214ENST00000617767 AMY1AP04745 511 aa4.47□□□□□ -1.69
CPNE4-214ENST00000617767 SRD5A1P18405 259 aa4.47□□□□□ -1.69
CPNE4-214ENST00000617767 FXYD2P54710 66 aa4.47□□□□□ -1.69
CPNE4-214ENST00000617767 TAS2R45P59539 299 aa4.47□□□□□ -1.69
CPNE4-214ENST00000617767 FXYD3Q14802 87 aa4.47□□□□□ -1.69
CPNE4-214ENST00000617767 POU2AF1Q16633 256 aa4.47□□□□□ -1.69
CPNE4-214ENST00000617767 H2BFWTQ7Z2G1 175 aa4.47□□□□□ -1.69
CPNE4-214ENST00000617767 ZNF525Q8N782 197 aa4.47□□□□□ -1.69
CPNE4-214ENST00000617767 FAM169BQ8N8A8 192 aa4.47□□□□□ -1.69
CPNE4-214ENST00000617767 OR13C6PQ8NH95 151 aa4.47□□□□□ -1.69
CPNE4-214ENST00000617767 TMEM133Q9H2Q1 129 aa4.47□□□□□ -1.69
CPNE4-214ENST00000617767 SONP18583 2426 aaKnown RBP4.46□□□□□ -1.7
CPNE4-214ENST00000617767 IGHV3-48P01763 117 aa4.46□□□□□ -1.7
CPNE4-214ENST00000617767 CX3CL1P78423 397 aa4.46□□□□□ -1.7
CPNE4-214ENST00000617767 ZNF295-AS1Q8N0V1 137 aa4.46□□□□□ -1.7
CPNE4-214ENST00000617767 TEX45Q8NA69 505 aa4.46□□□□□ -1.7
CPNE4-214ENST00000617767 CALYQ9NYX4 217 aa4.46□□□□□ -1.7
CPNE4-214ENST00000617767 TRAV4A0A0B4J268 109 aa4.46□□□□□ -1.7
CPNE4-214ENST00000617767 ID3Q02535 119 aa4.46□□□□□ -1.7
CPNE4-214ENST00000617767 TEPPQ6URK8 271 aa4.46□□□□□ -1.7
CPNE4-214ENST00000617767 Q6ZS49 121 aa4.46□□□□□ -1.7
CPNE4-214ENST00000617767 NHP2Q9NX24 153 aaKnown RBP4.46□□□□□ -1.7
CPNE4-214ENST00000617767 SCO2A0A1W2PP80 73 aa4.45□□□□□ -1.7
CPNE4-214ENST00000617767 E7EQL1 145 aa4.45□□□□□ -1.7
CPNE4-214ENST00000617767 C15orf65H3BRN8 121 aa4.45□□□□□ -1.7
CPNE4-214ENST00000617767 MGST3O14880 152 aa4.45□□□□□ -1.7
CPNE4-214ENST00000617767 ABHD12Q8N2K0 398 aa4.45□□□□□ -1.7
CPNE4-214ENST00000617767 RNF125Q96EQ8 232 aa4.45□□□□□ -1.7
CPNE4-214ENST00000617767 LINC01587Q99440 93 aa4.45□□□□□ -1.7
CPNE4-214ENST00000617767 TMEM160Q9NX00 188 aa4.45□□□□□ -1.7
CPNE4-214ENST00000617767 C1RLQ9NZP8 487 aa4.45□□□□□ -1.7
CPNE4-214ENST00000617767 CHD6Q8TD26 2715 aa4.45□□□□□ -1.7
CPNE4-214ENST00000617767 C17orf100A8MU93 164 aa4.45□□□□□ -1.7
CPNE4-214ENST00000617767 J3KT08 172 aa4.45□□□□□ -1.7
CPNE4-214ENST00000617767 DLL1O00548 723 aa4.45□□□□□ -1.7
CPNE4-214ENST00000617767 SAA2P0DJI9 122 aaPredicted RBP4.45□□□□□ -1.7
CPNE4-214ENST00000617767 RPL31P62899 125 aaKnown RBP4.45□□□□□ -1.7
CPNE4-214ENST00000617767 RTL8BQ17RB0 113 aa4.45□□□□□ -1.7
CPNE4-214ENST00000617767 BCL6BQ8N143 479 aaPredicted RBP4.45□□□□□ -1.7
CPNE4-214ENST00000617767 OR9G4Q8NGQ1 327 aa4.45□□□□□ -1.7
CPNE4-214ENST00000617767 RASL10AQ92737 203 aa4.45□□□□□ -1.7
CPNE4-214ENST00000617767 TAF15Q92804 592 aaKnown RBP eCLIP4.45□□□□□ -1.7
CPNE4-214ENST00000617767 URB1-AS1Q96HZ7 61 aa4.45□□□□□ -1.7
CPNE4-214ENST00000617767 SLC25A10Q9UBX3 287 aaPredicted RBP4.45□□□□□ -1.7
CPNE4-214ENST00000617767 V9GYV3 84 aa4.45□□□□□ -1.7
CPNE4-214ENST00000617767 TRBV6-6A0A0A6YYG2 114 aa4.45□□□□□ -1.7
CPNE4-214ENST00000617767 IGHV1-24A0A0C4DH33 117 aa4.45□□□□□ -1.7
CPNE4-214ENST00000617767 A0A1W2PPI3 338 aa4.45□□□□□ -1.7
CPNE4-214ENST00000617767 FAM90A26D6RGX4 464 aa4.45□□□□□ -1.7
CPNE4-214ENST00000617767 E9PLD3 99 aa4.45□□□□□ -1.7
CPNE4-214ENST00000617767 CRLF1O75462 422 aa4.45□□□□□ -1.7
CPNE4-214ENST00000617767 SNCGO76070 127 aa4.45□□□□□ -1.7
CPNE4-214ENST00000617767 IGKV1-16P04430 117 aa4.45□□□□□ -1.7
CPNE4-214ENST00000617767 FAM106CPP0CH98 169 aa4.45□□□□□ -1.7
CPNE4-214ENST00000617767 FAM106AQ4KMX7 169 aa4.45□□□□□ -1.7
CPNE4-214ENST00000617767 Q6ZQT7 251 aa4.45□□□□□ -1.7
CPNE4-214ENST00000617767 FLYWCH2Q96CP2 140 aaKnown RBP4.45□□□□□ -1.7
CPNE4-214ENST00000617767 ADTRPQ96IZ2 230 aa4.45□□□□□ -1.7
CPNE4-214ENST00000617767 LINC00477Q96M19 166 aa4.45□□□□□ -1.7
CPNE4-214ENST00000617767 GAFA1Q96PS6 74 aa4.45□□□□□ -1.7
CPNE4-214ENST00000617767 NOTCH2Q04721 2471 aa4.44□□□□□ -1.7
CPNE4-214ENST00000617767 IGLV3-9A0A075B6K5 115 aa4.44□□□□□ -1.7
CPNE4-214ENST00000617767 IGLL5B9A064 214 aa4.44□□□□□ -1.7
CPNE4-214ENST00000617767 SMAD7O15105 426 aaKnown RBP4.44□□□□□ -1.7
CPNE4-214ENST00000617767 NPFFO15130 113 aa4.44□□□□□ -1.7
CPNE4-214ENST00000617767 TFF3Q07654 80 aa4.44□□□□□ -1.7
CPNE4-214ENST00000617767 HRCT1Q6UXD1 115 aa4.44□□□□□ -1.7
CPNE4-214ENST00000617767 OR4X2Q8NGF9 303 aa4.44□□□□□ -1.7
CPNE4-214ENST00000617767 MRAPQ8TCY5 172 aa4.44□□□□□ -1.7
CPNE4-214ENST00000617767 CARD19Q96LW7 228 aa4.44□□□□□ -1.7
CPNE4-214ENST00000617767 RNASE7Q9H1E1 156 aaKnown RBP4.44□□□□□ -1.7
CPNE4-214ENST00000617767 HEYLQ9NQ87 328 aaPredicted RBP4.44□□□□□ -1.7
CPNE4-214ENST00000617767 ZNF331Q9NQX6 463 aaPredicted RBP4.44□□□□□ -1.7
CPNE4-214ENST00000617767 KLK5Q9Y337 293 aaPredicted RBP4.44□□□□□ -1.7
CPNE4-214ENST00000617767 LINC01548A6NM66 108 aa4.44□□□□□ -1.7
CPNE4-214ENST00000617767 PRB4P10163 310 aaPredicted RBP4.44□□□□□ -1.7
CPNE4-214ENST00000617767 DUTP33316 252 aaKnown RBP4.44□□□□□ -1.7
CPNE4-214ENST00000617767 LOXL3P58215 753 aa4.44□□□□□ -1.7
CPNE4-214ENST00000617767 SLC38A11Q08AI6 406 aa4.44□□□□□ -1.7
CPNE4-214ENST00000617767 EFNB3Q15768 340 aa4.44□□□□□ -1.7
CPNE4-214ENST00000617767 C17orf58Q2M2W7 97 aa4.44□□□□□ -1.7
CPNE4-214ENST00000617767 LCNL1Q6ZST4 164 aa4.44□□□□□ -1.7
CPNE4-214ENST00000617767 S1PR3Q99500 378 aa4.44□□□□□ -1.7
CPNE4-214ENST00000617767 SLC25A33Q9BSK2 321 aa4.44□□□□□ -1.7
CPNE4-214ENST00000617767 C1orf43Q9BWL3 253 aa4.44□□□□□ -1.7
CPNE4-214ENST00000617767 IFI27L2Q9H2X8 130 aa4.44□□□□□ -1.7
CPNE4-214ENST00000617767 C21orf62Q9NYP8 219 aa4.44□□□□□ -1.7
CPNE4-214ENST00000617767 TMSB15BA0A087X1C1 80 aa4.44□□□□□ -1.7
CPNE4-214ENST00000617767 OOSP1A8MZH6 123 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms