RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 HIGD1BQ9P298 99 aa17.38■□□□□ 0.37
POLR2J3-220ENST00000613744 PRR31Q5SQ13 230 aa17.37■□□□□ 0.37
POLR2J3-220ENST00000613744 PIP4P2Q8N4L2 257 aa17.37■□□□□ 0.37
POLR2J3-220ENST00000613744 BLNKQ8WV28 456 aa17.37■□□□□ 0.37
POLR2J3-220ENST00000613744 CCL17Q92583 94 aa17.37■□□□□ 0.37
POLR2J3-220ENST00000613744 RAB1BQ9H0U4 201 aa17.37■□□□□ 0.37
POLR2J3-220ENST00000613744 IGFBPL1Q8WX77 278 aa17.36■□□□□ 0.37
POLR2J3-220ENST00000613744 OTORQ9NRC9 128 aa17.36■□□□□ 0.37
POLR2J3-220ENST00000613744 IGHV3OR15-7A0A075B7D8 119 aa17.36■□□□□ 0.37
POLR2J3-220ENST00000613744 IGKV1-16P04430 117 aa17.36■□□□□ 0.37
POLR2J3-220ENST00000613744 CD300EQ496F6 205 aaPredicted RBP17.36■□□□□ 0.37
POLR2J3-220ENST00000613744 UTF1Q5T230 341 aa17.36■□□□□ 0.37
POLR2J3-220ENST00000613744 FOXI2Q6ZQN5 318 aa17.36■□□□□ 0.37
POLR2J3-220ENST00000613744 ZNF493Q6ZR52 646 aa17.36■□□□□ 0.37
POLR2J3-220ENST00000613744 ZNRF1Q8ND25 227 aa17.36■□□□□ 0.37
POLR2J3-220ENST00000613744 Q9H3A6 140 aa17.36■□□□□ 0.37
POLR2J3-220ENST00000613744 A0A096LNJ9 63 aa17.35■□□□□ 0.37
POLR2J3-220ENST00000613744 PPIAL4CA0A0B4J2A2 164 aa17.35■□□□□ 0.37
POLR2J3-220ENST00000613744 GP9P14770 177 aa17.35■□□□□ 0.37
POLR2J3-220ENST00000613744 HOXB4P17483 251 aaPredicted RBP17.35■□□□□ 0.37
POLR2J3-220ENST00000613744 OR10X1Q8NGY0 326 aa17.35■□□□□ 0.37
POLR2J3-220ENST00000613744 SGK494Q96LW2 274 aa17.35■□□□□ 0.37
POLR2J3-220ENST00000613744 ATP6V0BQ99437 205 aa17.35■□□□□ 0.37
POLR2J3-220ENST00000613744 TRGV9Q99603 122 aa17.35■□□□□ 0.37
POLR2J3-220ENST00000613744 RNF7Q9UBF6 113 aa17.35■□□□□ 0.37
POLR2J3-220ENST00000613744 INSIG2Q9Y5U4 225 aa17.35■□□□□ 0.37
POLR2J3-220ENST00000613744 TMEM167AQ8TBQ9 72 aa17.35■□□□□ 0.37
POLR2J3-220ENST00000613744 U3KQK5 164 aa17.35■□□□□ 0.37
POLR2J3-220ENST00000613744 UNC79Q9P2D8 2635 aa17.35■□□□□ 0.37
POLR2J3-220ENST00000613744 DYSFO75923 2080 aa17.35■□□□□ 0.37
POLR2J3-220ENST00000613744 PPIAL4EA0A075B759 164 aa17.34■□□□□ 0.37
POLR2J3-220ENST00000613744 TEX48A0A1B0GUV7 120 aa17.34■□□□□ 0.37
POLR2J3-220ENST00000613744 PPIAL4FP0DN26 164 aa17.34■□□□□ 0.37
POLR2J3-220ENST00000613744 RPL24P83731 157 aaKnown RBP17.34■□□□□ 0.37
POLR2J3-220ENST00000613744 OR8A1Q8NGG7 326 aa17.34■□□□□ 0.37
POLR2J3-220ENST00000613744 RAB37Q96AX2 223 aa17.34■□□□□ 0.37
POLR2J3-220ENST00000613744 TIMM8BQ9Y5J9 83 aaPredicted RBP17.34■□□□□ 0.37
POLR2J3-220ENST00000613744 ZNF833PQ6ZTB9 187 aa17.33■□□□□ 0.37
POLR2J3-220ENST00000613744 DEFB108BQ8NET1 73 aa17.33■□□□□ 0.37
POLR2J3-220ENST00000613744 LHBP01229 141 aa17.33■□□□□ 0.36
POLR2J3-220ENST00000613744 VGLL1Q99990 258 aa17.33■□□□□ 0.36
POLR2J3-220ENST00000613744 SPATA25Q9BR10 227 aa17.33■□□□□ 0.36
POLR2J3-220ENST00000613744 NAA38Q9BRA0 125 aaKnown RBP17.33■□□□□ 0.36
POLR2J3-220ENST00000613744 BAHCC1Q9P281 2608 aa17.33■□□□□ 0.36
POLR2J3-220ENST00000613744 ASH1LQ9NR48 2969 aaKnown RBP17.32■□□□□ 0.36
POLR2J3-220ENST00000613744 F8W1H4 67 aa17.32■□□□□ 0.36
POLR2J3-220ENST00000613744 CRYGCP07315 174 aa17.32■□□□□ 0.36
POLR2J3-220ENST00000613744 HARBI1Q96MB7 349 aa17.32■□□□□ 0.36
POLR2J3-220ENST00000613744 RPUSD1Q9UJJ7 312 aaKnown RBP17.32■□□□□ 0.36
POLR2J3-220ENST00000613744 ITPR2Q14571 2701 aa17.32■□□□□ 0.36
POLR2J3-220ENST00000613744 IGHV4-39P01824 125 aa17.32■□□□□ 0.36
POLR2J3-220ENST00000613744 HBDP02042 147 aa17.32■□□□□ 0.36
POLR2J3-220ENST00000613744 ZNF414Q96IQ9 312 aa17.32■□□□□ 0.36
POLR2J3-220ENST00000613744 ARMS2P0C7Q2 107 aa17.31■□□□□ 0.36
POLR2J3-220ENST00000613744 CACNG7P62955 275 aa17.31■□□□□ 0.36
POLR2J3-220ENST00000613744 MEF2CQ06413 473 aaPredicted RBP17.31■□□□□ 0.36
POLR2J3-220ENST00000613744 PVRIGQ6DKI7 326 aa17.31■□□□□ 0.36
POLR2J3-220ENST00000613744 TMEM14CQ9P0S9 112 aa17.31■□□□□ 0.36
POLR2J3-220ENST00000613744 GAGE12HA6NDE8 117 aa17.3■□□□□ 0.36
POLR2J3-220ENST00000613744 ORM2P19652 201 aa17.3■□□□□ 0.36
POLR2J3-220ENST00000613744 ATP5J2P56134 94 aa17.3■□□□□ 0.36
POLR2J3-220ENST00000613744 IGLV2-11P01706 119 aa17.3■□□□□ 0.36
POLR2J3-220ENST00000613744 IFI27P40305 119 aaPredicted RBP17.3■□□□□ 0.36
POLR2J3-220ENST00000613744 EFNA4P52798 201 aa17.3■□□□□ 0.36
POLR2J3-220ENST00000613744 WT1-ASQ06250 92 aa17.3■□□□□ 0.36
POLR2J3-220ENST00000613744 C8orf46Q8TAG6 207 aa17.3■□□□□ 0.36
POLR2J3-220ENST00000613744 DSCAML1Q8TD84 2053 aa17.3■□□□□ 0.36
POLR2J3-220ENST00000613744 ZNF207O43670 478 aaKnown RBP17.29■□□□□ 0.36
POLR2J3-220ENST00000613744 CIARTQ8N365 385 aaPredicted RBP17.29■□□□□ 0.36
POLR2J3-220ENST00000613744 GTSF1LQ9H1H1 148 aa17.29■□□□□ 0.36
POLR2J3-220ENST00000613744 ANKRD17O75179 2603 aaKnown RBP17.29■□□□□ 0.36
POLR2J3-220ENST00000613744 MAP1AP78559 2803 aaPredicted RBP17.29■□□□□ 0.36
POLR2J3-220ENST00000613744 TANC2Q9HCD6 1990 aa17.29■□□□□ 0.36
POLR2J3-220ENST00000613744 TMEM178BH3BS89 294 aa17.28■□□□□ 0.36
POLR2J3-220ENST00000613744 TCTEX1D4Q5JR98 221 aa17.28■□□□□ 0.36
POLR2J3-220ENST00000613744 SRSF12Q8WXF0 261 aaKnown RBP17.28■□□□□ 0.36
POLR2J3-220ENST00000613744 IFI27L1Q96BM0 104 aa17.28■□□□□ 0.36
POLR2J3-220ENST00000613744 TMEM75Q8N9X5 138 aa17.28■□□□□ 0.36
POLR2J3-220ENST00000613744 CGB1A6NKQ9 187 aa17.27■□□□□ 0.36
POLR2J3-220ENST00000613744 HLA-DRB4P13762 266 aa17.27■□□□□ 0.36
POLR2J3-220ENST00000613744 PAX8Q06710 450 aa17.27■□□□□ 0.36
POLR2J3-220ENST00000613744 SMAGPQ0VAQ4 97 aa17.27■□□□□ 0.36
POLR2J3-220ENST00000613744 LINC01559Q495D7 138 aa17.27■□□□□ 0.36
POLR2J3-220ENST00000613744 HLA-DRB4X5D2U9 266 aa17.27■□□□□ 0.36
POLR2J3-220ENST00000613744 hADV38S2A0JD32 116 aa17.27■□□□□ 0.35
POLR2J3-220ENST00000613744 FLYWCH2Q96CP2 140 aaKnown RBP17.27■□□□□ 0.35
POLR2J3-220ENST00000613744 SPANXB1Q9NS25 103 aaPredicted RBP17.27■□□□□ 0.35
POLR2J3-220ENST00000613744 MRPL36Q9P0J6 103 aaKnown RBP17.27■□□□□ 0.35
POLR2J3-220ENST00000613744 PRNTQ86SH4 94 aa17.26■□□□□ 0.35
POLR2J3-220ENST00000613744 ORMDL3Q8N138 153 aa17.26■□□□□ 0.35
POLR2J3-220ENST00000613744 PRELID3AQ96N28 172 aa17.26■□□□□ 0.35
POLR2J3-220ENST00000613744 TSSC4Q9Y5U2 329 aaPredicted RBP17.26■□□□□ 0.35
POLR2J3-220ENST00000613744 FCGR2BP31994 310 aaPredicted RBP17.25■□□□□ 0.35
POLR2J3-220ENST00000613744 NMUP48645 174 aa17.25■□□□□ 0.35
POLR2J3-220ENST00000613744 DUX4L9Q6RFH8 374 aaPredicted RBP17.25■□□□□ 0.35
POLR2J3-220ENST00000613744 PCP2Q8IVA1 136 aa17.25■□□□□ 0.35
POLR2J3-220ENST00000613744 OR4C13Q8NGP0 309 aa17.25■□□□□ 0.35
POLR2J3-220ENST00000613744 PHLDA1Q8WV24 401 aaPredicted RBP17.25■□□□□ 0.35
POLR2J3-220ENST00000613744 TNCP24821 2201 aa17.25■□□□□ 0.35
POLR2J3-220ENST00000613744 E7EUB6 86 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms