RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 I3L3M4 83 aa14.02□□□□□ -0.16
HMGXB3-206ENST00000613459 BRD3OSQ6XYD6 125 aa14.02□□□□□ -0.16
HMGXB3-206ENST00000613459 PMVKQ15126 192 aa14.02□□□□□ -0.17
HMGXB3-206ENST00000613459 KLHDC3Q9BQ90 382 aa14.02□□□□□ -0.17
HMGXB3-206ENST00000613459 MCRIP2Q9BUT9 160 aaKnown RBP14.02□□□□□ -0.17
HMGXB3-206ENST00000613459 IGLC2P0DOY2 106 aa14.02□□□□□ -0.17
HMGXB3-206ENST00000613459 IGLC3P0DOY3 106 aa14.02□□□□□ -0.17
HMGXB3-206ENST00000613459 IGHV1-24A0A0C4DH33 117 aa14.01□□□□□ -0.17
HMGXB3-206ENST00000613459 IGKV1-16P04430 117 aa14.01□□□□□ -0.17
HMGXB3-206ENST00000613459 TP53TG1Q9Y2A0 90 aa14.01□□□□□ -0.17
HMGXB3-206ENST00000613459 A0A087WWL8 130 aa14.01□□□□□ -0.17
HMGXB3-206ENST00000613459 TRAV13-1A0A0B4J241 112 aa14.01□□□□□ -0.17
HMGXB3-206ENST00000613459 E7EQL1 145 aa14.01□□□□□ -0.17
HMGXB3-206ENST00000613459 TCF15Q12870 199 aa14.01□□□□□ -0.17
HMGXB3-206ENST00000613459 RBMY1FQ15415 496 aaKnown RBP14.01□□□□□ -0.17
HMGXB3-206ENST00000613459 SMIM27A0A1W2PRY6 76 aa14.01□□□□□ -0.17
HMGXB3-206ENST00000613459 OVOL3O00110 214 aa14.01□□□□□ -0.17
HMGXB3-206ENST00000613459 RPL35AP18077 110 aaKnown RBP14.01□□□□□ -0.17
HMGXB3-206ENST00000613459 GNLYP22749 145 aa14.01□□□□□ -0.17
HMGXB3-206ENST00000613459 TAL2Q16559 108 aa14.01□□□□□ -0.17
HMGXB3-206ENST00000613459 RNF144BQ7Z419 303 aa14.01□□□□□ -0.17
HMGXB3-206ENST00000613459 ANK1P16157 1881 aa14.01□□□□□ -0.17
HMGXB3-206ENST00000613459 COX8AP10176 69 aa14.01□□□□□ -0.17
HMGXB3-206ENST00000613459 SLAQ13239 276 aa14.01□□□□□ -0.17
HMGXB3-206ENST00000613459 LGALS9BQ3B8N2 356 aa14.01□□□□□ -0.17
HMGXB3-206ENST00000613459 LGALS9CQ6DKI2 356 aa14.01□□□□□ -0.17
HMGXB3-206ENST00000613459 SELENOKQ9Y6D0 94 aa14.01□□□□□ -0.17
HMGXB3-206ENST00000613459 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.01□□□□□ -0.17
HMGXB3-206ENST00000613459 ZNF625Q96I27 306 aaPredicted RBP14.01□□□□□ -0.17
HMGXB3-206ENST00000613459 RTTNQ86VV8 2226 aa14□□□□□ -0.17
HMGXB3-206ENST00000613459 IGKV1-6A0A0C4DH72 117 aa14□□□□□ -0.17
HMGXB3-206ENST00000613459 C11orf44Q8N8P7 122 aa14□□□□□ -0.17
HMGXB3-206ENST00000613459 NDUFA4O00483 81 aa14□□□□□ -0.17
HMGXB3-206ENST00000613459 IGFL4Q6B9Z1 124 aa14□□□□□ -0.17
HMGXB3-206ENST00000613459 TSSC4Q9Y5U2 329 aaPredicted RBP14□□□□□ -0.17
HMGXB3-206ENST00000613459 IGHV3-53P01767 116 aa14□□□□□ -0.17
HMGXB3-206ENST00000613459 MSMBP08118 114 aa14□□□□□ -0.17
HMGXB3-206ENST00000613459 HS3ST6Q96QI5 342 aa14□□□□□ -0.17
HMGXB3-206ENST00000613459 C2orf66Q6UXQ4 117 aa13.99□□□□□ -0.17
HMGXB3-206ENST00000613459 SPANXCQ9NY87 97 aa13.99□□□□□ -0.17
HMGXB3-206ENST00000613459 SCN5AQ14524 2016 aa13.99□□□□□ -0.17
HMGXB3-206ENST00000613459 TRBV25-1A0A075B6N4 114 aa13.99□□□□□ -0.17
HMGXB3-206ENST00000613459 LINC01619G3V211 115 aa13.99□□□□□ -0.17
HMGXB3-206ENST00000613459 DEFB104AQ8WTQ1 72 aa13.99□□□□□ -0.17
HMGXB3-206ENST00000613459 ESPL1Q14674 2120 aa13.99□□□□□ -0.17
HMGXB3-206ENST00000613459 PSCAO43653 123 aa13.99□□□□□ -0.17
HMGXB3-206ENST00000613459 IFITM1P13164 125 aa13.99□□□□□ -0.17
HMGXB3-206ENST00000613459 TMEM213A2RRL7 107 aa13.99□□□□□ -0.17
HMGXB3-206ENST00000613459 BPESC1Q9GZL8 116 aa13.99□□□□□ -0.17
HMGXB3-206ENST00000613459 GVINP1Q7Z2Y8 2422 aa13.99□□□□□ -0.17
HMGXB3-206ENST00000613459 J3QLI3 93 aa13.99□□□□□ -0.17
HMGXB3-206ENST00000613459 H3BRN7 92 aa13.98□□□□□ -0.17
HMGXB3-206ENST00000613459 TEX36Q5VZQ5 186 aa13.98□□□□□ -0.17
HMGXB3-206ENST00000613459 C5orf24Q7Z6I8 188 aa13.98□□□□□ -0.17
HMGXB3-206ENST00000613459 FREM3P0C091 2139 aa13.98□□□□□ -0.17
HMGXB3-206ENST00000613459 IGHV1-69DA0A0B4J2H0 117 aa13.98□□□□□ -0.17
HMGXB3-206ENST00000613459 IGHV1-69P01742 117 aa13.98□□□□□ -0.17
HMGXB3-206ENST00000613459 CFHR2P36980 270 aa13.98□□□□□ -0.17
HMGXB3-206ENST00000613459 DEFB131AP59861 70 aa13.98□□□□□ -0.17
HMGXB3-206ENST00000613459 IGFL3Q6UXB1 125 aa13.98□□□□□ -0.17
HMGXB3-206ENST00000613459 ARHGEF17Q96PE2 2063 aaPredicted RBP13.98□□□□□ -0.17
HMGXB3-206ENST00000613459 LINC00479Q96M42 142 aa13.98□□□□□ -0.17
HMGXB3-206ENST00000613459 ZNF581Q9P0T4 197 aa13.98□□□□□ -0.17
HMGXB3-206ENST00000613459 SIP14410 1827 aa13.98□□□□□ -0.17
HMGXB3-206ENST00000613459 Q6ZWC4 215 aa13.98□□□□□ -0.17
HMGXB3-206ENST00000613459 C8orf49Q96NF6 230 aa13.98□□□□□ -0.17
HMGXB3-206ENST00000613459 SIVA1O15304 175 aa13.97□□□□□ -0.17
HMGXB3-206ENST00000613459 ATP6V0E1O15342 81 aa13.97□□□□□ -0.17
HMGXB3-206ENST00000613459 IGHV1OR15-1A0A075B7D0 117 aa13.97□□□□□ -0.17
HMGXB3-206ENST00000613459 V9GYV3 84 aa13.97□□□□□ -0.17
HMGXB3-206ENST00000613459 K7EP13 123 aa13.97□□□□□ -0.17
HMGXB3-206ENST00000613459 CEND1Q8N111 149 aa13.97□□□□□ -0.17
HMGXB3-206ENST00000613459 A0A1B0GUS0 222 aa13.97□□□□□ -0.17
HMGXB3-206ENST00000613459 SYNJ2BPP57105 145 aa13.97□□□□□ -0.17
HMGXB3-206ENST00000613459 CEP250Q9BV73 2442 aa13.97□□□□□ -0.17
HMGXB3-206ENST00000613459 CACNA1DQ01668 2161 aa13.97□□□□□ -0.17
HMGXB3-206ENST00000613459 C11orf52Q96A22 123 aa13.96□□□□□ -0.17
HMGXB3-206ENST00000613459 UBE2E2Q96LR5 201 aa13.96□□□□□ -0.17
HMGXB3-206ENST00000613459 MSRB2Q9Y3D2 182 aa13.96□□□□□ -0.17
HMGXB3-206ENST00000613459 IGHV2-70DA0A0C4DH43 119 aa13.96□□□□□ -0.17
HMGXB3-206ENST00000613459 A0A1W2PPM0 123 aa13.96□□□□□ -0.17
HMGXB3-206ENST00000613459 PYGO2Q9BRQ0 406 aa13.96□□□□□ -0.17
HMGXB3-206ENST00000613459 UNQ6494/PRO21346Q6UXR6 183 aa13.96□□□□□ -0.18
HMGXB3-206ENST00000613459 THAP8Q8NA92 274 aa13.96□□□□□ -0.18
HMGXB3-206ENST00000613459 UBL5Q9BZL1 73 aa13.96□□□□□ -0.18
HMGXB3-206ENST00000613459 PAX9P55771 341 aa13.96□□□□□ -0.18
HMGXB3-206ENST00000613459 H3BUA1 57 aa13.95□□□□□ -0.18
HMGXB3-206ENST00000613459 TRACP01848 142 aa13.95□□□□□ -0.18
HMGXB3-206ENST00000613459 RPL32P62910 135 aaKnown RBP13.95□□□□□ -0.18
HMGXB3-206ENST00000613459 MLANAQ16655 118 aa13.95□□□□□ -0.18
HMGXB3-206ENST00000613459 MRPL51Q4U2R6 128 aaKnown RBP13.95□□□□□ -0.18
HMGXB3-206ENST00000613459 VOPP1Q96AW1 172 aa13.95□□□□□ -0.18
HMGXB3-206ENST00000613459 ZSWIM8A7E2V4 1837 aa13.95□□□□□ -0.18
HMGXB3-206ENST00000613459 TRPM7Q96QT4 1865 aa13.95□□□□□ -0.18
HMGXB3-206ENST00000613459 K7EM74 188 aa13.95□□□□□ -0.18
HMGXB3-206ENST00000613459 CEACAM8P31997 349 aaPredicted RBP13.94□□□□□ -0.18
HMGXB3-206ENST00000613459 PRR25Q96S07 402 aa13.94□□□□□ -0.18
HMGXB3-206ENST00000613459 C8orf31Q8N9H6 132 aa13.94□□□□□ -0.18
HMGXB3-206ENST00000613459 C1orf147Q96MC9 270 aaPredicted RBP13.94□□□□□ -0.18
HMGXB3-206ENST00000613459 ATP6V0BQ99437 205 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms