RNA–Protein interactions for RNA: ENST00000610470.4

PRKN-208, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene PRKN, Length 531 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-208ENST00000610470 C16orf74Q96GX8 76 aa12.28□□□□□ -0.44
PRKN-208ENST00000610470 IGSF23A1L1A6 192 aa12.27□□□□□ -0.45
PRKN-208ENST00000610470 H3BTX0 84 aa12.27□□□□□ -0.45
PRKN-208ENST00000610470 M0R2N4 97 aa12.27□□□□□ -0.45
PRKN-208ENST00000610470 SLC17A3O00476 420 aa12.27□□□□□ -0.45
PRKN-208ENST00000610470 DEFB130BP0DP73 79 aa12.27□□□□□ -0.45
PRKN-208ENST00000610470 DEFB130AP0DP74 79 aa12.27□□□□□ -0.45
PRKN-208ENST00000610470 PRB4P10163 310 aaPredicted RBP12.27□□□□□ -0.45
PRKN-208ENST00000610470 ATP6V1FQ16864 119 aa12.27□□□□□ -0.45
PRKN-208ENST00000610470 LGALS9BQ3B8N2 356 aa12.27□□□□□ -0.45
PRKN-208ENST00000610470 C20orf144Q9BQM9 153 aa12.27□□□□□ -0.45
PRKN-208ENST00000610470 SLC39A9Q9NUM3 307 aa12.27□□□□□ -0.45
PRKN-208ENST00000610470 PLAC8L1A1L4L8 177 aa12.26□□□□□ -0.45
PRKN-208ENST00000610470 H3BQ15 152 aa12.26□□□□□ -0.45
PRKN-208ENST00000610470 H7BYZ3 331 aa12.26□□□□□ -0.45
PRKN-208ENST00000610470 HTN1P15515 57 aa12.26□□□□□ -0.45
PRKN-208ENST00000610470 ZNF493Q6ZR52 646 aa12.26□□□□□ -0.45
PRKN-208ENST00000610470 CHAC2Q8WUX2 184 aa12.26□□□□□ -0.45
PRKN-208ENST00000610470 SAT2Q96F10 170 aaPredicted RBP12.26□□□□□ -0.45
PRKN-208ENST00000610470 TRAV5A0A0B4J249 113 aa12.25□□□□□ -0.45
PRKN-208ENST00000610470 PRAC2D3DTV9 90 aa12.25□□□□□ -0.45
PRKN-208ENST00000610470 MPDU1O75352 247 aa12.25□□□□□ -0.45
PRKN-208ENST00000610470 SIX6O95475 246 aa12.25□□□□□ -0.45
PRKN-208ENST00000610470 FGF7P21781 194 aa12.25□□□□□ -0.45
PRKN-208ENST00000610470 TMEM263Q8WUH6 116 aaKnown RBP12.25□□□□□ -0.45
PRKN-208ENST00000610470 TIMM8BQ9Y5J9 83 aaPredicted RBP12.25□□□□□ -0.45
PRKN-208ENST00000610470 HERC2O95714 4834 aa12.25□□□□□ -0.45
PRKN-208ENST00000610470 CBY3A6NI87 242 aa12.24□□□□□ -0.45
PRKN-208ENST00000610470 ZNF253O75346 499 aa12.24□□□□□ -0.45
PRKN-208ENST00000610470 ATP5G1P05496 136 aa12.24□□□□□ -0.45
PRKN-208ENST00000610470 ATP5G3P48201 142 aa12.24□□□□□ -0.45
PRKN-208ENST00000610470 FCN2Q15485 313 aa12.24□□□□□ -0.45
PRKN-208ENST00000610470 IGLV2-18A0A075B6J9 118 aa12.23□□□□□ -0.45
PRKN-208ENST00000610470 F5H768 121 aa12.23□□□□□ -0.45
PRKN-208ENST00000610470 PTTG1O95997 202 aa12.23□□□□□ -0.45
PRKN-208ENST00000610470 RLN2P04090 185 aa12.23□□□□□ -0.45
PRKN-208ENST00000610470 LEPP41159 167 aa12.23□□□□□ -0.45
PRKN-208ENST00000610470 FAM3BP58499 235 aaPredicted RBP12.23□□□□□ -0.45
PRKN-208ENST00000610470 CCDC28AQ8IWP9 274 aa12.23□□□□□ -0.45
PRKN-208ENST00000610470 RNASE8Q8TDE3 154 aaKnown RBP12.23□□□□□ -0.45
PRKN-208ENST00000610470 ODF3Q96PU9 254 aa12.23□□□□□ -0.45
PRKN-208ENST00000610470 ZNF586Q9NXT0 402 aa12.23□□□□□ -0.45
PRKN-208ENST00000610470 TMEM14CQ9P0S9 112 aa12.23□□□□□ -0.45
PRKN-208ENST00000610470 PRSS29PA6NIE9 313 aa12.22□□□□□ -0.45
PRKN-208ENST00000610470 SSNA1O43805 119 aa12.22□□□□□ -0.45
PRKN-208ENST00000610470 KIR3DS1Q14943 382 aa12.22□□□□□ -0.45
PRKN-208ENST00000610470 GFI1BQ5VTD9 330 aa12.22□□□□□ -0.45
PRKN-208ENST00000610470 MRPL53Q96EL3 112 aaKnown RBP12.22□□□□□ -0.45
PRKN-208ENST00000610470 ATG101Q9BSB4 218 aa12.22□□□□□ -0.45
PRKN-208ENST00000610470 NPCDR1Q9BY65 106 aa12.22□□□□□ -0.45
PRKN-208ENST00000610470 PARD6GQ9BYG4 376 aaPredicted RBP12.22□□□□□ -0.45
PRKN-208ENST00000610470 SLC25A31Q9H0C2 315 aa12.22□□□□□ -0.45
PRKN-208ENST00000610470 NOP10Q9NPE3 64 aaKnown RBP12.22□□□□□ -0.45
PRKN-208ENST00000610470 TRBV19A0A075B6N1 114 aa12.21□□□□□ -0.45
PRKN-208ENST00000610470 E5RGE8 158 aa12.21□□□□□ -0.45
PRKN-208ENST00000610470 NPIPB6E9PJ23 425 aa12.21□□□□□ -0.45
PRKN-208ENST00000610470 RTL8CO15255 209 aa12.21□□□□□ -0.45
PRKN-208ENST00000610470 HIST1H1EP10412 219 aaKnown RBP12.21□□□□□ -0.45
PRKN-208ENST00000610470 Q6ZR54 194 aa12.21□□□□□ -0.45
PRKN-208ENST00000610470 NMES1Q9C002 83 aa12.21□□□□□ -0.45
PRKN-208ENST00000610470 PRELID1Q9Y255 219 aa12.21□□□□□ -0.45
PRKN-208ENST00000610470 CT45A10P0DMU9 189 aa12.2□□□□□ -0.46
PRKN-208ENST00000610470 NHLH2Q02577 135 aa12.2□□□□□ -0.46
PRKN-208ENST00000610470 PDE6HQ13956 83 aa12.2□□□□□ -0.46
PRKN-208ENST00000610470 SOHLH1Q5JUK2 328 aa12.2□□□□□ -0.46
PRKN-208ENST00000610470 OR5C1Q8NGR4 320 aa12.2□□□□□ -0.46
PRKN-208ENST00000610470 TIMM9Q9Y5J7 89 aa12.2□□□□□ -0.46
PRKN-208ENST00000610470 A0A1B0GVY2 172 aa12.19□□□□□ -0.46
PRKN-208ENST00000610470 J3KRW8 73 aa12.19□□□□□ -0.46
PRKN-208ENST00000610470 NUDT3O95989 172 aa12.19□□□□□ -0.46
PRKN-208ENST00000610470 H2BFSP57053 126 aa12.19□□□□□ -0.46
PRKN-208ENST00000610470 CYCSP99999 105 aaKnown RBP12.19□□□□□ -0.46
PRKN-208ENST00000610470 ALG5Q9Y673 324 aa12.19□□□□□ -0.46
PRKN-208ENST00000610470 TRAV12-3A0A0B4J271 114 aa12.18□□□□□ -0.46
PRKN-208ENST00000610470 SNURFLB1AK76 121 aa12.18□□□□□ -0.46
PRKN-208ENST00000610470 PYYP10082 97 aa12.18□□□□□ -0.46
PRKN-208ENST00000610470 LRRC37A5PQ49AS3 106 aa12.18□□□□□ -0.46
PRKN-208ENST00000610470 THAP6Q8TBB0 222 aa12.18□□□□□ -0.46
PRKN-208ENST00000610470 PYGO2Q9BRQ0 406 aa12.18□□□□□ -0.46
PRKN-208ENST00000610470 AAMDCQ9H7C9 122 aa12.18□□□□□ -0.46
PRKN-208ENST00000610470 KCNIP2Q9NS61 270 aa12.18□□□□□ -0.46
PRKN-208ENST00000610470 OR5AC2Q9NZP5 309 aa12.18□□□□□ -0.46
PRKN-208ENST00000610470 PKHD1P08F94 4074 aa12.18□□□□□ -0.46
PRKN-208ENST00000610470 M0R3E3 92 aa12.17□□□□□ -0.46
PRKN-208ENST00000610470 NDUFB4O95168 129 aa12.17□□□□□ -0.46
PRKN-208ENST00000610470 SLC25A5P05141 298 aaKnown RBP12.17□□□□□ -0.46
PRKN-208ENST00000610470 GCSAMLQ5JQS6 135 aa12.17□□□□□ -0.46
PRKN-208ENST00000610470 BLNKQ8WV28 456 aa12.17□□□□□ -0.46
PRKN-208ENST00000610470 LINC00477Q96M19 166 aa12.17□□□□□ -0.46
PRKN-208ENST00000610470 NACAE9PAV3 2078 aa12.16□□□□□ -0.46
PRKN-208ENST00000610470 CCL18P55774 89 aa12.16□□□□□ -0.46
PRKN-208ENST00000610470 CLINT1Q14677 625 aa12.16□□□□□ -0.46
PRKN-208ENST00000610470 C1orf134Q5TEV5 83 aa12.16□□□□□ -0.46
PRKN-208ENST00000610470 LINC00612Q8N6U2 182 aa12.16□□□□□ -0.46
PRKN-208ENST00000610470 RNF141Q8WVD5 230 aa12.16□□□□□ -0.46
PRKN-208ENST00000610470 SLC25A2Q9BXI2 301 aa12.16□□□□□ -0.46
PRKN-208ENST00000610470 C7orf71A4D174 169 aa12.15□□□□□ -0.46
PRKN-208ENST00000610470 C17orf112F2Z3M2 114 aa12.15□□□□□ -0.46
PRKN-208ENST00000610470 H0YIZ8 118 aa12.15□□□□□ -0.46
PRKN-208ENST00000610470 ERCC8Q13216 396 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms