RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 PAXXQ9BUH6 204 aa9.7□□□□□ -0.86
CTSA-213ENST00000606782 ZNF705EA8MWA4 302 aaPredicted RBP9.69□□□□□ -0.86
CTSA-213ENST00000606782 ISLRO14498 428 aa9.69□□□□□ -0.86
CTSA-213ENST00000606782 EIF3GO75821 320 aaKnown RBP eCLIP9.69□□□□□ -0.86
CTSA-213ENST00000606782 NBEAP1P0C6P0 100 aa9.69□□□□□ -0.86
CTSA-213ENST00000606782 ZNF688P0C7X2 276 aa9.69□□□□□ -0.86
CTSA-213ENST00000606782 PYYP10082 97 aa9.69□□□□□ -0.86
CTSA-213ENST00000606782 RAB5CP51148 216 aa9.69□□□□□ -0.86
CTSA-213ENST00000606782 NANOS2P60321 138 aaKnown RBP9.69□□□□□ -0.86
CTSA-213ENST00000606782 KMT2AQ03164 3969 aa9.69□□□□□ -0.86
CTSA-213ENST00000606782 KHDC3LQ587J8 217 aa9.69□□□□□ -0.86
CTSA-213ENST00000606782 LGALS9CQ6DKI2 356 aa9.69□□□□□ -0.86
CTSA-213ENST00000606782 DPPA3Q6W0C5 159 aa9.69□□□□□ -0.86
CTSA-213ENST00000606782 PQLC2Q6ZP29 291 aa9.69□□□□□ -0.86
CTSA-213ENST00000606782 SSX7Q7RTT5 188 aa9.69□□□□□ -0.86
CTSA-213ENST00000606782 Q8NAQ8 132 aa9.69□□□□□ -0.86
CTSA-213ENST00000606782 SUN5Q8TC36 379 aa9.69□□□□□ -0.86
CTSA-213ENST00000606782 MBD3L1Q8WWY6 194 aa9.69□□□□□ -0.86
CTSA-213ENST00000606782 FXYD5Q96DB9 178 aa9.69□□□□□ -0.86
CTSA-213ENST00000606782 PHYHIPLQ96FC7 376 aa9.69□□□□□ -0.86
CTSA-213ENST00000606782 TRBV19A0A075B6N1 114 aa9.68□□□□□ -0.86
CTSA-213ENST00000606782 TRAV8-2A0A0B4J237 113 aa9.68□□□□□ -0.86
CTSA-213ENST00000606782 CTXND1A0A1B0GTU2 59 aa9.68□□□□□ -0.86
CTSA-213ENST00000606782 HMGB3O15347 200 aaKnown RBP9.68□□□□□ -0.86
CTSA-213ENST00000606782 ZNF253O75346 499 aa9.68□□□□□ -0.86
CTSA-213ENST00000606782 NDUFB4O95168 129 aa9.68□□□□□ -0.86
CTSA-213ENST00000606782 SNRPCP09234 159 aaKnown RBP9.68□□□□□ -0.86
CTSA-213ENST00000606782 ID1P41134 155 aa9.68□□□□□ -0.86
CTSA-213ENST00000606782 FHITP49789 147 aa9.68□□□□□ -0.86
CTSA-213ENST00000606782 SULT1A2P50226 295 aa9.68□□□□□ -0.86
CTSA-213ENST00000606782 CSNK1G2-AS1Q8NCQ2 148 aa9.68□□□□□ -0.86
CTSA-213ENST00000606782 C16orf92Q96LL3 132 aa9.68□□□□□ -0.86
CTSA-213ENST00000606782 ZNF331Q9NQX6 463 aaPredicted RBP9.68□□□□□ -0.86
CTSA-213ENST00000606782 KNCNA6PVL3 124 aa9.67□□□□□ -0.86
CTSA-213ENST00000606782 OR7C2O60412 319 aa9.67□□□□□ -0.86
CTSA-213ENST00000606782 RBMY1A1P0DJD3 496 aaKnown RBP9.67□□□□□ -0.86
CTSA-213ENST00000606782 RBMY1CP0DJD4 496 aa9.67□□□□□ -0.86
CTSA-213ENST00000606782 MIFP14174 115 aa9.67□□□□□ -0.86
CTSA-213ENST00000606782 PSMB3P49720 205 aa9.67□□□□□ -0.86
CTSA-213ENST00000606782 TCTAP57738 103 aa9.67□□□□□ -0.86
CTSA-213ENST00000606782 SNRPD3P62318 126 aaKnown RBP9.67□□□□□ -0.86
CTSA-213ENST00000606782 PDE6HQ13956 83 aa9.67□□□□□ -0.86
CTSA-213ENST00000606782 RBMY1FQ15415 496 aaKnown RBP9.67□□□□□ -0.86
CTSA-213ENST00000606782 LCN15Q6UWW0 184 aa9.67□□□□□ -0.86
CTSA-213ENST00000606782 H3BTX0 84 aa9.66□□□□□ -0.86
CTSA-213ENST00000606782 CXorf1O96002 111 aa9.66□□□□□ -0.86
CTSA-213ENST00000606782 OR10J4P0C629 311 aa9.66□□□□□ -0.86
CTSA-213ENST00000606782 ARL14EPLP0DKL9 152 aa9.66□□□□□ -0.86
CTSA-213ENST00000606782 PSG3Q16557 428 aa9.66□□□□□ -0.86
CTSA-213ENST00000606782 PSMG4Q5JS54 123 aa9.66□□□□□ -0.86
CTSA-213ENST00000606782 ACTL10Q5JWF8 245 aa9.66□□□□□ -0.86
CTSA-213ENST00000606782 LRRC20Q8TCA0 184 aa9.66□□□□□ -0.86
CTSA-213ENST00000606782 C20orf173Q96LM9 149 aa9.66□□□□□ -0.86
CTSA-213ENST00000606782 SLC50A1Q9BRV3 221 aa9.66□□□□□ -0.86
CTSA-213ENST00000606782 CLEC5AQ9NY25 188 aa9.66□□□□□ -0.86
CTSA-213ENST00000606782 X6R8D5 127 aa9.66□□□□□ -0.86
CTSA-213ENST00000606782 IGHV4-28A0A0C4DH34 117 aa9.65□□□□□ -0.86
CTSA-213ENST00000606782 C11orf94C9JXX5 98 aa9.65□□□□□ -0.86
CTSA-213ENST00000606782 H3BMM0 161 aa9.65□□□□□ -0.86
CTSA-213ENST00000606782 SLC17A3O00476 420 aa9.65□□□□□ -0.86
CTSA-213ENST00000606782 DEFB4AO15263 64 aa9.65□□□□□ -0.86
CTSA-213ENST00000606782 GCHFRP30047 84 aa9.65□□□□□ -0.86
CTSA-213ENST00000606782 PSG9Q00887 426 aa9.65□□□□□ -0.86
CTSA-213ENST00000606782 IGFL4Q6B9Z1 124 aa9.65□□□□□ -0.86
CTSA-213ENST00000606782 ALKAL2Q6UX46 152 aa9.65□□□□□ -0.86
CTSA-213ENST00000606782 LYPD1Q8N2G4 141 aa9.65□□□□□ -0.86
CTSA-213ENST00000606782 FAM213BQ8TBF2 198 aa9.65□□□□□ -0.86
CTSA-213ENST00000606782 BLNKQ8WV28 456 aa9.65□□□□□ -0.86
CTSA-213ENST00000606782 LINC00052Q96N35 136 aa9.65□□□□□ -0.86
CTSA-213ENST00000606782 H2AFB1P0C5Y9 115 aa9.64□□□□□ -0.87
CTSA-213ENST00000606782 HLA-DMBP28068 263 aa9.64□□□□□ -0.87
CTSA-213ENST00000606782 UBE2L3P68036 154 aaKnown RBP9.64□□□□□ -0.87
CTSA-213ENST00000606782 RNF182Q8N6D2 247 aa9.64□□□□□ -0.87
CTSA-213ENST00000606782 C2CD4CQ8TF44 421 aa9.64□□□□□ -0.87
CTSA-213ENST00000606782 SFT2D1Q8WV19 159 aa9.64□□□□□ -0.87
CTSA-213ENST00000606782 CLUHP3Q96NS8 147 aa9.64□□□□□ -0.87
CTSA-213ENST00000606782 C1QTNF4Q9BXJ3 329 aa9.64□□□□□ -0.87
CTSA-213ENST00000606782 TMEM167BQ9NRX6 74 aa9.64□□□□□ -0.87
CTSA-213ENST00000606782 TRAV1-1A0A0B4J248 108 aa9.63□□□□□ -0.87
CTSA-213ENST00000606782 MAP1LC3B2A6NCE7 125 aa9.63□□□□□ -0.87
CTSA-213ENST00000606782 HLA-DRB4P13762 266 aa9.63□□□□□ -0.87
CTSA-213ENST00000606782 FGF8P55075 233 aaPredicted RBP9.63□□□□□ -0.87
CTSA-213ENST00000606782 NUTF2P61970 127 aaKnown RBP9.63□□□□□ -0.87
CTSA-213ENST00000606782 RANP62826 216 aaKnown RBP9.63□□□□□ -0.87
CTSA-213ENST00000606782 FAM74A1Q5RGS3 127 aa9.63□□□□□ -0.87
CTSA-213ENST00000606782 TEX261Q6UWH6 196 aa9.63□□□□□ -0.87
CTSA-213ENST00000606782 MAP1LC3BQ9GZQ8 125 aa9.63□□□□□ -0.87
CTSA-213ENST00000606782 TMPRSS5Q9H3S3 457 aa9.63□□□□□ -0.87
CTSA-213ENST00000606782 HLA-DRB4X5D2U9 266 aa9.63□□□□□ -0.87
CTSA-213ENST00000606782 ZNF705FA8MVS1 300 aaPredicted RBP9.62□□□□□ -0.87
CTSA-213ENST00000606782 EXOC3-AS1Q8N2X6 119 aa9.62□□□□□ -0.87
CTSA-213ENST00000606782 MRPL53Q96EL3 112 aaKnown RBP9.62□□□□□ -0.87
CTSA-213ENST00000606782 SAV1Q9H4B6 383 aaPredicted RBP9.62□□□□□ -0.87
CTSA-213ENST00000606782 APLNQ9ULZ1 77 aa9.62□□□□□ -0.87
CTSA-213ENST00000606782 PRELID1Q9Y255 219 aa9.62□□□□□ -0.87
CTSA-213ENST00000606782 PGPA6NDG6 321 aa9.61□□□□□ -0.87
CTSA-213ENST00000606782 DEFB1P60022 68 aa9.61□□□□□ -0.87
CTSA-213ENST00000606782 CCL20P78556 96 aa9.61□□□□□ -0.87
CTSA-213ENST00000606782 ICAM4Q14773 271 aa9.61□□□□□ -0.87
CTSA-213ENST00000606782 ZNF705AQ6ZN79 300 aaPredicted RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms