RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 DOCK7Q96N67 2140 aa3.18□□□□□ -1.9
HMGB1P50-201ENST00000605814 TRGV9Q99603 122 aa3.18□□□□□ -1.9
HMGB1P50-201ENST00000605814 RASL11BQ9BPW5 248 aa3.18□□□□□ -1.9
HMGB1P50-201ENST00000605814 CNFNQ9BYD5 112 aa3.18□□□□□ -1.9
HMGB1P50-201ENST00000605814 DEFB126Q9BYW3 111 aa3.18□□□□□ -1.9
HMGB1P50-201ENST00000605814 FBXL15Q9H469 300 aa3.18□□□□□ -1.9
HMGB1P50-201ENST00000605814 LINC00574Q9H8X3 128 aa3.18□□□□□ -1.9
HMGB1P50-201ENST00000605814 ZNF71Q9NQZ8 489 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P50-201ENST00000605814 MED12Q93074 2177 aa3.18□□□□□ -1.9
HMGB1P50-201ENST00000605814 DSCAML1Q8TD84 2053 aa3.18□□□□□ -1.9
HMGB1P50-201ENST00000605814 FREM1Q5H8C1 2179 aa3.17□□□□□ -1.9
HMGB1P50-201ENST00000605814 IGKV1D-37A0A075B6S9 117 aa3.17□□□□□ -1.9
HMGB1P50-201ENST00000605814 IGHV3-15A0A0B4J1V0 119 aa3.17□□□□□ -1.9
HMGB1P50-201ENST00000605814 IGHV3-20A0A0C4DH32 117 aa3.17□□□□□ -1.9
HMGB1P50-201ENST00000605814 FAM240AA0A1B0GVK7 77 aa3.17□□□□□ -1.9
HMGB1P50-201ENST00000605814 F5H697 171 aa3.17□□□□□ -1.9
HMGB1P50-201ENST00000605814 CCDC179H3BU77 68 aa3.17□□□□□ -1.9
HMGB1P50-201ENST00000605814 K7EM74 188 aa3.17□□□□□ -1.9
HMGB1P50-201ENST00000605814 K7EMI3 77 aa3.17□□□□□ -1.9
HMGB1P50-201ENST00000605814 K7ERJ3 54 aa3.17□□□□□ -1.9
HMGB1P50-201ENST00000605814 M0R2P5 195 aa3.17□□□□□ -1.9
HMGB1P50-201ENST00000605814 TRIAP1O43715 76 aa3.17□□□□□ -1.9
HMGB1P50-201ENST00000605814 CRLF1O75462 422 aa3.17□□□□□ -1.9
HMGB1P50-201ENST00000605814 SNCGO76070 127 aa3.17□□□□□ -1.9
HMGB1P50-201ENST00000605814 CNIH1O95406 144 aa3.17□□□□□ -1.9
HMGB1P50-201ENST00000605814 ATP5G1P05496 136 aa3.17□□□□□ -1.9
HMGB1P50-201ENST00000605814 CSN3P07498 182 aa3.17□□□□□ -1.9
HMGB1P50-201ENST00000605814 CD7P09564 240 aa3.17□□□□□ -1.9
HMGB1P50-201ENST00000605814 ARMS2P0C7Q2 107 aa3.17□□□□□ -1.9
HMGB1P50-201ENST00000605814 PRTN3P24158 256 aa3.17□□□□□ -1.9
HMGB1P50-201ENST00000605814 CD24P25063 80 aa3.17□□□□□ -1.9
HMGB1P50-201ENST00000605814 PLNP26678 52 aa3.17□□□□□ -1.9
HMGB1P50-201ENST00000605814 ZNF137PP52743 207 aa3.17□□□□□ -1.9
HMGB1P50-201ENST00000605814 LOXL3P58215 753 aa3.17□□□□□ -1.9
HMGB1P50-201ENST00000605814 KRTAP10-7P60409 375 aaPredicted RBP3.17□□□□□ -1.9
HMGB1P50-201ENST00000605814 LOXL1Q08397 574 aaPredicted RBP3.17□□□□□ -1.9
HMGB1P50-201ENST00000605814 TBC1D28Q2M2D7 210 aa3.17□□□□□ -1.9
HMGB1P50-201ENST00000605814 MRPL51Q4U2R6 128 aaKnown RBP3.17□□□□□ -1.9
HMGB1P50-201ENST00000605814 MEIG1Q5JSS6 88 aa3.17□□□□□ -1.9
HMGB1P50-201ENST00000605814 UTF1Q5T230 341 aa3.17□□□□□ -1.9
HMGB1P50-201ENST00000605814 Q86TA4 180 aa3.17□□□□□ -1.9
HMGB1P50-201ENST00000605814 WDR86Q86TI4 376 aa3.17□□□□□ -1.9
HMGB1P50-201ENST00000605814 AMN1Q8IY45 258 aa3.17□□□□□ -1.9
HMGB1P50-201ENST00000605814 RBMXL3Q8N7X1 1067 aaKnown RBP3.17□□□□□ -1.9
HMGB1P50-201ENST00000605814 Q8N8P6 123 aa3.17□□□□□ -1.9
HMGB1P50-201ENST00000605814 TMEM116Q8NCL8 245 aa3.17□□□□□ -1.9
HMGB1P50-201ENST00000605814 SRSF12Q8WXF0 261 aaKnown RBP3.17□□□□□ -1.9
HMGB1P50-201ENST00000605814 IMMP1LQ96LU5 166 aa3.17□□□□□ -1.9
HMGB1P50-201ENST00000605814 LINC01587Q99440 93 aa3.17□□□□□ -1.9
HMGB1P50-201ENST00000605814 HIST1H4GQ99525 98 aa3.17□□□□□ -1.9
HMGB1P50-201ENST00000605814 PLA2G2FQ9BZM2 168 aa3.17□□□□□ -1.9
HMGB1P50-201ENST00000605814 NDUFA4L2Q9NRX3 87 aa3.17□□□□□ -1.9
HMGB1P50-201ENST00000605814 CSDC2Q9Y534 153 aaKnown RBP3.17□□□□□ -1.9
HMGB1P50-201ENST00000605814 F11RQ9Y624 299 aaKnown RBP3.17□□□□□ -1.9
HMGB1P50-201ENST00000605814 SELENOKQ9Y6D0 94 aa3.17□□□□□ -1.9
HMGB1P50-201ENST00000605814 KNTC1P50748 2209 aa3.16□□□□□ -1.9
HMGB1P50-201ENST00000605814 IGLV2-18A0A075B6J9 118 aa3.16□□□□□ -1.9
HMGB1P50-201ENST00000605814 IGHV1OR21-1A0A087WYE8 117 aa3.16□□□□□ -1.9
HMGB1P50-201ENST00000605814 IGHV1-45A0A0A0MS14 117 aa3.16□□□□□ -1.9
HMGB1P50-201ENST00000605814 TRBV7-7A0A0K0K1E9 115 aa3.16□□□□□ -1.9
HMGB1P50-201ENST00000605814 A0A1W2PPC4 97 aa3.16□□□□□ -1.9
HMGB1P50-201ENST00000605814 A0A1W2PR77 199 aa3.16□□□□□ -1.9
HMGB1P50-201ENST00000605814 SMIM9A6NGZ8 99 aa3.16□□□□□ -1.9
HMGB1P50-201ENST00000605814 LINC01549A6NIU2 74 aa3.16□□□□□ -1.9
HMGB1P50-201ENST00000605814 D6R8Y8 96 aa3.16□□□□□ -1.9
HMGB1P50-201ENST00000605814 LMO7DNF2Z398 122 aa3.16□□□□□ -1.9
HMGB1P50-201ENST00000605814 H7C1H1 209 aa3.16□□□□□ -1.9
HMGB1P50-201ENST00000605814 MRPL33O75394 65 aaKnown RBP3.16□□□□□ -1.9
HMGB1P50-201ENST00000605814 CEACAM4O75871 244 aa3.16□□□□□ -1.9
HMGB1P50-201ENST00000605814 DUSP14O95147 198 aaKnown RBP3.16□□□□□ -1.9
HMGB1P50-201ENST00000605814 PRSS1P07477 247 aa3.16□□□□□ -1.9
HMGB1P50-201ENST00000605814 P0DMU3 169 aa3.16□□□□□ -1.9
HMGB1P50-201ENST00000605814 FAM231AP0DMU4 169 aa3.16□□□□□ -1.9
HMGB1P50-201ENST00000605814 FAM231CP0DMU5 169 aa3.16□□□□□ -1.9
HMGB1P50-201ENST00000605814 PYYP10082 97 aa3.16□□□□□ -1.9
HMGB1P50-201ENST00000605814 GP9P14770 177 aa3.16□□□□□ -1.9
HMGB1P50-201ENST00000605814 LINC00205P59089 165 aa3.16□□□□□ -1.9
HMGB1P50-201ENST00000605814 CFHR1Q03591 330 aa3.16□□□□□ -1.9
HMGB1P50-201ENST00000605814 MZT1Q08AG7 82 aa3.16□□□□□ -1.9
HMGB1P50-201ENST00000605814 C1orf61Q13536 156 aa3.16□□□□□ -1.9
HMGB1P50-201ENST00000605814 HES1Q14469 280 aa3.16□□□□□ -1.9
HMGB1P50-201ENST00000605814 C3AR1Q16581 482 aa3.16□□□□□ -1.9
HMGB1P50-201ENST00000605814 ZNF672Q499Z4 452 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P50-201ENST00000605814 ZC2HC1BQ5TFG8 222 aa3.16□□□□□ -1.9
HMGB1P50-201ENST00000605814 RUSC1-AS1Q66K80 236 aa3.16□□□□□ -1.9
HMGB1P50-201ENST00000605814 TUSC5Q8IXB3 177 aa3.16□□□□□ -1.9
HMGB1P50-201ENST00000605814 Q8NA96 180 aa3.16□□□□□ -1.9
HMGB1P50-201ENST00000605814 OR13A1Q8NGR1 328 aa3.16□□□□□ -1.9
HMGB1P50-201ENST00000605814 ZNRF2Q8NHG8 242 aa3.16□□□□□ -1.9
HMGB1P50-201ENST00000605814 CXXC4Q9H2H0 198 aa3.16□□□□□ -1.9
HMGB1P50-201ENST00000605814 Q9H3A6 140 aa3.16□□□□□ -1.9
HMGB1P50-201ENST00000605814 PPDPFQ9H3Y8 114 aa3.16□□□□□ -1.9
HMGB1P50-201ENST00000605814 AKIRIN1Q9H9L7 192 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P50-201ENST00000605814 ONECUT1Q9UBC0 465 aa3.16□□□□□ -1.9
HMGB1P50-201ENST00000605814 FZR1Q9UM11 496 aa3.16□□□□□ -1.9
HMGB1P50-201ENST00000605814 PROCRQ9UNN8 238 aa3.16□□□□□ -1.9
HMGB1P50-201ENST00000605814 MYO7AQ13402 2215 aa3.16□□□□□ -1.9
HMGB1P50-201ENST00000605814 TRAV4A0A0B4J268 109 aa3.15□□□□□ -1.91
HMGB1P50-201ENST00000605814 NCBP2LA6PVI3 153 aaKnown RBP3.15□□□□□ -1.91
HMGB1P50-201ENST00000605814 CXCL13O43927 109 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms