RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 FHL3Q13643 280 aa9.35□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 C8orf86Q6ZUL3 223 aa9.35□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 OR10G8Q8NGN5 311 aa9.35□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 OR5B12Q96R08 314 aa9.35□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 ANK3Q12955 4377 aaKnown RBP9.35□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 TRAV2A0A0B4J234 112 aa9.34□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 COLCA2A8K830 154 aa9.34□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 H3BTX0 84 aa9.34□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 M0QZ24 198 aa9.34□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 SOCS3O14543 225 aa9.34□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 ZNF207O43670 478 aaKnown RBP9.34□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 CT83Q5H943 113 aa9.34□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 SAPCD1Q5SSQ6 148 aa9.34□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 KCNIP4Q6PIL6 250 aa9.34□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 GOLT1AQ6ZVE7 132 aa9.34□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 KLHL30-AS1Q8NEE0 82 aa9.34□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 DPF1Q92782 380 aa9.34□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 PYGO2Q9BRQ0 406 aa9.34□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 PFN1P07737 140 aaKnown RBP9.33□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 ELOBQ15370 118 aa9.33□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 TM4SF20Q53R12 229 aa9.33□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 LCN12Q6JVE5 192 aa9.33□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 OR1N2Q8NGR9 330 aa9.33□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 SIGLEC8Q9NYZ4 499 aa9.33□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 PSG8Q9UQ74 426 aa9.33□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 RNF114Q9Y508 228 aa9.33□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 LENEPQ9Y5L5 61 aa9.33□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 TRAV8-2A0A0B4J237 113 aa9.32□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 TRBV7-9A0A0J9YWB2 115 aa9.32□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 PGPEP1LA6NFU8 196 aa9.32□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 C2orf70A6NJV1 201 aa9.32□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 M0R3E3 92 aa9.32□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 SNRPCP09234 159 aaKnown RBP9.32□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 SYNJ2BPP57105 145 aa9.32□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 ERVFC1-1P60608 527 aa9.32□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 RPL19P84098 196 aaKnown RBP9.32□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 IBA57Q5T440 356 aaKnown RBP9.32□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 OR11H1Q8NG94 326 aa9.32□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 OR4B1Q8NGF8 309 aa9.32□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 C16orf92Q96LL3 132 aa9.32□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 LINC00479Q96M42 142 aa9.32□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 RPH3ALQ9UNE2 315 aa9.32□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 HIVEP1P15822 2718 aa9.32□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 TRAV34A0A0B4J273 112 aa9.31□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 IGHV3-66A0A0C4DH42 116 aa9.31□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 FAM231BA6NCW3 169 aa9.31□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 OVOL1O14753 267 aa9.31□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 TYMSP04818 313 aa9.31□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 CBLN1P23435 193 aa9.31□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 ID1P41134 155 aa9.31□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 C9orf47Q6ZRZ4 202 aa9.31□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 TCF24Q7RTU0 167 aa9.31□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 OR9G4Q8NGQ1 327 aa9.31□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 NDFIP1Q9BT67 221 aa9.31□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 IL36BQ9NZH7 164 aa9.31□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 V9GYV3 84 aa9.31□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 IGHV3OR16-13A0A075B7E8 117 aa9.3□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 IGHV3-49A0A0A0MS15 119 aa9.3□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 IGHV3-74A0A0B4J1X5 117 aa9.3□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 C19orf71A6NCJ1 209 aa9.3□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 NPIPB6E9PJ23 425 aa9.3□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 MGST1P10620 155 aaKnown RBP9.3□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 RAB5AP20339 215 aa9.3□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 KHDC1LQ5JSQ8 128 aa9.3□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 NDUFA11Q86Y39 141 aa9.3□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 FAM24BQ8N5W8 94 aa9.3□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 DCANP1Q8TF63 244 aa9.3□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 FN1P02751 2386 aaKnown RBP9.3□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 BAHCC1Q9P281 2608 aa9.29□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 TRAV25A0A0B4J276 109 aa9.29□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 CT45A10P0DMU9 189 aa9.29□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 CD28P10747 220 aa9.29□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 PAFAH1B2P68402 229 aa9.29□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 SRSF2Q01130 221 aaKnown RBP9.29□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 COX19Q49B96 90 aa9.29□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 PRNTQ86SH4 94 aa9.29□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 GBGT1Q8N5D6 347 aa9.29□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.29□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 PRR25Q96S07 402 aa9.29□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 GFRA4Q9GZZ7 299 aa9.29□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 TRAV8-1A0A0A6YYK1 113 aa9.28□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 SMIM27A0A1W2PRY6 76 aa9.28□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 CCL24O00175 119 aa9.28□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 GATCO43716 136 aaKnown RBP9.28□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 SLURP1P55000 103 aa9.28□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 OR5I1Q13606 314 aa9.28□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 TMEM78Q5T7P6 136 aa9.28□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 DAZAP1Q96EP5 407 aaKnown RBP9.28□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 RAX2Q96IS3 184 aa9.28□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 LINC00477Q96M19 166 aa9.28□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 CITED2Q99967 270 aaPredicted RBP9.28□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 SAV1Q9H4B6 383 aaPredicted RBP9.28□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 RPP21Q9H633 154 aaKnown RBP9.28□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 AURKAIP1Q9NWT8 199 aaPredicted RBP9.28□□□□□ -0.92
NEDD8-MDP1-203ENST00000604306 F8P00451 2351 aa9.27□□□□□ -0.93
NEDD8-MDP1-203ENST00000604306 IGKV2-40A0A087WW87 121 aaPredicted RBP9.27□□□□□ -0.93
NEDD8-MDP1-203ENST00000604306 ZNF705GA8MUZ8 300 aaPredicted RBP9.27□□□□□ -0.93
NEDD8-MDP1-203ENST00000604306 A8MWL6 223 aa9.27□□□□□ -0.93
NEDD8-MDP1-203ENST00000604306 K7EQG2 157 aa9.27□□□□□ -0.93
NEDD8-MDP1-203ENST00000604306 IGKV2D-40P01614 121 aaPredicted RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms