RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 SLC38A11Q08AI6 406 aa12.4□□□□□ -0.42
SHKBP1-227ENST00000602011 PYGO2Q9BRQ0 406 aa12.4□□□□□ -0.42
SHKBP1-227ENST00000602011 Q9H3A6 140 aa12.4□□□□□ -0.42
SHKBP1-227ENST00000602011 DNAJC4Q9NNZ3 241 aa12.4□□□□□ -0.42
SHKBP1-227ENST00000602011 TRAV26-1A0A087WT03 109 aa12.39□□□□□ -0.43
SHKBP1-227ENST00000602011 DAZ2Q13117 558 aaKnown RBP12.39□□□□□ -0.43
SHKBP1-227ENST00000602011 C10orf113Q5VZT2 155 aa12.39□□□□□ -0.43
SHKBP1-227ENST00000602011 C12orf45Q8N5I9 185 aaPredicted RBP12.39□□□□□ -0.43
SHKBP1-227ENST00000602011 ZBTB8BQ8NAP8 495 aaPredicted RBP12.39□□□□□ -0.43
SHKBP1-227ENST00000602011 OR1L4Q8NGR5 311 aa12.39□□□□□ -0.43
SHKBP1-227ENST00000602011 MITD1Q8WV92 249 aa12.39□□□□□ -0.43
SHKBP1-227ENST00000602011 GSKIPQ9P0R6 139 aa12.39□□□□□ -0.43
SHKBP1-227ENST00000602011 ZNF253O75346 499 aa12.38□□□□□ -0.43
SHKBP1-227ENST00000602011 SCGB1D2O95969 90 aa12.38□□□□□ -0.43
SHKBP1-227ENST00000602011 IGLC2P0DOY2 106 aa12.38□□□□□ -0.43
SHKBP1-227ENST00000602011 GFI1BQ5VTD9 330 aa12.38□□□□□ -0.43
SHKBP1-227ENST00000602011 TMEM37Q8WXS4 190 aa12.38□□□□□ -0.43
SHKBP1-227ENST00000602011 SAT2Q96F10 170 aaPredicted RBP12.38□□□□□ -0.43
SHKBP1-227ENST00000602011 C18orf15Q96N68 181 aa12.38□□□□□ -0.43
SHKBP1-227ENST00000602011 PFDN5Q99471 154 aa12.38□□□□□ -0.43
SHKBP1-227ENST00000602011 C7orf66A4D0T2 115 aa12.37□□□□□ -0.43
SHKBP1-227ENST00000602011 L7N2F9 121 aa12.37□□□□□ -0.43
SHKBP1-227ENST00000602011 CCNKO75909 580 aa12.37□□□□□ -0.43
SHKBP1-227ENST00000602011 VAMP2P63027 116 aa12.37□□□□□ -0.43
SHKBP1-227ENST00000602011 MRPL53Q96EL3 112 aaKnown RBP12.37□□□□□ -0.43
SHKBP1-227ENST00000602011 MRPS16Q9Y3D3 137 aaKnown RBP12.37□□□□□ -0.43
SHKBP1-227ENST00000602011 DNAH5Q8TE73 4624 aa12.37□□□□□ -0.43
SHKBP1-227ENST00000602011 GAGE12BA1L429 117 aa12.36□□□□□ -0.43
SHKBP1-227ENST00000602011 GAGE7O76087 117 aa12.36□□□□□ -0.43
SHKBP1-227ENST00000602011 SLC25A5P05141 298 aaKnown RBP12.36□□□□□ -0.43
SHKBP1-227ENST00000602011 GAGE12FP0CL80 117 aa12.36□□□□□ -0.43
SHKBP1-227ENST00000602011 GAGE12GP0CL81 117 aa12.36□□□□□ -0.43
SHKBP1-227ENST00000602011 GAGE12IP0CL82 117 aa12.36□□□□□ -0.43
SHKBP1-227ENST00000602011 CAMLGP49069 296 aa12.36□□□□□ -0.43
SHKBP1-227ENST00000602011 ZNF680Q8NEM1 530 aa12.36□□□□□ -0.43
SHKBP1-227ENST00000602011 C20orf85Q9H1P6 137 aa12.36□□□□□ -0.43
SHKBP1-227ENST00000602011 FLVCR2Q9UPI3 526 aa12.36□□□□□ -0.43
SHKBP1-227ENST00000602011 PRELID1Q9Y255 219 aa12.36□□□□□ -0.43
SHKBP1-227ENST00000602011 RCL1Q9Y2P8 373 aaKnown RBP12.36□□□□□ -0.43
SHKBP1-227ENST00000602011 NPIPB6E9PJ23 425 aa12.35□□□□□ -0.43
SHKBP1-227ENST00000602011 UPK1BO75841 260 aa12.35□□□□□ -0.43
SHKBP1-227ENST00000602011 MBPP02686 304 aaPredicted RBP12.35□□□□□ -0.43
SHKBP1-227ENST00000602011 OPCMLQ14982 345 aa12.35□□□□□ -0.43
SHKBP1-227ENST00000602011 ESRGQ1W209 222 aa12.35□□□□□ -0.43
SHKBP1-227ENST00000602011 SPATA12Q7Z6I5 190 aa12.35□□□□□ -0.43
SHKBP1-227ENST00000602011 Q8N1X5 172 aa12.35□□□□□ -0.43
SHKBP1-227ENST00000602011 ZNF431Q8TF32 576 aaPredicted RBP12.35□□□□□ -0.43
SHKBP1-227ENST00000602011 MGST2Q99735 147 aa12.35□□□□□ -0.43
SHKBP1-227ENST00000602011 LINC00467Q9BRT7 94 aa12.35□□□□□ -0.43
SHKBP1-227ENST00000602011 HERC1Q15751 4861 aa12.34□□□□□ -0.43
SHKBP1-227ENST00000602011 LINC00854A0A1B0GVQ3 168 aa12.34□□□□□ -0.43
SHKBP1-227ENST00000602011 PRAC2D3DTV9 90 aa12.34□□□□□ -0.43
SHKBP1-227ENST00000602011 PLA2G10O15496 165 aa12.34□□□□□ -0.43
SHKBP1-227ENST00000602011 LYRM1O43325 122 aa12.34□□□□□ -0.43
SHKBP1-227ENST00000602011 CT45A10P0DMU9 189 aa12.34□□□□□ -0.43
SHKBP1-227ENST00000602011 ARL16Q0P5N6 197 aa12.34□□□□□ -0.43
SHKBP1-227ENST00000602011 MZT2BQ6NZ67 158 aa12.34□□□□□ -0.43
SHKBP1-227ENST00000602011 CHAC2Q8WUX2 184 aa12.34□□□□□ -0.43
SHKBP1-227ENST00000602011 LINC00477Q96M19 166 aa12.34□□□□□ -0.43
SHKBP1-227ENST00000602011 TRAV12-3A0A0B4J271 114 aa12.33□□□□□ -0.44
SHKBP1-227ENST00000602011 A0A0J9YY99 117 aa12.33□□□□□ -0.44
SHKBP1-227ENST00000602011 H3BQ15 152 aa12.33□□□□□ -0.44
SHKBP1-227ENST00000602011 NMBP08949 121 aa12.33□□□□□ -0.44
SHKBP1-227ENST00000602011 PVALBP20472 110 aaPredicted RBP12.33□□□□□ -0.44
SHKBP1-227ENST00000602011 HOXA5P20719 270 aa12.33□□□□□ -0.44
SHKBP1-227ENST00000602011 RPL29P47914 159 aaKnown RBP12.33□□□□□ -0.44
SHKBP1-227ENST00000602011 NRARPQ7Z6K4 114 aa12.33□□□□□ -0.44
SHKBP1-227ENST00000602011 UQCC1Q9NVA1 299 aa12.33□□□□□ -0.44
SHKBP1-227ENST00000602011 SLC17A3O00476 420 aa12.32□□□□□ -0.44
SHKBP1-227ENST00000602011 S100A11P31949 105 aa12.32□□□□□ -0.44
SHKBP1-227ENST00000602011 BCAP31P51572 246 aa12.32□□□□□ -0.44
SHKBP1-227ENST00000602011 DEFA1P59665 94 aa12.32□□□□□ -0.44
SHKBP1-227ENST00000602011 DEFA3P59666 94 aa12.32□□□□□ -0.44
SHKBP1-227ENST00000602011 SLAQ13239 276 aa12.32□□□□□ -0.44
SHKBP1-227ENST00000602011 ASAH1Q13510 395 aa12.32□□□□□ -0.44
SHKBP1-227ENST00000602011 PDE6HQ13956 83 aa12.32□□□□□ -0.44
SHKBP1-227ENST00000602011 KIR3DS1Q14943 382 aa12.32□□□□□ -0.44
SHKBP1-227ENST00000602011 ANXA2RQ3ZCQ2 193 aa12.32□□□□□ -0.44
SHKBP1-227ENST00000602011 SCRT2Q9NQ03 307 aa12.32□□□□□ -0.44
SHKBP1-227ENST00000602011 TMEM14CQ9P0S9 112 aa12.32□□□□□ -0.44
SHKBP1-227ENST00000602011 WDR83OSQ9Y284 106 aa12.32□□□□□ -0.44
SHKBP1-227ENST00000602011 TRGV2A0A075B6R0 118 aa12.31□□□□□ -0.44
SHKBP1-227ENST00000602011 ATP6V1FQ16864 119 aa12.31□□□□□ -0.44
SHKBP1-227ENST00000602011 PGPEP1Q9NXJ5 209 aa12.31□□□□□ -0.44
SHKBP1-227ENST00000602011 TRBV19A0A075B6N1 114 aa12.3□□□□□ -0.44
SHKBP1-227ENST00000602011 C7orf71A4D174 169 aa12.3□□□□□ -0.44
SHKBP1-227ENST00000602011 SNRPCP09234 159 aaKnown RBP12.3□□□□□ -0.44
SHKBP1-227ENST00000602011 HIST1H1EP10412 219 aaKnown RBP12.3□□□□□ -0.44
SHKBP1-227ENST00000602011 CAV2P51636 162 aa12.3□□□□□ -0.44
SHKBP1-227ENST00000602011 HBG1P69891 147 aa12.3□□□□□ -0.44
SHKBP1-227ENST00000602011 HBG2P69892 147 aa12.3□□□□□ -0.44
SHKBP1-227ENST00000602011 VWC2Q2TAL6 325 aa12.3□□□□□ -0.44
SHKBP1-227ENST00000602011 MORN5Q5VZ52 161 aa12.3□□□□□ -0.44
SHKBP1-227ENST00000602011 EIF4E3Q8N5X7 224 aaKnown RBP12.3□□□□□ -0.44
SHKBP1-227ENST00000602011 PARD6GQ9BYG4 376 aaPredicted RBP12.3□□□□□ -0.44
SHKBP1-227ENST00000602011 SLC39A9Q9NUM3 307 aa12.3□□□□□ -0.44
SHKBP1-227ENST00000602011 FAM240BA0A1B0GVZ2 78 aa12.29□□□□□ -0.44
SHKBP1-227ENST00000602011 KLLNB2CW77 178 aa12.29□□□□□ -0.44
SHKBP1-227ENST00000602011 H3BTX0 84 aa12.29□□□□□ -0.44
SHKBP1-227ENST00000602011 EREGO14944 169 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms