RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 C19orf73Q9NVV2 129 aa17.07■□□□□ 0.32
IRF3-227ENST00000600911 RPH3ALQ9UNE2 315 aa17.07■□□□□ 0.32
IRF3-227ENST00000600911 LINC00862A6NCI5 91 aa17.06■□□□□ 0.32
IRF3-227ENST00000600911 ZNF705DP0CH99 300 aaPredicted RBP17.06■□□□□ 0.32
IRF3-227ENST00000600911 ZNF705BP0CI00 300 aaPredicted RBP17.06■□□□□ 0.32
IRF3-227ENST00000600911 SAMD5Q5TGI4 173 aa17.06■□□□□ 0.32
IRF3-227ENST00000600911 GDF5OSQ5U4N7 250 aa17.06■□□□□ 0.32
IRF3-227ENST00000600911 LYPD1Q8N2G4 141 aa17.06■□□□□ 0.32
IRF3-227ENST00000600911 SCO2A0A1W2PP80 73 aa17.05■□□□□ 0.32
IRF3-227ENST00000600911 SLC25A5P05141 298 aaKnown RBP17.05■□□□□ 0.32
IRF3-227ENST00000600911 PPT1P50897 306 aa17.05■□□□□ 0.32
IRF3-227ENST00000600911 DEFB131AP59861 70 aa17.05■□□□□ 0.32
IRF3-227ENST00000600911 ARL2-SNX15V9GYD0 113 aa17.05■□□□□ 0.32
IRF3-227ENST00000600911 OR4C46A6NHA9 309 aa17.04■□□□□ 0.32
IRF3-227ENST00000600911 MEF2BQ02080 365 aaPredicted RBP17.04■□□□□ 0.32
IRF3-227ENST00000600911 APRG1Q8IVJ8 170 aa17.04■□□□□ 0.32
IRF3-227ENST00000600911 EIF5A2Q9GZV4 153 aaKnown RBP17.04■□□□□ 0.32
IRF3-227ENST00000600911 AAMDCQ9H7C9 122 aa17.04■□□□□ 0.32
IRF3-227ENST00000600911 VAX2Q9UIW0 290 aa17.04■□□□□ 0.32
IRF3-227ENST00000600911 IGKV2-40A0A087WW87 121 aaPredicted RBP17.03■□□□□ 0.32
IRF3-227ENST00000600911 IFNA1P01562 189 aa17.03■□□□□ 0.32
IRF3-227ENST00000600911 IGKV2D-40P01614 121 aaPredicted RBP17.03■□□□□ 0.32
IRF3-227ENST00000600911 COMMD7Q86VX2 200 aa17.03■□□□□ 0.32
IRF3-227ENST00000600911 LINC00479Q96M42 142 aa17.03■□□□□ 0.32
IRF3-227ENST00000600911 ASCL2Q99929 193 aa17.03■□□□□ 0.32
IRF3-227ENST00000600911 ZNF738Q8NE65 137 aa17.03■□□□□ 0.32
IRF3-227ENST00000600911 RPUSD4Q96CM3 377 aaKnown RBP17.03■□□□□ 0.32
IRF3-227ENST00000600911 SGK494Q96LW2 274 aa17.03■□□□□ 0.32
IRF3-227ENST00000600911 PRR25Q96S07 402 aa17.03■□□□□ 0.32
IRF3-227ENST00000600911 MED9Q9NWA0 146 aa17.03■□□□□ 0.32
IRF3-227ENST00000600911 EPDR1Q9UM22 224 aa17.03■□□□□ 0.32
IRF3-227ENST00000600911 DIRC3C9JPN6 131 aa17.02■□□□□ 0.31
IRF3-227ENST00000600911 ID1P41134 155 aa17.02■□□□□ 0.31
IRF3-227ENST00000600911 EGFEM1PQ0D2K5 195 aa17.02■□□□□ 0.31
IRF3-227ENST00000600911 C5orf17Q8NAS9 161 aa17.02■□□□□ 0.31
IRF3-227ENST00000600911 CITED4Q96RK1 184 aa17.02■□□□□ 0.31
IRF3-227ENST00000600911 KNCNA6PVL3 124 aa17.01■□□□□ 0.31
IRF3-227ENST00000600911 TCRAP04437 139 aa17.01■□□□□ 0.31
IRF3-227ENST00000600911 DERL1Q9BUN8 251 aa17.01■□□□□ 0.31
IRF3-227ENST00000600911 TRAV8-1A0A0A6YYK1 113 aa17■□□□□ 0.31
IRF3-227ENST00000600911 SRP19P09132 144 aaKnown RBP17■□□□□ 0.31
IRF3-227ENST00000600911 SNRPD3P62318 126 aaKnown RBP17■□□□□ 0.31
IRF3-227ENST00000600911 ERCC8Q13216 396 aa17■□□□□ 0.31
IRF3-227ENST00000600911 GOLT1AQ6ZVE7 132 aa17■□□□□ 0.31
IRF3-227ENST00000600911 SLC7A5P1Q8MH63 180 aa17■□□□□ 0.31
IRF3-227ENST00000600911 VGLL1Q99990 258 aa17■□□□□ 0.31
IRF3-227ENST00000600911 TRAV34A0A0B4J273 112 aa16.99■□□□□ 0.31
IRF3-227ENST00000600911 PEX7O00628 323 aa16.99■□□□□ 0.31
IRF3-227ENST00000600911 MRPL53Q96EL3 112 aaKnown RBP16.99■□□□□ 0.31
IRF3-227ENST00000600911 MGAM2Q2M2H8 2515 aa16.99■□□□□ 0.31
IRF3-227ENST00000600911 Q8N1Y9 231 aa16.99■□□□□ 0.31
IRF3-227ENST00000600911 C2CD4CQ8TF44 421 aa16.99■□□□□ 0.31
IRF3-227ENST00000600911 RAB19A4D1S5 217 aa16.98■□□□□ 0.31
IRF3-227ENST00000600911 SAMD13Q5VXD3 122 aa16.98■□□□□ 0.31
IRF3-227ENST00000600911 CMTM2Q8TAZ6 248 aa16.98■□□□□ 0.31
IRF3-227ENST00000600911 C11orf52Q96A22 123 aa16.98■□□□□ 0.31
IRF3-227ENST00000600911 PRELID1Q9Y255 219 aa16.98■□□□□ 0.31
IRF3-227ENST00000600911 IGLV2-11P01706 119 aa16.97■□□□□ 0.31
IRF3-227ENST00000600911 CYB561D1Q8N8Q1 229 aa16.97■□□□□ 0.31
IRF3-227ENST00000600911 NKX6-2Q9C056 277 aaPredicted RBP16.97■□□□□ 0.31
IRF3-227ENST00000600911 DEFB125Q8N687 156 aa16.96■□□□□ 0.31
IRF3-227ENST00000600911 OR8A1Q8NGG7 326 aa16.96■□□□□ 0.31
IRF3-227ENST00000600911 ATG101Q9BSB4 218 aa16.96■□□□□ 0.31
IRF3-227ENST00000600911 SAV1Q9H4B6 383 aaPredicted RBP16.96■□□□□ 0.31
IRF3-227ENST00000600911 NOTCH1P46531 2555 aa16.96■□□□□ 0.31
IRF3-227ENST00000600911 A0A0J9YX75 114 aa16.96■□□□□ 0.3
IRF3-227ENST00000600911 RBMY1BA6NDE4 496 aaKnown RBP16.96■□□□□ 0.3
IRF3-227ENST00000600911 RBMY1EA6NEQ0 496 aaKnown RBP16.96■□□□□ 0.3
IRF3-227ENST00000600911 OR11H12B2RN74 326 aa16.96■□□□□ 0.3
IRF3-227ENST00000600911 RBMY1DP0C7P1 496 aaKnown RBP16.96■□□□□ 0.3
IRF3-227ENST00000600911 Q8TAT8 98 aa16.96■□□□□ 0.3
IRF3-227ENST00000600911 GPR61Q9BZJ8 451 aa16.96■□□□□ 0.3
IRF3-227ENST00000600911 TREM1Q9NP99 234 aa16.96■□□□□ 0.3
IRF3-227ENST00000600911 CLEC5AQ9NY25 188 aa16.96■□□□□ 0.3
IRF3-227ENST00000600911 PRB2P02812 416 aaPredicted RBP16.95■□□□□ 0.3
IRF3-227ENST00000600911 TAGLN2P37802 199 aaKnown RBP16.95■□□□□ 0.3
IRF3-227ENST00000600911 CEBPGP53567 150 aa16.95■□□□□ 0.3
IRF3-227ENST00000600911 HIST1H1AQ02539 215 aaPredicted RBP16.95■□□□□ 0.3
IRF3-227ENST00000600911 ACTL10Q5JWF8 245 aa16.95■□□□□ 0.3
IRF3-227ENST00000600911 TXNDC17Q9BRA2 123 aa16.95■□□□□ 0.3
IRF3-227ENST00000600911 AGPAT4-IT1Q9H0P7 198 aa16.95■□□□□ 0.3
IRF3-227ENST00000600911 IGKV3-20P01619 116 aa16.94■□□□□ 0.3
IRF3-227ENST00000600911 CSN1S1P47710 185 aa16.94■□□□□ 0.3
IRF3-227ENST00000600911 CNN1P51911 297 aaKnown RBP16.94■□□□□ 0.3
IRF3-227ENST00000600911 PEA15Q15121 130 aa16.94■□□□□ 0.3
IRF3-227ENST00000600911 HIST1H2BAQ96A08 127 aa16.94■□□□□ 0.3
IRF3-227ENST00000600911 TVP23CQ96ET8 276 aa16.94■□□□□ 0.3
IRF3-227ENST00000600911 NBEAL1Q6ZS30 2694 aa16.93■□□□□ 0.3
IRF3-227ENST00000600911 PDE6DO43924 150 aa16.93■□□□□ 0.3
IRF3-227ENST00000600911 TRBV20OR9-2A0A075B6H5 130 aa16.92■□□□□ 0.3
IRF3-227ENST00000600911 NPIPB6E9PJ23 425 aa16.92■□□□□ 0.3
IRF3-227ENST00000600911 F6UZH7 168 aa16.92■□□□□ 0.3
IRF3-227ENST00000600911 FOXI2Q6ZQN5 318 aa16.92■□□□□ 0.3
IRF3-227ENST00000600911 EIF4E3Q8N5X7 224 aaKnown RBP16.92■□□□□ 0.3
IRF3-227ENST00000600911 PARLQ9H300 379 aa16.92■□□□□ 0.3
IRF3-227ENST00000600911 H3BMM0 161 aa16.92■□□□□ 0.3
IRF3-227ENST00000600911 AKR1C3P42330 323 aa16.92■□□□□ 0.3
IRF3-227ENST00000600911 FAM110AQ9BQ89 295 aa16.92■□□□□ 0.3
IRF3-227ENST00000600911 TMEM250H0YL14 139 aa16.91■□□□□ 0.3
IRF3-227ENST00000600911 CT45A10P0DMU9 189 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms