RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 RBMY1DP0C7P1 496 aaKnown RBP13.9□□□□□ -0.18
CCDC9-205ENST00000600117 MBD3L1Q8WWY6 194 aa13.9□□□□□ -0.18
CCDC9-205ENST00000600117 KRTAP17-1Q9BYP8 105 aa13.9□□□□□ -0.18
CCDC9-205ENST00000600117 TUBA4BQ9H853 241 aa13.9□□□□□ -0.18
CCDC9-205ENST00000600117 AGRNO00468 2067 aa13.89□□□□□ -0.19
CCDC9-205ENST00000600117 MAP1LC3B2A6NCE7 125 aa13.89□□□□□ -0.19
CCDC9-205ENST00000600117 FRMD6-AS1P0C7T7 363 aa13.89□□□□□ -0.19
CCDC9-205ENST00000600117 RAB5CP51148 216 aa13.89□□□□□ -0.19
CCDC9-205ENST00000600117 FAM74A1Q5RGS3 127 aa13.89□□□□□ -0.19
CCDC9-205ENST00000600117 MAP1LC3BQ9GZQ8 125 aa13.89□□□□□ -0.19
CCDC9-205ENST00000600117 CLEC5AQ9NY25 188 aa13.89□□□□□ -0.19
CCDC9-205ENST00000600117 FGF8P55075 233 aaPredicted RBP13.88□□□□□ -0.19
CCDC9-205ENST00000600117 PSG9Q00887 426 aa13.88□□□□□ -0.19
CCDC9-205ENST00000600117 GDF5OSQ5U4N7 250 aa13.88□□□□□ -0.19
CCDC9-205ENST00000600117 ALKAL2Q6UX46 152 aa13.88□□□□□ -0.19
CCDC9-205ENST00000600117 FOXI2Q6ZQN5 318 aa13.88□□□□□ -0.19
CCDC9-205ENST00000600117 EXOC3-AS1Q8N2X6 119 aa13.88□□□□□ -0.19
CCDC9-205ENST00000600117 ASCL2Q99929 193 aa13.88□□□□□ -0.19
CCDC9-205ENST00000600117 TMPRSS5Q9H3S3 457 aa13.88□□□□□ -0.19
CCDC9-205ENST00000600117 SAV1Q9H4B6 383 aaPredicted RBP13.88□□□□□ -0.19
CCDC9-205ENST00000600117 A0A0J9YX75 114 aa13.87□□□□□ -0.19
CCDC9-205ENST00000600117 ZNF705FA8MVS1 300 aaPredicted RBP13.87□□□□□ -0.19
CCDC9-205ENST00000600117 F6UB75 175 aa13.87□□□□□ -0.19
CCDC9-205ENST00000600117 HLA-DRB4P13762 266 aa13.87□□□□□ -0.19
CCDC9-205ENST00000600117 ACTL10Q5JWF8 245 aa13.87□□□□□ -0.19
CCDC9-205ENST00000600117 TRPT1Q86TN4 253 aaKnown RBP13.87□□□□□ -0.19
CCDC9-205ENST00000600117 LYPD1Q8N2G4 141 aa13.87□□□□□ -0.19
CCDC9-205ENST00000600117 ZNF738Q8NE65 137 aa13.87□□□□□ -0.19
CCDC9-205ENST00000600117 RPUSD4Q96CM3 377 aaKnown RBP13.87□□□□□ -0.19
CCDC9-205ENST00000600117 MRPL53Q96EL3 112 aaKnown RBP13.87□□□□□ -0.19
CCDC9-205ENST00000600117 Q9H3A6 140 aa13.87□□□□□ -0.19
CCDC9-205ENST00000600117 TMEM167BQ9NRX6 74 aa13.87□□□□□ -0.19
CCDC9-205ENST00000600117 HLA-DRB4X5D2U9 266 aa13.87□□□□□ -0.19
CCDC9-205ENST00000600117 H3BMM0 161 aa13.86□□□□□ -0.19
CCDC9-205ENST00000600117 M0R3E3 92 aa13.86□□□□□ -0.19
CCDC9-205ENST00000600117 H2AFB1P0C5Y9 115 aa13.86□□□□□ -0.19
CCDC9-205ENST00000600117 PRB4P10163 310 aaPredicted RBP13.86□□□□□ -0.19
CCDC9-205ENST00000600117 RANP62826 216 aaKnown RBP13.86□□□□□ -0.19
CCDC9-205ENST00000600117 ICAM4Q14773 271 aa13.86□□□□□ -0.19
CCDC9-205ENST00000600117 SFT2D1Q8WV19 159 aa13.86□□□□□ -0.19
CCDC9-205ENST00000600117 PRELID1Q9Y255 219 aa13.86□□□□□ -0.19
CCDC9-205ENST00000600117 LOC102724200A0A096LPH7 203 aaPredicted RBP13.85□□□□□ -0.19
CCDC9-205ENST00000600117 PRAC2D3DTV9 90 aa13.85□□□□□ -0.19
CCDC9-205ENST00000600117 RPL35AP18077 110 aaKnown RBP13.85□□□□□ -0.19
CCDC9-205ENST00000600117 STHQ8IWL8 128 aa13.85□□□□□ -0.19
CCDC9-205ENST00000600117 AAMDCQ9H7C9 122 aa13.85□□□□□ -0.19
CCDC9-205ENST00000600117 A8MTW9 85 aa13.84□□□□□ -0.19
CCDC9-205ENST00000600117 EBLN2Q6P2I7 272 aa13.84□□□□□ -0.19
CCDC9-205ENST00000600117 IQCF2Q8IXL9 164 aa13.84□□□□□ -0.19
CCDC9-205ENST00000600117 OR8A1Q8NGG7 326 aa13.84□□□□□ -0.19
CCDC9-205ENST00000600117 TRAV1-1A0A0B4J248 108 aa13.83□□□□□ -0.2
CCDC9-205ENST00000600117 ZNF705DP0CH99 300 aaPredicted RBP13.83□□□□□ -0.2
CCDC9-205ENST00000600117 ZNF705BP0CI00 300 aaPredicted RBP13.83□□□□□ -0.2
CCDC9-205ENST00000600117 CLUHP3Q96NS8 147 aa13.83□□□□□ -0.2
CCDC9-205ENST00000600117 OTORQ9NRC9 128 aa13.83□□□□□ -0.2
CCDC9-205ENST00000600117 PLECQ15149 4684 aaKnown RBP13.83□□□□□ -0.2
CCDC9-205ENST00000600117 A0A1B0GV50 99 aa13.82□□□□□ -0.2
CCDC9-205ENST00000600117 PGPA6NDG6 321 aa13.82□□□□□ -0.2
CCDC9-205ENST00000600117 HAGHQ16775 308 aa13.82□□□□□ -0.2
CCDC9-205ENST00000600117 SBSPONQ8IVN8 264 aa13.82□□□□□ -0.2
CCDC9-205ENST00000600117 YTHDF2Q9Y5A9 579 aaKnown RBP13.82□□□□□ -0.2
CCDC9-205ENST00000600117 KIR2DL5BA0A0G2JN68 375 aa13.81□□□□□ -0.2
CCDC9-205ENST00000600117 KIR2DL5BA0A0G2JPC4 375 aa13.81□□□□□ -0.2
CCDC9-205ENST00000600117 A0A1W2PRE2 83 aa13.81□□□□□ -0.2
CCDC9-205ENST00000600117 ZNF705EA8MWA4 302 aaPredicted RBP13.81□□□□□ -0.2
CCDC9-205ENST00000600117 GGTLC3B5MD39 225 aa13.81□□□□□ -0.2
CCDC9-205ENST00000600117 CNN1P51911 297 aaKnown RBP13.81□□□□□ -0.2
CCDC9-205ENST00000600117 HIST1H1AQ02539 215 aaPredicted RBP13.81□□□□□ -0.2
CCDC9-205ENST00000600117 AMTNQ6UX39 209 aa13.81□□□□□ -0.2
CCDC9-205ENST00000600117 KIR2DL5AQ8N109 375 aa13.81□□□□□ -0.2
CCDC9-205ENST00000600117 KIR2DL5BQ8NHK3 375 aa13.81□□□□□ -0.2
CCDC9-205ENST00000600117 RCHY1Q96PM5 261 aa13.81□□□□□ -0.2
CCDC9-205ENST00000600117 DUSP14O95147 198 aaKnown RBP13.8□□□□□ -0.2
CCDC9-205ENST00000600117 IGKV3-20P01619 116 aa13.8□□□□□ -0.2
CCDC9-205ENST00000600117 GIG44P09565 113 aaPredicted RBP13.8□□□□□ -0.2
CCDC9-205ENST00000600117 CCL20P78556 96 aa13.8□□□□□ -0.2
CCDC9-205ENST00000600117 TEX261Q6UWH6 196 aa13.8□□□□□ -0.2
CCDC9-205ENST00000600117 OR4B1Q8NGF8 309 aa13.8□□□□□ -0.2
CCDC9-205ENST00000600117 FAM74A7A6NL05 159 aa13.79□□□□□ -0.2
CCDC9-205ENST00000600117 NPIPB6E9PJ23 425 aa13.79□□□□□ -0.2
CCDC9-205ENST00000600117 HBE1P02100 147 aa13.79□□□□□ -0.2
CCDC9-205ENST00000600117 APOC4P55056 127 aa13.79□□□□□ -0.2
CCDC9-205ENST00000600117 UBE2G2P60604 165 aa13.79□□□□□ -0.2
CCDC9-205ENST00000600117 ARL6IP6Q8N6S5 226 aa13.79□□□□□ -0.2
CCDC9-205ENST00000600117 CSTL1Q9H114 145 aa13.79□□□□□ -0.2
CCDC9-205ENST00000600117 IGKV2-40A0A087WW87 121 aaPredicted RBP13.78□□□□□ -0.2
CCDC9-205ENST00000600117 IGKV2D-40P01614 121 aaPredicted RBP13.78□□□□□ -0.2
CCDC9-205ENST00000600117 SUMO1P63165 101 aaKnown RBP13.78□□□□□ -0.2
CCDC9-205ENST00000600117 MORN3Q6PF18 240 aaPredicted RBP13.78□□□□□ -0.2
CCDC9-205ENST00000600117 ZNF680Q8NEM1 530 aa13.78□□□□□ -0.2
CCDC9-205ENST00000600117 OR10J6PQ8NGY7 276 aa13.78□□□□□ -0.2
CCDC9-205ENST00000600117 RXFP4Q8TDU9 374 aa13.78□□□□□ -0.2
CCDC9-205ENST00000600117 ARL2-SNX15V9GYD0 113 aa13.78□□□□□ -0.2
CCDC9-205ENST00000600117 DIRC3C9JPN6 131 aa13.77□□□□□ -0.21
CCDC9-205ENST00000600117 UBE2CO00762 179 aa13.77□□□□□ -0.21
CCDC9-205ENST00000600117 SLC25A5P05141 298 aaKnown RBP13.77□□□□□ -0.21
CCDC9-205ENST00000600117 CSN1S1P47710 185 aa13.77□□□□□ -0.21
CCDC9-205ENST00000600117 GNG5P63218 68 aa13.77□□□□□ -0.21
CCDC9-205ENST00000600117 BLOC1S1P78537 153 aa13.77□□□□□ -0.21
CCDC9-205ENST00000600117 ERCC8Q13216 396 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms