RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 CNIH1O95406 144 aa11.67□□□□□ -0.54
SMARCA4-219ENST00000592604 FCGR2BP31994 310 aaPredicted RBP11.67□□□□□ -0.54
SMARCA4-219ENST00000592604 SMAGPQ0VAQ4 97 aa11.67□□□□□ -0.54
SMARCA4-219ENST00000592604 CNOT1A5YKK6 2376 aaKnown RBP11.67□□□□□ -0.54
SMARCA4-219ENST00000592604 TMEM189A5PLL7 270 aa11.66□□□□□ -0.54
SMARCA4-219ENST00000592604 SNAI2O43623 268 aa11.66□□□□□ -0.54
SMARCA4-219ENST00000592604 PAX8Q06710 450 aa11.66□□□□□ -0.54
SMARCA4-219ENST00000592604 BOD1L2Q8IYS8 172 aa11.66□□□□□ -0.54
SMARCA4-219ENST00000592604 ORMDL3Q8N138 153 aa11.66□□□□□ -0.54
SMARCA4-219ENST00000592604 OR8A1Q8NGG7 326 aa11.66□□□□□ -0.54
SMARCA4-219ENST00000592604 GAGE12BA1L429 117 aa11.66□□□□□ -0.54
SMARCA4-219ENST00000592604 TMEM213A2RRL7 107 aa11.66□□□□□ -0.54
SMARCA4-219ENST00000592604 KLK10O43240 276 aa11.66□□□□□ -0.54
SMARCA4-219ENST00000592604 COX7A1P24310 79 aa11.66□□□□□ -0.54
SMARCA4-219ENST00000592604 PCNX1Q96RV3 2341 aa11.66□□□□□ -0.54
SMARCA4-219ENST00000592604 RAB1BQ9H0U4 201 aa11.66□□□□□ -0.54
SMARCA4-219ENST00000592604 AAMDCQ9H7C9 122 aa11.66□□□□□ -0.54
SMARCA4-219ENST00000592604 LOC389332A0A1B0GUA5 103 aa11.65□□□□□ -0.54
SMARCA4-219ENST00000592604 AZU1P20160 251 aa11.65□□□□□ -0.54
SMARCA4-219ENST00000592604 AMN1Q8IY45 258 aa11.65□□□□□ -0.54
SMARCA4-219ENST00000592604 RABAC1Q9UI14 185 aa11.65□□□□□ -0.54
SMARCA4-219ENST00000592604 SH2D1AO60880 128 aa11.65□□□□□ -0.54
SMARCA4-219ENST00000592604 MRPL51Q4U2R6 128 aaKnown RBP11.65□□□□□ -0.54
SMARCA4-219ENST00000592604 EP300Q09472 2414 aaPredicted RBP11.65□□□□□ -0.54
SMARCA4-219ENST00000592604 H3BRM9 83 aa11.64□□□□□ -0.55
SMARCA4-219ENST00000592604 SIVA1O15304 175 aa11.64□□□□□ -0.55
SMARCA4-219ENST00000592604 PRB4P10163 310 aaPredicted RBP11.64□□□□□ -0.55
SMARCA4-219ENST00000592604 NPFFR1Q9GZQ6 430 aa11.64□□□□□ -0.55
SMARCA4-219ENST00000592604 TIMM23O14925 209 aa11.64□□□□□ -0.55
SMARCA4-219ENST00000592604 HBDP02042 147 aa11.64□□□□□ -0.55
SMARCA4-219ENST00000592604 OR9G4Q8NGQ1 327 aa11.64□□□□□ -0.55
SMARCA4-219ENST00000592604 GTSF1LQ9H1H1 148 aa11.64□□□□□ -0.55
SMARCA4-219ENST00000592604 UFSP1Q6NVU6 142 aa11.63□□□□□ -0.55
SMARCA4-219ENST00000592604 BCL6BQ8N143 479 aaPredicted RBP11.63□□□□□ -0.55
SMARCA4-219ENST00000592604 G3V4G9 280 aa11.63□□□□□ -0.55
SMARCA4-219ENST00000592604 NBR2O15453 112 aa11.63□□□□□ -0.55
SMARCA4-219ENST00000592604 SCGB1A1P11684 91 aa11.63□□□□□ -0.55
SMARCA4-219ENST00000592604 GFRALQ6UXV0 394 aa11.63□□□□□ -0.55
SMARCA4-219ENST00000592604 NPBQ8NG41 125 aa11.63□□□□□ -0.55
SMARCA4-219ENST00000592604 SS18L2Q9UHA2 77 aa11.63□□□□□ -0.55
SMARCA4-219ENST00000592604 A6NDN8 102 aa11.63□□□□□ -0.55
SMARCA4-219ENST00000592604 C9orf118A6NHY6 69 aa11.63□□□□□ -0.55
SMARCA4-219ENST00000592604 SMAD7O15105 426 aaKnown RBP11.63□□□□□ -0.55
SMARCA4-219ENST00000592604 NDUFA3O95167 84 aa11.63□□□□□ -0.55
SMARCA4-219ENST00000592604 CACNG7P62955 275 aa11.63□□□□□ -0.55
SMARCA4-219ENST00000592604 TMSB15BA0A087X1C1 80 aa11.62□□□□□ -0.55
SMARCA4-219ENST00000592604 GAGE10A6NGK3 116 aa11.62□□□□□ -0.55
SMARCA4-219ENST00000592604 FBLL1A6NHQ2 334 aaKnown RBP11.62□□□□□ -0.55
SMARCA4-219ENST00000592604 ID1P41134 155 aa11.62□□□□□ -0.55
SMARCA4-219ENST00000592604 HSD52Q0P140 79 aa11.62□□□□□ -0.55
SMARCA4-219ENST00000592604 MFAP4P55083 255 aa11.62□□□□□ -0.55
SMARCA4-219ENST00000592604 IFI27L1Q96BM0 104 aa11.62□□□□□ -0.55
SMARCA4-219ENST00000592604 FANCD2OSQ96PS1 177 aa11.62□□□□□ -0.55
SMARCA4-219ENST00000592604 PRR25Q96S07 402 aa11.62□□□□□ -0.55
SMARCA4-219ENST00000592604 MAP1BP46821 2468 aaKnown RBP11.61□□□□□ -0.55
SMARCA4-219ENST00000592604 IGLV11-55A0A075B6I3 123 aa11.61□□□□□ -0.55
SMARCA4-219ENST00000592604 A1L4Q6 167 aa11.61□□□□□ -0.55
SMARCA4-219ENST00000592604 LYNX1G3V0Z9 82 aa11.61□□□□□ -0.55
SMARCA4-219ENST00000592604 LYNX1P0DP58 116 aa11.61□□□□□ -0.55
SMARCA4-219ENST00000592604 KLF17Q5JT82 389 aaPredicted RBP11.61□□□□□ -0.55
SMARCA4-219ENST00000592604 ADAMTSL5Q6ZMM2 481 aa11.61□□□□□ -0.55
SMARCA4-219ENST00000592604 OR4X2Q8NGF9 303 aa11.61□□□□□ -0.55
SMARCA4-219ENST00000592604 CFHR4Q92496 578 aa11.61□□□□□ -0.55
SMARCA4-219ENST00000592604 ZZEF1O43149 2961 aa11.61□□□□□ -0.55
SMARCA4-219ENST00000592604 F8W735 103 aaPredicted RBP11.61□□□□□ -0.55
SMARCA4-219ENST00000592604 EGR2P11161 476 aaPredicted RBP11.61□□□□□ -0.55
SMARCA4-219ENST00000592604 MGAQ8IWI9 3026 aa11.61□□□□□ -0.55
SMARCA4-219ENST00000592604 POLEQ07864 2286 aa11.61□□□□□ -0.55
SMARCA4-219ENST00000592604 NPIPB5A8MRT5 1133 aa11.6□□□□□ -0.55
SMARCA4-219ENST00000592604 NPYP01303 97 aa11.6□□□□□ -0.55
SMARCA4-219ENST00000592604 IGLC6P0CF74 106 aa11.6□□□□□ -0.55
SMARCA4-219ENST00000592604 CKS2P33552 79 aa11.6□□□□□ -0.55
SMARCA4-219ENST00000592604 GTF2H5Q6ZYL4 71 aa11.6□□□□□ -0.55
SMARCA4-219ENST00000592604 LY6G5BQ8NDX9 201 aa11.6□□□□□ -0.55
SMARCA4-219ENST00000592604 UQCRFS1P47985 274 aa11.6□□□□□ -0.55
SMARCA4-219ENST00000592604 PIFOQ8TCI5 191 aa11.6□□□□□ -0.55
SMARCA4-219ENST00000592604 SPXQ9BT56 116 aa11.6□□□□□ -0.55
SMARCA4-219ENST00000592604 COL25A1Q9BXS0 654 aaPredicted RBP11.6□□□□□ -0.55
SMARCA4-219ENST00000592604 DPM3Q9P2X0 92 aa11.6□□□□□ -0.55
SMARCA4-219ENST00000592604 S4R3C0 116 aa11.6□□□□□ -0.55
SMARCA4-219ENST00000592604 NDUFS7O75251 213 aa11.59□□□□□ -0.55
SMARCA4-219ENST00000592604 RPL7P18124 248 aaKnown RBP11.59□□□□□ -0.55
SMARCA4-219ENST00000592604 SRSF2Q01130 221 aaKnown RBP11.59□□□□□ -0.55
SMARCA4-219ENST00000592604 ZNF575Q86XF7 245 aa11.59□□□□□ -0.55
SMARCA4-219ENST00000592604 FER1L6-AS1Q8NA97 138 aa11.59□□□□□ -0.55
SMARCA4-219ENST00000592604 IGKV2-40A0A087WW87 121 aaPredicted RBP11.59□□□□□ -0.55
SMARCA4-219ENST00000592604 LINC01546A6NGU7 62 aa11.59□□□□□ -0.55
SMARCA4-219ENST00000592604 IGKV2D-40P01614 121 aaPredicted RBP11.59□□□□□ -0.55
SMARCA4-219ENST00000592604 FXYD7P58549 80 aa11.59□□□□□ -0.55
SMARCA4-219ENST00000592604 OR11H6Q8NGC7 330 aa11.59□□□□□ -0.55
SMARCA4-219ENST00000592604 AP1S3Q96PC3 154 aa11.59□□□□□ -0.55
SMARCA4-219ENST00000592604 THYN1Q9P016 225 aa11.59□□□□□ -0.55
SMARCA4-219ENST00000592604 TRBV7-9A0A0J9YWB2 115 aa11.59□□□□□ -0.55
SMARCA4-219ENST00000592604 KALRNO60229 2985 aa11.59□□□□□ -0.55
SMARCA4-219ENST00000592604 CD3EP07766 207 aa11.58□□□□□ -0.56
SMARCA4-219ENST00000592604 ZNF80P51504 273 aaPredicted RBP11.58□□□□□ -0.56
SMARCA4-219ENST00000592604 KIR3DS1Q14943 382 aa11.58□□□□□ -0.56
SMARCA4-219ENST00000592604 TWIST1Q15672 202 aa11.58□□□□□ -0.56
SMARCA4-219ENST00000592604 PSMG3-AS1Q96PY0 264 aa11.58□□□□□ -0.56
SMARCA4-219ENST00000592604 JMJD8Q96S16 334 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms