RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 IGHV3-48P01763 117 aa4.94□□□□□ -1.62
SMAD4-212ENST00000591126 IGKV1-16P04430 117 aa4.94□□□□□ -1.62
SMAD4-212ENST00000591126 STAG3L2P0CL84 134 aa4.94□□□□□ -1.62
SMAD4-212ENST00000591126 P0DMU3 169 aa4.94□□□□□ -1.62
SMAD4-212ENST00000591126 FAM231AP0DMU4 169 aa4.94□□□□□ -1.62
SMAD4-212ENST00000591126 FAM231CP0DMU5 169 aa4.94□□□□□ -1.62
SMAD4-212ENST00000591126 KRTDAPP60985 99 aa4.94□□□□□ -1.62
SMAD4-212ENST00000591126 Q0VG73 95 aa4.94□□□□□ -1.62
SMAD4-212ENST00000591126 RASL10AQ92737 203 aa4.94□□□□□ -1.62
SMAD4-212ENST00000591126 LIME1Q9H400 295 aa4.94□□□□□ -1.62
SMAD4-212ENST00000591126 RTTNQ86VV8 2226 aa4.94□□□□□ -1.62
SMAD4-212ENST00000591126 LINC00862A6NCI5 91 aa4.94□□□□□ -1.62
SMAD4-212ENST00000591126 J3QR89 54 aa4.94□□□□□ -1.62
SMAD4-212ENST00000591126 TFF1P04155 84 aa4.94□□□□□ -1.62
SMAD4-212ENST00000591126 CENPWQ5EE01 88 aa4.94□□□□□ -1.62
SMAD4-212ENST00000591126 MIR17HGQ75NE6 70 aa4.94□□□□□ -1.62
SMAD4-212ENST00000591126 LINC01006Q8NI28 216 aa4.94□□□□□ -1.62
SMAD4-212ENST00000591126 GLMPQ8WWB7 406 aa4.94□□□□□ -1.62
SMAD4-212ENST00000591126 SIGLEC8Q9NYZ4 499 aa4.94□□□□□ -1.62
SMAD4-212ENST00000591126 RANBP2P49792 3224 aaKnown RBP4.94□□□□□ -1.62
SMAD4-212ENST00000591126 A0A1B0GW64 132 aa4.94□□□□□ -1.62
SMAD4-212ENST00000591126 GATA2P23769 480 aaPredicted RBP4.94□□□□□ -1.62
SMAD4-212ENST00000591126 ZNF134P52741 427 aa4.94□□□□□ -1.62
SMAD4-212ENST00000591126 RSPO1Q2MKA7 263 aaPredicted RBP4.94□□□□□ -1.62
SMAD4-212ENST00000591126 ZNF506Q5JVG8 444 aa4.94□□□□□ -1.62
SMAD4-212ENST00000591126 BBC3Q96PG8 261 aaPredicted RBP4.94□□□□□ -1.62
SMAD4-212ENST00000591126 ODF3Q96PU9 254 aa4.94□□□□□ -1.62
SMAD4-212ENST00000591126 PRR13Q9NZ81 148 aa4.94□□□□□ -1.62
SMAD4-212ENST00000591126 FAM208BQ5VWN6 2430 aa4.93□□□□□ -1.62
SMAD4-212ENST00000591126 IGLV11-55A0A075B6I3 123 aa4.93□□□□□ -1.62
SMAD4-212ENST00000591126 FAM231BA6NCW3 169 aa4.93□□□□□ -1.62
SMAD4-212ENST00000591126 SCGB1C2P0DMR2 95 aa4.93□□□□□ -1.62
SMAD4-212ENST00000591126 PGLYRP4Q96LB8 373 aa4.93□□□□□ -1.62
SMAD4-212ENST00000591126 CLUHP3Q96NS8 147 aa4.93□□□□□ -1.62
SMAD4-212ENST00000591126 HEATR1Q9H583 2144 aaKnown RBP4.93□□□□□ -1.62
SMAD4-212ENST00000591126 NDUFS6O75380 124 aaKnown RBP4.93□□□□□ -1.62
SMAD4-212ENST00000591126 TCRAP04437 139 aa4.93□□□□□ -1.62
SMAD4-212ENST00000591126 CD28P10747 220 aa4.93□□□□□ -1.62
SMAD4-212ENST00000591126 SPNP16150 400 aa4.93□□□□□ -1.62
SMAD4-212ENST00000591126 BLCAPP62952 87 aa4.93□□□□□ -1.62
SMAD4-212ENST00000591126 SRSF9Q13242 221 aaKnown RBP eCLIP4.93□□□□□ -1.62
SMAD4-212ENST00000591126 MUC21Q5SSG8 566 aa4.93□□□□□ -1.62
SMAD4-212ENST00000591126 MRPL54Q6P161 138 aaKnown RBP4.93□□□□□ -1.62
SMAD4-212ENST00000591126 ZNF705AQ6ZN79 300 aaPredicted RBP4.93□□□□□ -1.62
SMAD4-212ENST00000591126 TRAV3A0A0B4J244 114 aa4.93□□□□□ -1.62
SMAD4-212ENST00000591126 HOXA5P20719 270 aa4.93□□□□□ -1.62
SMAD4-212ENST00000591126 NDPQ00604 133 aa4.93□□□□□ -1.62
SMAD4-212ENST00000591126 TMEM243Q9BU79 118 aa4.93□□□□□ -1.62
SMAD4-212ENST00000591126 C1orf43Q9BWL3 253 aa4.93□□□□□ -1.62
SMAD4-212ENST00000591126 MS4A6AQ9H2W1 248 aa4.93□□□□□ -1.62
SMAD4-212ENST00000591126 IGHV4OR15-8A0A075B7B6 117 aa4.93□□□□□ -1.62
SMAD4-212ENST00000591126 A0A087WW49 117 aa4.93□□□□□ -1.62
SMAD4-212ENST00000591126 SLURP1P55000 103 aa4.93□□□□□ -1.62
SMAD4-212ENST00000591126 LAIR2Q6ISS4 152 aa4.93□□□□□ -1.62
SMAD4-212ENST00000591126 PTPRQQ9UMZ3 2332 aa4.92□□□□□ -1.62
SMAD4-212ENST00000591126 F8W735 103 aaPredicted RBP4.92□□□□□ -1.62
SMAD4-212ENST00000591126 M0R143 59 aa4.92□□□□□ -1.62
SMAD4-212ENST00000591126 CRXO43186 299 aaPredicted RBP4.92□□□□□ -1.62
SMAD4-212ENST00000591126 MBD3L1Q8WWY6 194 aa4.92□□□□□ -1.62
SMAD4-212ENST00000591126 IGKV3OR2-268A0A0C4DH90 116 aa4.92□□□□□ -1.62
SMAD4-212ENST00000591126 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.92□□□□□ -1.62
SMAD4-212ENST00000591126 CGB7P0DN87 165 aa4.92□□□□□ -1.62
SMAD4-212ENST00000591126 ZGRF1Q86YA3 2104 aa4.92□□□□□ -1.62
SMAD4-212ENST00000591126 TMEM37Q8WXS4 190 aa4.92□□□□□ -1.62
SMAD4-212ENST00000591126 SCGB3A1Q96QR1 104 aa4.92□□□□□ -1.62
SMAD4-212ENST00000591126 GFRA4Q9GZZ7 299 aa4.92□□□□□ -1.62
SMAD4-212ENST00000591126 TRAV1-1A0A0B4J248 108 aa4.92□□□□□ -1.62
SMAD4-212ENST00000591126 BRI3O95415 125 aa4.92□□□□□ -1.62
SMAD4-212ENST00000591126 IGKV1-5P01602 117 aa4.92□□□□□ -1.62
SMAD4-212ENST00000591126 SCRT1Q9BWW7 348 aa4.92□□□□□ -1.62
SMAD4-212ENST00000591126 IGHV3OR16-8A0A075B7F1 116 aa4.92□□□□□ -1.62
SMAD4-212ENST00000591126 IGHV1-24A0A0C4DH33 117 aa4.92□□□□□ -1.62
SMAD4-212ENST00000591126 IZUMO1RA6ND01 250 aa4.92□□□□□ -1.62
SMAD4-212ENST00000591126 TCL1AP56279 114 aa4.92□□□□□ -1.62
SMAD4-212ENST00000591126 TMEM136Q6ZRR5 245 aa4.92□□□□□ -1.62
SMAD4-212ENST00000591126 SFRP2Q96HF1 295 aa4.92□□□□□ -1.62
SMAD4-212ENST00000591126 PMCHL2Q9BQD1 86 aa4.92□□□□□ -1.62
SMAD4-212ENST00000591126 H3BQ15 152 aa4.91□□□□□ -1.62
SMAD4-212ENST00000591126 CSN3P07498 182 aa4.91□□□□□ -1.62
SMAD4-212ENST00000591126 IMMP2LQ96T52 175 aa4.91□□□□□ -1.62
SMAD4-212ENST00000591126 BRCA2P51587 3418 aa4.91□□□□□ -1.62
SMAD4-212ENST00000591126 DOCK9Q9BZ29 2069 aa4.91□□□□□ -1.62
SMAD4-212ENST00000591126 A0A0C4DFX4 3053 aa4.91□□□□□ -1.62
SMAD4-212ENST00000591126 ZNF876PQ49A33 203 aa4.91□□□□□ -1.62
SMAD4-212ENST00000591126 NEGR1Q7Z3B1 354 aa4.91□□□□□ -1.62
SMAD4-212ENST00000591126 BCL6BQ8N143 479 aaPredicted RBP4.91□□□□□ -1.62
SMAD4-212ENST00000591126 C1orf159Q96HA4 380 aa4.91□□□□□ -1.62
SMAD4-212ENST00000591126 LINC00479Q96M42 142 aa4.91□□□□□ -1.62
SMAD4-212ENST00000591126 U3KQK5 164 aa4.91□□□□□ -1.62
SMAD4-212ENST00000591126 ICE1Q9Y2F5 2266 aa4.91□□□□□ -1.62
SMAD4-212ENST00000591126 TP53BP1Q12888 1972 aaPredicted RBP4.91□□□□□ -1.62
SMAD4-212ENST00000591126 TRBV19A0A075B6N1 114 aa4.91□□□□□ -1.62
SMAD4-212ENST00000591126 GAGE12BA1L429 117 aa4.91□□□□□ -1.62
SMAD4-212ENST00000591126 F8WEM9 126 aa4.91□□□□□ -1.62
SMAD4-212ENST00000591126 GAGE7O76087 117 aa4.91□□□□□ -1.62
SMAD4-212ENST00000591126 IGLC1P0CG04 106 aa4.91□□□□□ -1.62
SMAD4-212ENST00000591126 GAGE12FP0CL80 117 aa4.91□□□□□ -1.62
SMAD4-212ENST00000591126 GAGE12GP0CL81 117 aa4.91□□□□□ -1.62
SMAD4-212ENST00000591126 GAGE12IP0CL82 117 aa4.91□□□□□ -1.62
SMAD4-212ENST00000591126 ODF3L1Q8IXM7 274 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms