RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 SSSCA1O60232 199 aa9.38□□□□□ -0.91
CLPTM1-208ENST00000588274 OPCMLQ14982 345 aa9.38□□□□□ -0.91
CLPTM1-208ENST00000588274 LINC00305Q7Z4B0 112 aa9.38□□□□□ -0.91
CLPTM1-208ENST00000588274 RAB2BQ8WUD1 216 aa9.38□□□□□ -0.91
CLPTM1-208ENST00000588274 SMIM8Q96KF7 97 aa9.38□□□□□ -0.91
CLPTM1-208ENST00000588274 FAM19A4Q96LR4 140 aa9.38□□□□□ -0.91
CLPTM1-208ENST00000588274 SLC25A21Q9BQT8 299 aaPredicted RBP9.38□□□□□ -0.91
CLPTM1-208ENST00000588274 PYGO2Q9BRQ0 406 aa9.38□□□□□ -0.91
CLPTM1-208ENST00000588274 PSENENQ9NZ42 101 aa9.38□□□□□ -0.91
CLPTM1-208ENST00000588274 A0A087WTM6 91 aa9.37□□□□□ -0.91
CLPTM1-208ENST00000588274 TRAV12-3A0A0B4J271 114 aa9.37□□□□□ -0.91
CLPTM1-208ENST00000588274 FABP12A6NFH5 140 aa9.37□□□□□ -0.91
CLPTM1-208ENST00000588274 SNURFLB1AK76 121 aa9.37□□□□□ -0.91
CLPTM1-208ENST00000588274 NXPH4O95158 308 aa9.37□□□□□ -0.91
CLPTM1-208ENST00000588274 METTL15P1P0C7V9 234 aa9.37□□□□□ -0.91
CLPTM1-208ENST00000588274 FAUP35544 74 aaKnown RBP9.37□□□□□ -0.91
CLPTM1-208ENST00000588274 CCDC190Q86UF4 302 aa9.37□□□□□ -0.91
CLPTM1-208ENST00000588274 CCDC28AQ8IWP9 274 aa9.37□□□□□ -0.91
CLPTM1-208ENST00000588274 LRRC20Q8TCA0 184 aa9.37□□□□□ -0.91
CLPTM1-208ENST00000588274 MGST2Q99735 147 aa9.37□□□□□ -0.91
CLPTM1-208ENST00000588274 LINC00467Q9BRT7 94 aa9.37□□□□□ -0.91
CLPTM1-208ENST00000588274 MRPS26Q9BYN8 205 aaKnown RBP9.37□□□□□ -0.91
CLPTM1-208ENST00000588274 GSN-AS1Q9NRJ2 163 aa9.37□□□□□ -0.91
CLPTM1-208ENST00000588274 RCL1Q9Y2P8 373 aaKnown RBP9.37□□□□□ -0.91
CLPTM1-208ENST00000588274 C9orf170A2RU37 121 aa9.36□□□□□ -0.91
CLPTM1-208ENST00000588274 KLLNB2CW77 178 aa9.36□□□□□ -0.91
CLPTM1-208ENST00000588274 J3KRW8 73 aa9.36□□□□□ -0.91
CLPTM1-208ENST00000588274 AGPAT2O15120 278 aa9.36□□□□□ -0.91
CLPTM1-208ENST00000588274 ZNF324O75467 553 aaPredicted RBP9.36□□□□□ -0.91
CLPTM1-208ENST00000588274 ERVFC1-1P60608 527 aa9.36□□□□□ -0.91
CLPTM1-208ENST00000588274 PXDC1Q5TGL8 231 aa9.36□□□□□ -0.91
CLPTM1-208ENST00000588274 ZNF546Q86UE3 836 aa9.36□□□□□ -0.91
CLPTM1-208ENST00000588274 TOMM5Q8N4H5 51 aa9.36□□□□□ -0.91
CLPTM1-208ENST00000588274 BCL7BQ9BQE9 202 aa9.36□□□□□ -0.91
CLPTM1-208ENST00000588274 NPVFQ9HCQ7 196 aa9.36□□□□□ -0.91
CLPTM1-208ENST00000588274 H3BMQ9 156 aa9.35□□□□□ -0.91
CLPTM1-208ENST00000588274 SPINK4O60575 86 aa9.35□□□□□ -0.91
CLPTM1-208ENST00000588274 ANXA7P20073 488 aaKnown RBP9.35□□□□□ -0.91
CLPTM1-208ENST00000588274 LEPP41159 167 aa9.35□□□□□ -0.91
CLPTM1-208ENST00000588274 TMBIM6P55061 237 aa9.35□□□□□ -0.91
CLPTM1-208ENST00000588274 BPIFA4PQ86YQ2 179 aa9.35□□□□□ -0.91
CLPTM1-208ENST00000588274 DEDD2Q8WXF8 326 aa9.35□□□□□ -0.91
CLPTM1-208ENST00000588274 UBR4Q5T4S7 5183 aa9.35□□□□□ -0.91
CLPTM1-208ENST00000588274 TSC22D2O75157 780 aa9.34□□□□□ -0.91
CLPTM1-208ENST00000588274 TCL1AP56279 114 aa9.34□□□□□ -0.91
CLPTM1-208ENST00000588274 AP3S2P59780 193 aa9.34□□□□□ -0.91
CLPTM1-208ENST00000588274 UBE2MP61081 183 aaKnown RBP9.34□□□□□ -0.91
CLPTM1-208ENST00000588274 CD300CQ08708 224 aa9.34□□□□□ -0.91
CLPTM1-208ENST00000588274 BTN1A1Q13410 526 aa9.34□□□□□ -0.91
CLPTM1-208ENST00000588274 ANXA2RQ3ZCQ2 193 aa9.34□□□□□ -0.91
CLPTM1-208ENST00000588274 PRR9Q5T870 116 aa9.34□□□□□ -0.91
CLPTM1-208ENST00000588274 Q6ZQT7 251 aa9.34□□□□□ -0.91
CLPTM1-208ENST00000588274 MCFD2Q8NI22 146 aa9.34□□□□□ -0.91
CLPTM1-208ENST00000588274 FRZBQ92765 325 aa9.34□□□□□ -0.91
CLPTM1-208ENST00000588274 FUT9Q9Y231 359 aa9.34□□□□□ -0.91
CLPTM1-208ENST00000588274 KLF12Q9Y4X4 402 aa9.34□□□□□ -0.91
CLPTM1-208ENST00000588274 PXMP4Q9Y6I8 212 aa9.34□□□□□ -0.91
CLPTM1-208ENST00000588274 TRGV2A0A075B6R0 118 aa9.33□□□□□ -0.92
CLPTM1-208ENST00000588274 TRAV5A0A0B4J249 113 aa9.33□□□□□ -0.92
CLPTM1-208ENST00000588274 C7orf71A4D174 169 aa9.33□□□□□ -0.92
CLPTM1-208ENST00000588274 M0R3E3 92 aa9.33□□□□□ -0.92
CLPTM1-208ENST00000588274 TAS2R30P59541 319 aa9.33□□□□□ -0.92
CLPTM1-208ENST00000588274 HAMPP81172 84 aa9.33□□□□□ -0.92
CLPTM1-208ENST00000588274 ICAM4Q14773 271 aa9.33□□□□□ -0.92
CLPTM1-208ENST00000588274 S100A7AQ86SG5 101 aa9.33□□□□□ -0.92
CLPTM1-208ENST00000588274 ZNF680Q8NEM1 530 aa9.33□□□□□ -0.92
CLPTM1-208ENST00000588274 OR10P1Q8NGE3 313 aa9.33□□□□□ -0.92
CLPTM1-208ENST00000588274 ST6GAL2Q96JF0 529 aa9.33□□□□□ -0.92
CLPTM1-208ENST00000588274 MDFICQ9P1T7 246 aa9.33□□□□□ -0.92
CLPTM1-208ENST00000588274 RNF24Q9Y225 148 aa9.33□□□□□ -0.92
CLPTM1-208ENST00000588274 TRGV1A0A0A0MS02 117 aa9.32□□□□□ -0.92
CLPTM1-208ENST00000588274 C7orf66A4D0T2 115 aa9.32□□□□□ -0.92
CLPTM1-208ENST00000588274 GOSR2O14653 212 aa9.32□□□□□ -0.92
CLPTM1-208ENST00000588274 COX7A2P2O60397 106 aa9.32□□□□□ -0.92
CLPTM1-208ENST00000588274 ZNF253O75346 499 aa9.32□□□□□ -0.92
CLPTM1-208ENST00000588274 NDUFB4O95168 129 aa9.32□□□□□ -0.92
CLPTM1-208ENST00000588274 SMR3BP02814 79 aaPredicted RBP9.32□□□□□ -0.92
CLPTM1-208ENST00000588274 SLC25A5P05141 298 aaKnown RBP9.32□□□□□ -0.92
CLPTM1-208ENST00000588274 ERCC8Q13216 396 aa9.32□□□□□ -0.92
CLPTM1-208ENST00000588274 LYPD5Q6UWN5 251 aa9.32□□□□□ -0.92
CLPTM1-208ENST00000588274 MRPL53Q96EL3 112 aaKnown RBP9.32□□□□□ -0.92
CLPTM1-208ENST00000588274 GGACTQ9BVM4 153 aa9.32□□□□□ -0.92
CLPTM1-208ENST00000588274 MGAT4CQ9UBM8 478 aa9.32□□□□□ -0.92
CLPTM1-208ENST00000588274 TP53TG3Q9ULZ0 132 aa9.32□□□□□ -0.92
CLPTM1-208ENST00000588274 FLVCR2Q9UPI3 526 aa9.32□□□□□ -0.92
CLPTM1-208ENST00000588274 ICOSQ9Y6W8 199 aa9.32□□□□□ -0.92
CLPTM1-208ENST00000588274 NDUFB6O95139 128 aa9.31□□□□□ -0.92
CLPTM1-208ENST00000588274 OR4E1P0C645 316 aa9.31□□□□□ -0.92
CLPTM1-208ENST00000588274 CRISP2P16562 243 aa9.31□□□□□ -0.92
CLPTM1-208ENST00000588274 BTCP35070 178 aa9.31□□□□□ -0.92
CLPTM1-208ENST00000588274 CRYBA4P53673 196 aa9.31□□□□□ -0.92
CLPTM1-208ENST00000588274 FHL2Q14192 279 aa9.31□□□□□ -0.92
CLPTM1-208ENST00000588274 PYDC2Q56P42 97 aa9.31□□□□□ -0.92
CLPTM1-208ENST00000588274 IBA57Q5T440 356 aaKnown RBP9.31□□□□□ -0.92
CLPTM1-208ENST00000588274 C10orf113Q5VZT2 155 aa9.31□□□□□ -0.92
CLPTM1-208ENST00000588274 WFDC10BQ8IUB3 73 aa9.31□□□□□ -0.92
CLPTM1-208ENST00000588274 ZFAND2AQ8N6M9 145 aa9.31□□□□□ -0.92
CLPTM1-208ENST00000588274 VGLL1Q99990 258 aa9.31□□□□□ -0.92
CLPTM1-208ENST00000588274 C11orf1Q9H5F2 150 aa9.31□□□□□ -0.92
CLPTM1-208ENST00000588274 PTTG2Q9NZH5 202 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms