RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 I3L2K1 104 aa2.74□□□□□ -1.97
VMP1-205ENST00000587470 ADAP1O75689 374 aa2.74□□□□□ -1.97
VMP1-205ENST00000587470 ATG12O94817 140 aa2.74□□□□□ -1.97
VMP1-205ENST00000587470 HLA-AP01891 365 aaKnown RBP2.74□□□□□ -1.97
VMP1-205ENST00000587470 HSPB1P04792 205 aaKnown RBP2.74□□□□□ -1.97
VMP1-205ENST00000587470 IL5P05113 134 aa2.74□□□□□ -1.97
VMP1-205ENST00000587470 OR4E1P0C645 316 aa2.74□□□□□ -1.97
VMP1-205ENST00000587470 SULT1A3P0DMM9 295 aa2.74□□□□□ -1.97
VMP1-205ENST00000587470 SULT1A4P0DMN0 295 aa2.74□□□□□ -1.97
VMP1-205ENST00000587470 RNASE2P10153 161 aaKnown RBP2.74□□□□□ -1.97
VMP1-205ENST00000587470 SLC25A6P12236 298 aa2.74□□□□□ -1.97
VMP1-205ENST00000587470 IGLL1P15814 213 aa2.74□□□□□ -1.97
VMP1-205ENST00000587470 SPNP16150 400 aa2.74□□□□□ -1.97
VMP1-205ENST00000587470 INPP1P49441 399 aa2.74□□□□□ -1.97
VMP1-205ENST00000587470 AKR1C2P52895 323 aa2.74□□□□□ -1.97
VMP1-205ENST00000587470 SPCS3P61009 180 aa2.74□□□□□ -1.97
VMP1-205ENST00000587470 ATP5G2Q06055 141 aa2.74□□□□□ -1.97
VMP1-205ENST00000587470 TNFRSF9Q07011 255 aa2.74□□□□□ -1.97
VMP1-205ENST00000587470 ZNF616Q08AN1 781 aa2.74□□□□□ -1.97
VMP1-205ENST00000587470 IL15RAQ13261 267 aa2.74□□□□□ -1.97
VMP1-205ENST00000587470 OXA1LQ15070 435 aa2.74□□□□□ -1.97
VMP1-205ENST00000587470 SPINK9Q5DT21 86 aa2.74□□□□□ -1.97
VMP1-205ENST00000587470 THOC7Q6I9Y2 204 aaKnown RBP2.74□□□□□ -1.97
VMP1-205ENST00000587470 HSD17B13Q7Z5P4 300 aaPredicted RBP2.74□□□□□ -1.97
VMP1-205ENST00000587470 LYG2Q86SG7 212 aa2.74□□□□□ -1.97
VMP1-205ENST00000587470 FAM223AQ8IWN6 122 aa2.74□□□□□ -1.97
VMP1-205ENST00000587470 LGI3Q8N145 548 aa2.74□□□□□ -1.97
VMP1-205ENST00000587470 OR11H1Q8NG94 326 aa2.74□□□□□ -1.97
VMP1-205ENST00000587470 OR1P1Q8NH06 330 aa2.74□□□□□ -1.97
VMP1-205ENST00000587470 ZNF502Q8TBZ5 544 aa2.74□□□□□ -1.97
VMP1-205ENST00000587470 MITD1Q8WV92 249 aa2.74□□□□□ -1.97
VMP1-205ENST00000587470 DCUN1D4Q92564 292 aa2.74□□□□□ -1.97
VMP1-205ENST00000587470 PHB2Q99623 299 aa2.74□□□□□ -1.97
VMP1-205ENST00000587470 MARVELD1Q9BSK0 173 aa2.74□□□□□ -1.97
VMP1-205ENST00000587470 HINT2Q9BX68 163 aa2.74□□□□□ -1.97
VMP1-205ENST00000587470 C20orf85Q9H1P6 137 aa2.74□□□□□ -1.97
VMP1-205ENST00000587470 ZNF355PQ9NSJ1 428 aa2.74□□□□□ -1.97
VMP1-205ENST00000587470 MRPL36Q9P0J6 103 aaKnown RBP2.74□□□□□ -1.97
VMP1-205ENST00000587470 PEF1Q9UBV8 284 aaKnown RBP2.74□□□□□ -1.97
VMP1-205ENST00000587470 F11RQ9Y624 299 aaKnown RBP2.74□□□□□ -1.97
VMP1-205ENST00000587470 TRAV6A0A075B6T7 132 aa2.73□□□□□ -1.97
VMP1-205ENST00000587470 IGHV3-35A0A0C4DH35 117 aa2.73□□□□□ -1.97
VMP1-205ENST00000587470 SMCO3A2RU48 225 aa2.73□□□□□ -1.97
VMP1-205ENST00000587470 LINC01619G3V211 115 aa2.73□□□□□ -1.97
VMP1-205ENST00000587470 IFNA17P01571 189 aa2.73□□□□□ -1.97
VMP1-205ENST00000587470 IGHV3-48P01763 117 aa2.73□□□□□ -1.97
VMP1-205ENST00000587470 IGHV3-23P01764 117 aa2.73□□□□□ -1.97
VMP1-205ENST00000587470 CTSGP08311 255 aa2.73□□□□□ -1.97
VMP1-205ENST00000587470 OR8U8P0C7N1 319 aa2.73□□□□□ -1.97
VMP1-205ENST00000587470 DEFA4P12838 97 aa2.73□□□□□ -1.97
VMP1-205ENST00000587470 HIST1H1BP16401 226 aaKnown RBP2.73□□□□□ -1.97
VMP1-205ENST00000587470 RAB25P57735 213 aa2.73□□□□□ -1.97
VMP1-205ENST00000587470 ERHP84090 104 aaKnown RBP2.73□□□□□ -1.97
VMP1-205ENST00000587470 EGFEM1PQ0D2K5 195 aa2.73□□□□□ -1.97
VMP1-205ENST00000587470 OR5I1Q13606 314 aa2.73□□□□□ -1.97
VMP1-205ENST00000587470 SMCO1Q147U7 214 aa2.73□□□□□ -1.97
VMP1-205ENST00000587470 C2orf66Q6UXQ4 117 aa2.73□□□□□ -1.97
VMP1-205ENST00000587470 CLEC19AQ6UXS0 136 aa2.73□□□□□ -1.97
VMP1-205ENST00000587470 GPHB5Q86YW7 130 aa2.73□□□□□ -1.97
VMP1-205ENST00000587470 BPIFCQ8NFQ6 507 aa2.73□□□□□ -1.97
VMP1-205ENST00000587470 ZNF431Q8TF32 576 aaPredicted RBP2.73□□□□□ -1.97
VMP1-205ENST00000587470 OR10C1Q96KK4 312 aa2.73□□□□□ -1.97
VMP1-205ENST00000587470 SEC22CQ9BRL7 303 aa2.73□□□□□ -1.97
VMP1-205ENST00000587470 C20orf24Q9BUV8 137 aa2.73□□□□□ -1.97
VMP1-205ENST00000587470 RNF126Q9BV68 326 aa2.73□□□□□ -1.97
VMP1-205ENST00000587470 LCE3DQ9BYE3 92 aa2.73□□□□□ -1.97
VMP1-205ENST00000587470 C11orf1Q9H5F2 150 aa2.73□□□□□ -1.97
VMP1-205ENST00000587470 S4R3C0 116 aa2.73□□□□□ -1.97
VMP1-205ENST00000587470 DNAH9Q9NYC9 4486 aa2.73□□□□□ -1.97
VMP1-205ENST00000587470 CSMD3Q7Z407 3707 aa2.72□□□□□ -1.97
VMP1-205ENST00000587470 TRBV7-1A0A0A6YYK4 115 aa2.72□□□□□ -1.97
VMP1-205ENST00000587470 IGHV3-21A0A0B4J1V1 117 aa2.72□□□□□ -1.97
VMP1-205ENST00000587470 TRAV25A0A0B4J276 109 aa2.72□□□□□ -1.97
VMP1-205ENST00000587470 PIGBOS1A0A0B4J2F0 54 aa2.72□□□□□ -1.97
VMP1-205ENST00000587470 TMEM213A2RRL7 107 aa2.72□□□□□ -1.97
VMP1-205ENST00000587470 C7orf66A4D0T2 115 aa2.72□□□□□ -1.97
VMP1-205ENST00000587470 SNRPGP15A8MWD9 76 aa2.72□□□□□ -1.97
VMP1-205ENST00000587470 PPP5D1E7EU14 171 aa2.72□□□□□ -1.97
VMP1-205ENST00000587470 INMT-MINDY4F8WBC2 141 aa2.72□□□□□ -1.97
VMP1-205ENST00000587470 LGALS9O00182 355 aa2.72□□□□□ -1.97
VMP1-205ENST00000587470 OVOL1O14753 267 aa2.72□□□□□ -1.97
VMP1-205ENST00000587470 GGCTO75223 188 aaKnown RBP2.72□□□□□ -1.97
VMP1-205ENST00000587470 DUSP14O95147 198 aaKnown RBP2.72□□□□□ -1.97
VMP1-205ENST00000587470 DHFRP00374 187 aa2.72□□□□□ -1.97
VMP1-205ENST00000587470 MT-CO2P00403 227 aa2.72□□□□□ -1.97
VMP1-205ENST00000587470 IGKV1-17P01599 117 aa2.72□□□□□ -1.97
VMP1-205ENST00000587470 C8orf88P0DMB2 117 aa2.72□□□□□ -1.97
VMP1-205ENST00000587470 ZP3P21754 424 aa2.72□□□□□ -1.97
VMP1-205ENST00000587470 HTR2BP41595 481 aa2.72□□□□□ -1.97
VMP1-205ENST00000587470 SYNJ2BPP57105 145 aa2.72□□□□□ -1.97
VMP1-205ENST00000587470 POLR2GP62487 172 aaKnown RBP eCLIP2.72□□□□□ -1.97
VMP1-205ENST00000587470 ZFAND6Q6FIF0 208 aa2.72□□□□□ -1.97
VMP1-205ENST00000587470 UNQ9165/PRO28630Q6UXU0 137 aa2.72□□□□□ -1.97
VMP1-205ENST00000587470 ACOT7LQ6ZUV0 252 aa2.72□□□□□ -1.97
VMP1-205ENST00000587470 C12orf45Q8N5I9 185 aaPredicted RBP2.72□□□□□ -1.97
VMP1-205ENST00000587470 OR9G4Q8NGQ1 327 aa2.72□□□□□ -1.97
VMP1-205ENST00000587470 COQ8AQ8NI60 647 aa2.72□□□□□ -1.97
VMP1-205ENST00000587470 EEF1AKMT3Q96AZ1 226 aa2.72□□□□□ -1.97
VMP1-205ENST00000587470 ZNF436Q9C0F3 470 aaPredicted RBP2.72□□□□□ -1.97
VMP1-205ENST00000587470 RBKSQ9H477 322 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms