RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 PFN1P07737 140 aaKnown RBP7.16□□□□□ -1.26
SS18-220ENST00000582092 TMEM95Q3KNT9 176 aa7.16□□□□□ -1.26
SS18-220ENST00000582092 SIGLEC15Q6ZMC9 328 aa7.16□□□□□ -1.26
SS18-220ENST00000582092 C1QL4Q86Z23 238 aa7.16□□□□□ -1.26
SS18-220ENST00000582092 ARL6IP6Q8N6S5 226 aa7.16□□□□□ -1.26
SS18-220ENST00000582092 TMEM75Q8N9X5 138 aa7.16□□□□□ -1.26
SS18-220ENST00000582092 IGF2BP2-AS1Q96M15 143 aa7.16□□□□□ -1.26
SS18-220ENST00000582092 C17orf77Q96MU5 243 aa7.16□□□□□ -1.26
SS18-220ENST00000582092 SRD5A3Q9H8P0 318 aa7.16□□□□□ -1.26
SS18-220ENST00000582092 UFC1Q9Y3C8 167 aa7.16□□□□□ -1.26
SS18-220ENST00000582092 KLF12Q9Y4X4 402 aa7.16□□□□□ -1.26
SS18-220ENST00000582092 STAB1Q9NY15 2570 aa7.15□□□□□ -1.26
SS18-220ENST00000582092 A0A087X0K7 114 aa7.15□□□□□ -1.26
SS18-220ENST00000582092 DIRC3C9JPN6 131 aa7.15□□□□□ -1.26
SS18-220ENST00000582092 SLC17A3O00476 420 aa7.15□□□□□ -1.26
SS18-220ENST00000582092 PSG3Q16557 428 aa7.15□□□□□ -1.26
SS18-220ENST00000582092 COX19Q49B96 90 aa7.15□□□□□ -1.26
SS18-220ENST00000582092 KHDC1LQ5JSQ8 128 aa7.15□□□□□ -1.26
SS18-220ENST00000582092 SAPCD1Q5SSQ6 148 aa7.15□□□□□ -1.26
SS18-220ENST00000582092 LCNL1Q6ZST4 164 aa7.15□□□□□ -1.26
SS18-220ENST00000582092 GBGT1Q8N5D6 347 aa7.15□□□□□ -1.26
SS18-220ENST00000582092 FRZBQ92765 325 aa7.15□□□□□ -1.26
SS18-220ENST00000582092 C16orf92Q96LL3 132 aa7.15□□□□□ -1.26
SS18-220ENST00000582092 RNASE7Q9H1E1 156 aaKnown RBP7.15□□□□□ -1.26
SS18-220ENST00000582092 SAV1Q9H4B6 383 aaPredicted RBP7.15□□□□□ -1.26
SS18-220ENST00000582092 PSG8Q9UQ74 426 aa7.15□□□□□ -1.26
SS18-220ENST00000582092 TRBV6-1A0A0K0K1D8 114 aa7.14□□□□□ -1.27
SS18-220ENST00000582092 LOC105371267A0A1B0GV96 52 aa7.14□□□□□ -1.27
SS18-220ENST00000582092 A8MWL6 223 aa7.14□□□□□ -1.27
SS18-220ENST00000582092 M0QZ24 198 aa7.14□□□□□ -1.27
SS18-220ENST00000582092 MRPS12O15235 138 aaKnown RBP7.14□□□□□ -1.27
SS18-220ENST00000582092 LTAP01374 205 aa7.14□□□□□ -1.27
SS18-220ENST00000582092 TRGC2P03986 189 aa7.14□□□□□ -1.27
SS18-220ENST00000582092 PSMB8P28062 276 aa7.14□□□□□ -1.27
SS18-220ENST00000582092 RAB4BP61018 213 aa7.14□□□□□ -1.27
SS18-220ENST00000582092 CFHR3Q02985 330 aa7.14□□□□□ -1.27
SS18-220ENST00000582092 C16orf54Q6UWD8 224 aa7.14□□□□□ -1.27
SS18-220ENST00000582092 SHISA2Q6UWI4 295 aa7.14□□□□□ -1.27
SS18-220ENST00000582092 FAM231DQ6ZW35 169 aa7.14□□□□□ -1.27
SS18-220ENST00000582092 TMEM183AQ8IXX5 376 aa7.14□□□□□ -1.27
SS18-220ENST00000582092 DPF1Q92782 380 aa7.14□□□□□ -1.27
SS18-220ENST00000582092 YPEL4Q96NS1 127 aa7.14□□□□□ -1.27
SS18-220ENST00000582092 ZNF702PQ9H963 129 aa7.14□□□□□ -1.27
SS18-220ENST00000582092 ZNF331Q9NQX6 463 aaPredicted RBP7.14□□□□□ -1.27
SS18-220ENST00000582092 TRAPPC1Q9Y5R8 145 aa7.14□□□□□ -1.27
SS18-220ENST00000582092 XKRY2A2RUG3 117 aa7.13□□□□□ -1.27
SS18-220ENST00000582092 CLPSL1A2RUU4 121 aa7.13□□□□□ -1.27
SS18-220ENST00000582092 FAM181BA6NEQ2 426 aa7.13□□□□□ -1.27
SS18-220ENST00000582092 K7EMT4 169 aa7.13□□□□□ -1.27
SS18-220ENST00000582092 TRBV12-3P01733 135 aa7.13□□□□□ -1.27
SS18-220ENST00000582092 ID1P41134 155 aa7.13□□□□□ -1.27
SS18-220ENST00000582092 NDUFA6P56556 154 aa7.13□□□□□ -1.27
SS18-220ENST00000582092 SAMD13Q5VXD3 122 aa7.13□□□□□ -1.27
SS18-220ENST00000582092 LCN12Q6JVE5 192 aa7.13□□□□□ -1.27
SS18-220ENST00000582092 WDR73Q6P4I2 378 aa7.13□□□□□ -1.27
SS18-220ENST00000582092 Q86TA4 180 aa7.13□□□□□ -1.27
SS18-220ENST00000582092 GPHB5Q86YW7 130 aa7.13□□□□□ -1.27
SS18-220ENST00000582092 NUDT10Q8NFP7 164 aa7.13□□□□□ -1.27
SS18-220ENST00000582092 OR4B1Q8NGF8 309 aa7.13□□□□□ -1.27
SS18-220ENST00000582092 BORCS7Q96B45 105 aa7.13□□□□□ -1.27
SS18-220ENST00000582092 NUDT11Q96G61 164 aa7.13□□□□□ -1.27
SS18-220ENST00000582092 UBE2E2Q96LR5 201 aa7.13□□□□□ -1.27
SS18-220ENST00000582092 PYGO2Q9BRQ0 406 aa7.13□□□□□ -1.27
SS18-220ENST00000582092 ZNF747Q9BV97 191 aa7.13□□□□□ -1.27
SS18-220ENST00000582092 DAZ1Q9NQZ3 744 aaKnown RBP7.13□□□□□ -1.27
SS18-220ENST00000582092 ZNF492Q9P255 531 aa7.13□□□□□ -1.27
SS18-220ENST00000582092 V9GYV3 84 aa7.13□□□□□ -1.27
SS18-220ENST00000582092 TRAV8-1A0A0A6YYK1 113 aa7.12□□□□□ -1.27
SS18-220ENST00000582092 IGHV7-4-1A0A0J9YVY3 117 aa7.12□□□□□ -1.27
SS18-220ENST00000582092 IZUMO1RA6ND01 250 aa7.12□□□□□ -1.27
SS18-220ENST00000582092 M0R3E3 92 aa7.12□□□□□ -1.27
SS18-220ENST00000582092 CHEK1O14757 476 aa7.12□□□□□ -1.27
SS18-220ENST00000582092 IGLV2-8P01709 118 aa7.12□□□□□ -1.27
SS18-220ENST00000582092 APOHP02749 345 aaPredicted RBP7.12□□□□□ -1.27
SS18-220ENST00000582092 RPLP1P05386 114 aaKnown RBP7.12□□□□□ -1.27
SS18-220ENST00000582092 LGALS1P09382 135 aaKnown RBP7.12□□□□□ -1.27
SS18-220ENST00000582092 AKR1D1P51857 326 aa7.12□□□□□ -1.27
SS18-220ENST00000582092 TCL1AP56279 114 aa7.12□□□□□ -1.27
SS18-220ENST00000582092 SNRPEP62304 92 aaKnown RBP7.12□□□□□ -1.27
SS18-220ENST00000582092 TMEM78Q5T7P6 136 aa7.12□□□□□ -1.27
SS18-220ENST00000582092 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.12□□□□□ -1.27
SS18-220ENST00000582092 KLHDC1Q8N7A1 406 aa7.12□□□□□ -1.27
SS18-220ENST00000582092 RHPN1-AS1Q9BWJ2 59 aa7.12□□□□□ -1.27
SS18-220ENST00000582092 RPP21Q9H633 154 aaKnown RBP7.12□□□□□ -1.27
SS18-220ENST00000582092 NAT8BQ9UHF3 227 aa7.12□□□□□ -1.27
SS18-220ENST00000582092 SMAD5-AS1Q9Y6J3 95 aa7.12□□□□□ -1.27
SS18-220ENST00000582092 U3KQE9 123 aa7.12□□□□□ -1.27
SS18-220ENST00000582092 IGKV2-40A0A087WW87 121 aaPredicted RBP7.11□□□□□ -1.27
SS18-220ENST00000582092 SMIM27A0A1W2PRY6 76 aa7.11□□□□□ -1.27
SS18-220ENST00000582092 RBAKDNA6NC62 111 aa7.11□□□□□ -1.27
SS18-220ENST00000582092 NDUFA7O95182 113 aa7.11□□□□□ -1.27
SS18-220ENST00000582092 IGKV2D-40P01614 121 aaPredicted RBP7.11□□□□□ -1.27
SS18-220ENST00000582092 TYMSP04818 313 aa7.11□□□□□ -1.27
SS18-220ENST00000582092 S100A2P29034 98 aa7.11□□□□□ -1.27
SS18-220ENST00000582092 FABP9Q0Z7S8 132 aa7.11□□□□□ -1.27
SS18-220ENST00000582092 TM4SF20Q53R12 229 aa7.11□□□□□ -1.27
SS18-220ENST00000582092 IGFL4Q6B9Z1 124 aa7.11□□□□□ -1.27
SS18-220ENST00000582092 C8orf86Q6ZUL3 223 aa7.11□□□□□ -1.27
SS18-220ENST00000582092 Q8N2B8 174 aa7.11□□□□□ -1.27
SS18-220ENST00000582092 ZNF738Q8NE65 137 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms