RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 TRANK1O15050 2925 aa1.33□□□□□ -2.2
SMCHD1-205ENST00000581383 CHD6Q8TD26 2715 aa1.33□□□□□ -2.2
SMCHD1-205ENST00000581383 DNAH14Q0VDD8 3507 aa1.33□□□□□ -2.2
SMCHD1-205ENST00000581383 CFAP54Q96N23 3096 aa1.33□□□□□ -2.2
SMCHD1-205ENST00000581383 MAST4O15021 2626 aa1.33□□□□□ -2.2
SMCHD1-205ENST00000581383 hCG_1818297A0A087WSY0 165 aa1.33□□□□□ -2.2
SMCHD1-205ENST00000581383 ARL5CA6NH57 179 aa1.33□□□□□ -2.2
SMCHD1-205ENST00000581383 A8MT66 165 aa1.33□□□□□ -2.2
SMCHD1-205ENST00000581383 TCL1BO95988 128 aa1.33□□□□□ -2.2
SMCHD1-205ENST00000581383 SMIM17P0DL12 118 aa1.33□□□□□ -2.2
SMCHD1-205ENST00000581383 CXCL8P10145 99 aa1.33□□□□□ -2.2
SMCHD1-205ENST00000581383 BRS3P32247 399 aa1.33□□□□□ -2.2
SMCHD1-205ENST00000581383 PPP1R2P41236 205 aa1.33□□□□□ -2.2
SMCHD1-205ENST00000581383 DEFA3P59666 94 aa1.33□□□□□ -2.2
SMCHD1-205ENST00000581383 HIST1H3AP68431 136 aa1.33□□□□□ -2.2
SMCHD1-205ENST00000581383 H3F3AP84243 136 aa1.33□□□□□ -2.2
SMCHD1-205ENST00000581383 PPP1R2P3Q6NXS1 205 aa1.33□□□□□ -2.2
SMCHD1-205ENST00000581383 TRAPPC6BQ86SZ2 158 aa1.33□□□□□ -2.2
SMCHD1-205ENST00000581383 OR51A2Q8NGJ7 313 aa1.33□□□□□ -2.2
SMCHD1-205ENST00000581383 TRABDQ9H4I3 376 aa1.33□□□□□ -2.2
SMCHD1-205ENST00000581383 OSTCQ9NRP0 149 aa1.33□□□□□ -2.2
SMCHD1-205ENST00000581383 ARL2BPQ9Y2Y0 163 aa1.33□□□□□ -2.2
SMCHD1-205ENST00000581383 MCM3APO60318 1980 aa1.33□□□□□ -2.2
SMCHD1-205ENST00000581383 DCHS1Q96JQ0 3298 aa1.33□□□□□ -2.2
SMCHD1-205ENST00000581383 SETXQ7Z333 2677 aaKnown RBP1.33□□□□□ -2.2
SMCHD1-205ENST00000581383 MYH8P13535 1937 aa1.32□□□□□ -2.2
SMCHD1-205ENST00000581383 MYH4Q9Y623 1939 aa1.32□□□□□ -2.2
SMCHD1-205ENST00000581383 C5orf42Q9H799 3197 aa1.32□□□□□ -2.2
SMCHD1-205ENST00000581383 GPR98Q8WXG9 6306 aa1.32□□□□□ -2.2
SMCHD1-205ENST00000581383 PDE6DO43924 150 aa1.32□□□□□ -2.2
SMCHD1-205ENST00000581383 ZNF682O95780 498 aa1.32□□□□□ -2.2
SMCHD1-205ENST00000581383 PLCXD2Q0VAA5 305 aa1.32□□□□□ -2.2
SMCHD1-205ENST00000581383 TMED2Q15363 201 aa1.32□□□□□ -2.2
SMCHD1-205ENST00000581383 LIN52Q52LA3 116 aa1.32□□□□□ -2.2
SMCHD1-205ENST00000581383 LINC01554Q52M75 96 aa1.32□□□□□ -2.2
SMCHD1-205ENST00000581383 AKIRIN2Q53H80 203 aa1.32□□□□□ -2.2
SMCHD1-205ENST00000581383 TEX36Q5VZQ5 186 aa1.32□□□□□ -2.2
SMCHD1-205ENST00000581383 PHF13Q86YI8 300 aaPredicted RBP1.32□□□□□ -2.2
SMCHD1-205ENST00000581383 LINC00311Q8N616 119 aa1.32□□□□□ -2.2
SMCHD1-205ENST00000581383 TET1Q8NFU7 2136 aa1.32□□□□□ -2.2
SMCHD1-205ENST00000581383 OR52L1Q8NGH7 329 aa1.32□□□□□ -2.2
SMCHD1-205ENST00000581383 OR10X1Q8NGY0 326 aa1.32□□□□□ -2.2
SMCHD1-205ENST00000581383 OR4C6Q8NH72 309 aa1.32□□□□□ -2.2
SMCHD1-205ENST00000581383 PAIP2Q9BPZ3 127 aaKnown RBP1.32□□□□□ -2.2
SMCHD1-205ENST00000581383 FAM32AQ9Y421 112 aaKnown RBP1.32□□□□□ -2.2
SMCHD1-205ENST00000581383 SNURFQ9Y675 71 aa1.32□□□□□ -2.2
SMCHD1-205ENST00000581383 TECTAO75443 2155 aa1.32□□□□□ -2.2
SMCHD1-205ENST00000581383 MYH7P12883 1935 aa1.32□□□□□ -2.2
SMCHD1-205ENST00000581383 ATG2AQ2TAZ0 1938 aa1.32□□□□□ -2.2
SMCHD1-205ENST00000581383 FAM186AA6NE01 2351 aa1.32□□□□□ -2.2
SMCHD1-205ENST00000581383 GVINP1Q7Z2Y8 2422 aa1.31□□□□□ -2.2
SMCHD1-205ENST00000581383 ACACBO00763 2458 aa1.31□□□□□ -2.2
SMCHD1-205ENST00000581383 RIF1Q5UIP0 2472 aaKnown RBP1.31□□□□□ -2.2
SMCHD1-205ENST00000581383 SPAARA0A1B0GVQ0 90 aa1.31□□□□□ -2.2
SMCHD1-205ENST00000581383 C2orf70A6NJV1 201 aa1.31□□□□□ -2.2
SMCHD1-205ENST00000581383 FAM159BA6NKW6 160 aa1.31□□□□□ -2.2
SMCHD1-205ENST00000581383 C1orf196B1AJZ1 125 aa1.31□□□□□ -2.2
SMCHD1-205ENST00000581383 CST2P09228 141 aa1.31□□□□□ -2.2
SMCHD1-205ENST00000581383 CASP1P29466 404 aa1.31□□□□□ -2.2
SMCHD1-205ENST00000581383 RNASE10Q5GAN6 216 aaKnown RBP1.31□□□□□ -2.2
SMCHD1-205ENST00000581383 HACD4Q5VWC8 232 aa1.31□□□□□ -2.2
SMCHD1-205ENST00000581383 C12orf45Q8N5I9 185 aaPredicted RBP1.31□□□□□ -2.2
SMCHD1-205ENST00000581383 DEFB124Q8NES8 71 aa1.31□□□□□ -2.2
SMCHD1-205ENST00000581383 GPR146Q96CH1 333 aa1.31□□□□□ -2.2
SMCHD1-205ENST00000581383 CEP19Q96LK0 163 aa1.31□□□□□ -2.2
SMCHD1-205ENST00000581383 PHB2Q99623 299 aa1.31□□□□□ -2.2
SMCHD1-205ENST00000581383 C9orf16Q9BUW7 83 aa1.31□□□□□ -2.2
SMCHD1-205ENST00000581383 KIFC1Q9BW19 673 aa1.31□□□□□ -2.2
SMCHD1-205ENST00000581383 ENY2Q9NPA8 101 aa1.31□□□□□ -2.2
SMCHD1-205ENST00000581383 TAS2R4Q9NYW5 299 aa1.31□□□□□ -2.2
SMCHD1-205ENST00000581383 CACNA1HO95180 2353 aa1.31□□□□□ -2.2
SMCHD1-205ENST00000581383 ASPMQ8IZT6 3477 aa1.31□□□□□ -2.2
SMCHD1-205ENST00000581383 FLNBO75369 2602 aaKnown RBP1.31□□□□□ -2.2
SMCHD1-205ENST00000581383 PLXNA4Q9HCM2 1894 aa1.31□□□□□ -2.2
SMCHD1-205ENST00000581383 VPS13AQ96RL7 3174 aa1.31□□□□□ -2.2
SMCHD1-205ENST00000581383 DMXL1Q9Y485 3027 aa1.3□□□□□ -2.2
SMCHD1-205ENST00000581383 CFAP47Q6ZTR5 3102 aa1.3□□□□□ -2.2
SMCHD1-205ENST00000581383 SPEGQ15772 3267 aa1.3□□□□□ -2.2
SMCHD1-205ENST00000581383 IGKV2D-26A0A0A0MRZ7 120 aa1.3□□□□□ -2.2
SMCHD1-205ENST00000581383 OR2T1O43869 369 aa1.3□□□□□ -2.2
SMCHD1-205ENST00000581383 OR2B3O76000 313 aa1.3□□□□□ -2.2
SMCHD1-205ENST00000581383 OR7C1O76099 320 aaPredicted RBP1.3□□□□□ -2.2
SMCHD1-205ENST00000581383 SERPINE1P05121 402 aa1.3□□□□□ -2.2
SMCHD1-205ENST00000581383 MGST1P10620 155 aaKnown RBP1.3□□□□□ -2.2
SMCHD1-205ENST00000581383 MIFP14174 115 aa1.3□□□□□ -2.2
SMCHD1-205ENST00000581383 PPIBP23284 216 aaKnown RBP1.3□□□□□ -2.2
SMCHD1-205ENST00000581383 SSR2P43308 183 aa1.3□□□□□ -2.2
SMCHD1-205ENST00000581383 SERPINB9P50453 376 aa1.3□□□□□ -2.2
SMCHD1-205ENST00000581383 OOSP2Q86WS3 158 aa1.3□□□□□ -2.2
SMCHD1-205ENST00000581383 SLC25A40Q8TBP6 338 aa1.3□□□□□ -2.2
SMCHD1-205ENST00000581383 BTF3L4Q96K17 158 aa1.3□□□□□ -2.2
SMCHD1-205ENST00000581383 MIXL1Q9H2W2 232 aa1.3□□□□□ -2.2
SMCHD1-205ENST00000581383 NMNAT1Q9HAN9 279 aaPredicted RBP1.3□□□□□ -2.2
SMCHD1-205ENST00000581383 PTPRZ1P23471 2315 aaPredicted RBP1.3□□□□□ -2.2
SMCHD1-205ENST00000581383 MAP1BP46821 2468 aaKnown RBP1.3□□□□□ -2.2
SMCHD1-205ENST00000581383 DNHD1Q96M86 4753 aa1.3□□□□□ -2.2
SMCHD1-205ENST00000581383 EXPH5Q8NEV8 1989 aa1.3□□□□□ -2.2
SMCHD1-205ENST00000581383 FRYQ5TBA9 3013 aa1.29□□□□□ -2.2
SMCHD1-205ENST00000581383 TRIOO75962 3097 aa1.29□□□□□ -2.2
SMCHD1-205ENST00000581383 OR1I1O60431 355 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms