RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 PSG3Q16557 428 aa11.3□□□□□ -0.6
CDK5RAP3-218ENST00000580391 TCTEX1D4Q5JR98 221 aa11.3□□□□□ -0.6
CDK5RAP3-218ENST00000580391 HIST2H2BDQ6DRA6 164 aa11.3□□□□□ -0.6
CDK5RAP3-218ENST00000580391 KCNIP4Q6PIL6 250 aa11.3□□□□□ -0.6
CDK5RAP3-218ENST00000580391 GPHB5Q86YW7 130 aa11.3□□□□□ -0.6
CDK5RAP3-218ENST00000580391 SMIM12Q96EX1 92 aa11.3□□□□□ -0.6
CDK5RAP3-218ENST00000580391 SLC50A1Q9BRV3 221 aa11.3□□□□□ -0.6
CDK5RAP3-218ENST00000580391 SELENOKQ9Y6D0 94 aa11.3□□□□□ -0.6
CDK5RAP3-218ENST00000580391 TRAV8-2A0A0B4J237 113 aa11.3□□□□□ -0.6
CDK5RAP3-218ENST00000580391 K7EQM0 130 aa11.3□□□□□ -0.6
CDK5RAP3-218ENST00000580391 RNASE1P07998 156 aaKnown RBP11.3□□□□□ -0.6
CDK5RAP3-218ENST00000580391 FAM106AQ4KMX7 169 aa11.3□□□□□ -0.6
CDK5RAP3-218ENST00000580391 IL36BQ9NZH7 164 aa11.3□□□□□ -0.6
CDK5RAP3-218ENST00000580391 PSG8Q9UQ74 426 aa11.3□□□□□ -0.6
CDK5RAP3-218ENST00000580391 NSD1Q96L73 2696 aaPredicted RBP11.29□□□□□ -0.6
CDK5RAP3-218ENST00000580391 FLNBO75369 2602 aaKnown RBP11.29□□□□□ -0.6
CDK5RAP3-218ENST00000580391 TRBV6-1A0A0K0K1D8 114 aa11.29□□□□□ -0.6
CDK5RAP3-218ENST00000580391 C1orf196B1AJZ1 125 aa11.29□□□□□ -0.6
CDK5RAP3-218ENST00000580391 DEFB136Q30KP8 78 aa11.29□□□□□ -0.6
CDK5RAP3-218ENST00000580391 LINC00322Q6ZN03 302 aaPredicted RBP11.29□□□□□ -0.6
CDK5RAP3-218ENST00000580391 IMMP2LQ96T52 175 aa11.29□□□□□ -0.6
CDK5RAP3-218ENST00000580391 HIVEP1P15822 2718 aa11.28□□□□□ -0.6
CDK5RAP3-218ENST00000580391 CA1P00915 261 aaPredicted RBP11.28□□□□□ -0.6
CDK5RAP3-218ENST00000580391 KHDC1LQ5JSQ8 128 aa11.28□□□□□ -0.6
CDK5RAP3-218ENST00000580391 FAM231DQ6ZW35 169 aa11.28□□□□□ -0.6
CDK5RAP3-218ENST00000580391 TMEM183AQ8IXX5 376 aa11.28□□□□□ -0.6
CDK5RAP3-218ENST00000580391 NUDT10Q8NFP7 164 aa11.28□□□□□ -0.6
CDK5RAP3-218ENST00000580391 ZNF418Q8TF45 676 aaPredicted RBP11.28□□□□□ -0.6
CDK5RAP3-218ENST00000580391 NUDT11Q96G61 164 aa11.28□□□□□ -0.6
CDK5RAP3-218ENST00000580391 GRAMD2BQ96HH9 432 aa11.28□□□□□ -0.6
CDK5RAP3-218ENST00000580391 RHPN1-AS1Q9BWJ2 59 aa11.28□□□□□ -0.6
CDK5RAP3-218ENST00000580391 A0A1W2PS18 150 aa11.28□□□□□ -0.6
CDK5RAP3-218ENST00000580391 ZNF705GA8MUZ8 300 aaPredicted RBP11.28□□□□□ -0.6
CDK5RAP3-218ENST00000580391 PRAC2D3DTV9 90 aa11.28□□□□□ -0.6
CDK5RAP3-218ENST00000580391 HILS1P60008 231 aa11.28□□□□□ -0.6
CDK5RAP3-218ENST00000580391 CTAG1AP78358 180 aa11.28□□□□□ -0.6
CDK5RAP3-218ENST00000580391 FOXL1Q12952 345 aa11.28□□□□□ -0.6
CDK5RAP3-218ENST00000580391 LCN12Q6JVE5 192 aa11.28□□□□□ -0.6
CDK5RAP3-218ENST00000580391 ZMAT5Q9UDW3 170 aaKnown RBP11.28□□□□□ -0.6
CDK5RAP3-218ENST00000580391 SMPXQ9UHP9 88 aa11.28□□□□□ -0.6
CDK5RAP3-218ENST00000580391 SERTM2A0A1B0GWG4 89 aa11.27□□□□□ -0.61
CDK5RAP3-218ENST00000580391 TMEM213A2RRL7 107 aa11.27□□□□□ -0.61
CDK5RAP3-218ENST00000580391 K7EMT4 169 aa11.27□□□□□ -0.61
CDK5RAP3-218ENST00000580391 HOXD3P31249 432 aaPredicted RBP11.27□□□□□ -0.61
CDK5RAP3-218ENST00000580391 MEOX2P50222 304 aa11.27□□□□□ -0.61
CDK5RAP3-218ENST00000580391 RAB5BP61020 215 aa11.27□□□□□ -0.61
CDK5RAP3-218ENST00000580391 VGLL1Q99990 258 aa11.27□□□□□ -0.61
CDK5RAP3-218ENST00000580391 SETD2Q9BYW2 2564 aaPredicted RBP11.27□□□□□ -0.61
CDK5RAP3-218ENST00000580391 GATCO43716 136 aaKnown RBP11.27□□□□□ -0.61
CDK5RAP3-218ENST00000580391 TCL1AP56279 114 aa11.27□□□□□ -0.61
CDK5RAP3-218ENST00000580391 SYNJ2BPP57105 145 aa11.27□□□□□ -0.61
CDK5RAP3-218ENST00000580391 ARL6IP6Q8N6S5 226 aa11.27□□□□□ -0.61
CDK5RAP3-218ENST00000580391 Q8TAT8 98 aa11.27□□□□□ -0.61
CDK5RAP3-218ENST00000580391 WIPF2Q8TF74 440 aaPredicted RBP11.27□□□□□ -0.61
CDK5RAP3-218ENST00000580391 ZC2HC1AQ96GY0 325 aa11.27□□□□□ -0.61
CDK5RAP3-218ENST00000580391 C8orf49Q96NF6 230 aa11.27□□□□□ -0.61
CDK5RAP3-218ENST00000580391 UFC1Q9Y3C8 167 aa11.27□□□□□ -0.61
CDK5RAP3-218ENST00000580391 IGKV3-7A0A075B6H7 116 aa11.26□□□□□ -0.61
CDK5RAP3-218ENST00000580391 C19orf71A6NCJ1 209 aa11.26□□□□□ -0.61
CDK5RAP3-218ENST00000580391 TRGC2P03986 189 aa11.26□□□□□ -0.61
CDK5RAP3-218ENST00000580391 REC114Q7Z4M0 266 aa11.26□□□□□ -0.61
CDK5RAP3-218ENST00000580391 C16orf92Q96LL3 132 aa11.26□□□□□ -0.61
CDK5RAP3-218ENST00000580391 SRD5A3Q9H8P0 318 aa11.26□□□□□ -0.61
CDK5RAP3-218ENST00000580391 ZNF492Q9P255 531 aa11.26□□□□□ -0.61
CDK5RAP3-218ENST00000580391 A8MWP6 167 aa11.25□□□□□ -0.61
CDK5RAP3-218ENST00000580391 INAFM1C9JVW0 142 aa11.25□□□□□ -0.61
CDK5RAP3-218ENST00000580391 SOCS3O14543 225 aa11.25□□□□□ -0.61
CDK5RAP3-218ENST00000580391 CDX1P47902 265 aaPredicted RBP11.25□□□□□ -0.61
CDK5RAP3-218ENST00000580391 GBGT1Q8N5D6 347 aa11.25□□□□□ -0.61
CDK5RAP3-218ENST00000580391 ZFP30Q9Y2G7 519 aa11.25□□□□□ -0.61
CDK5RAP3-218ENST00000580391 SETXQ7Z333 2677 aaKnown RBP11.25□□□□□ -0.61
CDK5RAP3-218ENST00000580391 TYMSP04818 313 aa11.25□□□□□ -0.61
CDK5RAP3-218ENST00000580391 SLURP1P55000 103 aa11.25□□□□□ -0.61
CDK5RAP3-218ENST00000580391 RPL11P62913 178 aaKnown RBP11.25□□□□□ -0.61
CDK5RAP3-218ENST00000580391 ERCC8Q13216 396 aa11.25□□□□□ -0.61
CDK5RAP3-218ENST00000580391 C11orf44Q8N8P7 122 aa11.25□□□□□ -0.61
CDK5RAP3-218ENST00000580391 KLHL30-AS1Q8NEE0 82 aa11.25□□□□□ -0.61
CDK5RAP3-218ENST00000580391 C4orf3Q8WVX3 66 aa11.25□□□□□ -0.61
CDK5RAP3-218ENST00000580391 C20orf173Q96LM9 149 aa11.25□□□□□ -0.61
CDK5RAP3-218ENST00000580391 DUX3Q96PT4 197 aa11.25□□□□□ -0.61
CDK5RAP3-218ENST00000580391 NRN1Q9NPD7 142 aa11.25□□□□□ -0.61
CDK5RAP3-218ENST00000580391 TCF24Q7RTU0 167 aa11.24□□□□□ -0.61
CDK5RAP3-218ENST00000580391 LINC01006Q8NI28 216 aa11.24□□□□□ -0.61
CDK5RAP3-218ENST00000580391 MRPL53Q96EL3 112 aaKnown RBP11.24□□□□□ -0.61
CDK5RAP3-218ENST00000580391 GPR61Q9BZJ8 451 aa11.24□□□□□ -0.61
CDK5RAP3-218ENST00000580391 BIN3Q9NQY0 253 aa11.24□□□□□ -0.61
CDK5RAP3-218ENST00000580391 FN1P02751 2386 aaKnown RBP11.24□□□□□ -0.61
CDK5RAP3-218ENST00000580391 SMIM27A0A1W2PRY6 76 aa11.23□□□□□ -0.61
CDK5RAP3-218ENST00000580391 LGALS9O00182 355 aa11.23□□□□□ -0.61
CDK5RAP3-218ENST00000580391 RPP21Q9H633 154 aaKnown RBP11.23□□□□□ -0.61
CDK5RAP3-218ENST00000580391 TRAV9-1A0A075B6T8 112 aa11.23□□□□□ -0.61
CDK5RAP3-218ENST00000580391 PHOX2AO14813 284 aa11.23□□□□□ -0.61
CDK5RAP3-218ENST00000580391 P01737 135 aa11.23□□□□□ -0.61
CDK5RAP3-218ENST00000580391 OR11H1Q8NG94 326 aa11.23□□□□□ -0.61
CDK5RAP3-218ENST00000580391 PRR25Q96S07 402 aa11.23□□□□□ -0.61
CDK5RAP3-218ENST00000580391 C16orf95Q9H693 158 aa11.23□□□□□ -0.61
CDK5RAP3-218ENST00000580391 LINC01619G3V211 115 aa11.22□□□□□ -0.61
CDK5RAP3-218ENST00000580391 SPINK4O60575 86 aa11.22□□□□□ -0.61
CDK5RAP3-218ENST00000580391 FRMD6-AS1P0C7T7 363 aa11.22□□□□□ -0.61
CDK5RAP3-218ENST00000580391 CD28P10747 220 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 136.3 ms