RNA–Protein interactions for RNA: ENST00000579947.5

CCDC178-209, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 2,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-209ENST00000579947 LIMS3P0CW19 117 aa3.54□□□□□ -1.84
CCDC178-209ENST00000579947 LIMS4P0CW20 117 aa3.54□□□□□ -1.84
CCDC178-209ENST00000579947 PRDX6P30041 224 aa3.54□□□□□ -1.84
CCDC178-209ENST00000579947 CBX5P45973 191 aa3.54□□□□□ -1.84
CCDC178-209ENST00000579947 OR52I2Q8NH67 350 aa3.54□□□□□ -1.84
CCDC178-209ENST00000579947 PARD6GQ9BYG4 376 aaPredicted RBP3.54□□□□□ -1.84
CCDC178-209ENST00000579947 KLK12Q9UKR0 248 aa3.54□□□□□ -1.84
CCDC178-209ENST00000579947 KRTAP2-3P0C7H8 128 aa3.53□□□□□ -1.84
CCDC178-209ENST00000579947 SLC35G3Q8N808 338 aa3.53□□□□□ -1.84
CCDC178-209ENST00000579947 ZNF431Q8TF32 576 aaPredicted RBP3.53□□□□□ -1.84
CCDC178-209ENST00000579947 KRTAP2-4Q9BYR9 128 aa3.53□□□□□ -1.84
CCDC178-209ENST00000579947 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.53□□□□□ -1.84
CCDC178-209ENST00000579947 ZNF818PQ6ZRF7 136 aa3.53□□□□□ -1.84
CCDC178-209ENST00000579947 CCDC190Q86UF4 302 aa3.53□□□□□ -1.84
CCDC178-209ENST00000579947 BPIFCQ8NFQ6 507 aa3.53□□□□□ -1.84
CCDC178-209ENST00000579947 OR10P1Q8NGE3 313 aa3.53□□□□□ -1.84
CCDC178-209ENST00000579947 FCAMRQ8WWV6 532 aa3.53□□□□□ -1.84
CCDC178-209ENST00000579947 CHCHD7Q9BUK0 85 aa3.53□□□□□ -1.84
CCDC178-209ENST00000579947 GABARAPL3Q9BY60 117 aa3.53□□□□□ -1.84
CCDC178-209ENST00000579947 TMEM222Q9H0R3 208 aa3.53□□□□□ -1.84
CCDC178-209ENST00000579947 A0A0A0MQY5 61 aa3.52□□□□□ -1.85
CCDC178-209ENST00000579947 HIST1H1DP16402 221 aaKnown RBP3.52□□□□□ -1.85
CCDC178-209ENST00000579947 RNASEH2CQ8TDP1 164 aaKnown RBP3.52□□□□□ -1.85
CCDC178-209ENST00000579947 RPUSD4Q96CM3 377 aaKnown RBP3.52□□□□□ -1.85
CCDC178-209ENST00000579947 FLGP20930 4061 aaPredicted RBP3.52□□□□□ -1.85
CCDC178-209ENST00000579947 SLC25A5P05141 298 aaKnown RBP3.52□□□□□ -1.85
CCDC178-209ENST00000579947 CXCL3P19876 107 aa3.52□□□□□ -1.85
CCDC178-209ENST00000579947 WNT4P56705 351 aa3.52□□□□□ -1.85
CCDC178-209ENST00000579947 POLR2GP62487 172 aaKnown RBP eCLIP3.52□□□□□ -1.85
CCDC178-209ENST00000579947 NHLH2Q02577 135 aa3.52□□□□□ -1.85
CCDC178-209ENST00000579947 H2BFWTQ7Z2G1 175 aa3.52□□□□□ -1.85
CCDC178-209ENST00000579947 TSPAN14Q8NG11 270 aa3.52□□□□□ -1.85
CCDC178-209ENST00000579947 OR52I1Q8NGK6 324 aa3.52□□□□□ -1.85
CCDC178-209ENST00000579947 RASL10AQ92737 203 aa3.52□□□□□ -1.85
CCDC178-209ENST00000579947 MGAT4CQ9UBM8 478 aa3.52□□□□□ -1.85
CCDC178-209ENST00000579947 TMEM56-RWDD3S4R434 201 aa3.52□□□□□ -1.85
CCDC178-209ENST00000579947 C7orf71A4D174 169 aa3.51□□□□□ -1.85
CCDC178-209ENST00000579947 HLA-DQA1P01909 254 aa3.51□□□□□ -1.85
CCDC178-209ENST00000579947 HTR2BP41595 481 aa3.51□□□□□ -1.85
CCDC178-209ENST00000579947 ZNF138P52744 262 aa3.51□□□□□ -1.85
CCDC178-209ENST00000579947 LYZP61626 148 aa3.51□□□□□ -1.85
CCDC178-209ENST00000579947 AARDQ4LEZ3 155 aa3.51□□□□□ -1.85
CCDC178-209ENST00000579947 OR10R2Q8NGX6 335 aa3.51□□□□□ -1.85
CCDC178-209ENST00000579947 BORCS5Q969J3 196 aa3.51□□□□□ -1.85
CCDC178-209ENST00000579947 SEC22AQ96IW7 307 aa3.51□□□□□ -1.85
CCDC178-209ENST00000579947 GABARAPL1Q9H0R8 117 aa3.51□□□□□ -1.85
CCDC178-209ENST00000579947 PRYO14603 147 aa3.51□□□□□ -1.85
CCDC178-209ENST00000579947 NDUFS6O75380 124 aaKnown RBP3.51□□□□□ -1.85
CCDC178-209ENST00000579947 PPYP01298 95 aa3.51□□□□□ -1.85
CCDC178-209ENST00000579947 RLN1P04808 185 aa3.51□□□□□ -1.85
CCDC178-209ENST00000579947 TSPAN5P62079 268 aa3.51□□□□□ -1.85
CCDC178-209ENST00000579947 TMPRSS11AQ6ZMR5 421 aa3.51□□□□□ -1.85
CCDC178-209ENST00000579947 SUN5Q8TC36 379 aa3.51□□□□□ -1.85
CCDC178-209ENST00000579947 PRADC1Q9BSG0 188 aa3.51□□□□□ -1.85
CCDC178-209ENST00000579947 A0A087X0K7 114 aa3.5□□□□□ -1.85
CCDC178-209ENST00000579947 TRIAP1O43715 76 aa3.5□□□□□ -1.85
CCDC178-209ENST00000579947 GADD45AP24522 165 aa3.5□□□□□ -1.85
CCDC178-209ENST00000579947 Q6ZQT7 251 aa3.5□□□□□ -1.85
CCDC178-209ENST00000579947 MARCH1Q8TCQ1 289 aa3.5□□□□□ -1.85
CCDC178-209ENST00000579947 RETNLBQ9BQ08 111 aa3.5□□□□□ -1.85
CCDC178-209ENST00000579947 TP53TG3Q9ULZ0 132 aa3.5□□□□□ -1.85
CCDC178-209ENST00000579947 A0A087WWC5 75 aa3.5□□□□□ -1.85
CCDC178-209ENST00000579947 TSC22D2O75157 780 aa3.5□□□□□ -1.85
CCDC178-209ENST00000579947 SLPIP03973 132 aa3.5□□□□□ -1.85
CCDC178-209ENST00000579947 FCGR2CP31995 323 aa3.5□□□□□ -1.85
CCDC178-209ENST00000579947 RHOHQ15669 191 aa3.5□□□□□ -1.85
CCDC178-209ENST00000579947 ENHOQ6UWT2 76 aa3.5□□□□□ -1.85
CCDC178-209ENST00000579947 KRTAP4-12Q9BQ66 201 aa3.5□□□□□ -1.85
CCDC178-209ENST00000579947 KRTAP4-7Q9BYR0 210 aa3.5□□□□□ -1.85
CCDC178-209ENST00000579947 ANXA10Q9UJ72 324 aa3.5□□□□□ -1.85
CCDC178-209ENST00000579947 MPDU1O75352 247 aa3.5□□□□□ -1.85
CCDC178-209ENST00000579947 PGLYRP1O75594 196 aaPredicted RBP3.5□□□□□ -1.85
CCDC178-209ENST00000579947 FABP1P07148 127 aa3.5□□□□□ -1.85
CCDC178-209ENST00000579947 POLR2IP36954 125 aaKnown RBP3.5□□□□□ -1.85
CCDC178-209ENST00000579947 SRPXP78539 464 aa3.5□□□□□ -1.85
CCDC178-209ENST00000579947 C2orf83Q53S99 150 aa3.5□□□□□ -1.85
CCDC178-209ENST00000579947 OR4C5Q8NGB2 326 aa3.5□□□□□ -1.85
CCDC178-209ENST00000579947 ACY3Q96HD9 319 aa3.5□□□□□ -1.85
CCDC178-209ENST00000579947 C8orf4Q9NR00 106 aa3.5□□□□□ -1.85
CCDC178-209ENST00000579947 RAB22AQ9UL26 194 aa3.5□□□□□ -1.85
CCDC178-209ENST00000579947 MUC12Q9UKN1 5478 aa3.49□□□□□ -1.85
CCDC178-209ENST00000579947 IGLV10-54A0A075B6I4 117 aa3.49□□□□□ -1.85
CCDC178-209ENST00000579947 LINC00694P0DN24 101 aa3.49□□□□□ -1.85
CCDC178-209ENST00000579947 COX6A2Q02221 97 aa3.49□□□□□ -1.85
CCDC178-209ENST00000579947 KRTAP19-6Q3LI70 58 aa3.49□□□□□ -1.85
CCDC178-209ENST00000579947 KRTAP26-1Q6PEX3 210 aa3.49□□□□□ -1.85
CCDC178-209ENST00000579947 TBC1D26Q86UD7 250 aa3.49□□□□□ -1.85
CCDC178-209ENST00000579947 CENPNQ96H22 339 aaPredicted RBP3.49□□□□□ -1.85
CCDC178-209ENST00000579947 SLC25A22Q9H936 323 aa3.49□□□□□ -1.85
CCDC178-209ENST00000579947 ENY2Q9NPA8 101 aa3.49□□□□□ -1.85
CCDC178-209ENST00000579947 NDUFA13Q9P0J0 144 aa3.49□□□□□ -1.85
CCDC178-209ENST00000579947 TRBV6-4A0A1B0GX49 114 aa3.49□□□□□ -1.85
CCDC178-209ENST00000579947 PGPA6NDG6 321 aa3.49□□□□□ -1.85
CCDC178-209ENST00000579947 CTDSPLO15194 276 aa3.49□□□□□ -1.85
CCDC178-209ENST00000579947 RANBP1P43487 201 aa3.49□□□□□ -1.85
CCDC178-209ENST00000579947 ETV1P50549 477 aa3.49□□□□□ -1.85
CCDC178-209ENST00000579947 BTN1A1Q13410 526 aa3.49□□□□□ -1.85
CCDC178-209ENST00000579947 SLC25A29Q8N8R3 303 aa3.49□□□□□ -1.85
CCDC178-209ENST00000579947 EHFQ9NZC4 300 aa3.49□□□□□ -1.85
CCDC178-209ENST00000579947 IGKV1D-37A0A075B6S9 117 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms