RNA–Protein interactions for RNA: ENST00000577840.5

CUEDC1-207, Transcript of CUE domain containing 1, humanhuman

TSL 5 BASIC

Gene CUEDC1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-207ENST00000577840 LINC00052Q96N35 136 aa11.6□□□□□ -0.55
CUEDC1-207ENST00000577840 RPH3ALQ9UNE2 315 aa11.6□□□□□ -0.55
CUEDC1-207ENST00000577840 TRRAPQ9Y4A5 3859 aa11.6□□□□□ -0.55
CUEDC1-207ENST00000577840 K7EQM0 130 aa11.59□□□□□ -0.55
CUEDC1-207ENST00000577840 SOCS3O14543 225 aa11.59□□□□□ -0.55
CUEDC1-207ENST00000577840 CD81P60033 236 aa11.59□□□□□ -0.55
CUEDC1-207ENST00000577840 PSG3Q16557 428 aa11.59□□□□□ -0.55
CUEDC1-207ENST00000577840 PRR31Q5SQ13 230 aa11.59□□□□□ -0.55
CUEDC1-207ENST00000577840 IGFL4Q6B9Z1 124 aa11.59□□□□□ -0.55
CUEDC1-207ENST00000577840 ARL6IP6Q8N6S5 226 aa11.59□□□□□ -0.55
CUEDC1-207ENST00000577840 ZNF738Q8NE65 137 aa11.59□□□□□ -0.55
CUEDC1-207ENST00000577840 HIST1H2BAQ96A08 127 aa11.59□□□□□ -0.55
CUEDC1-207ENST00000577840 EPDR1Q9UM22 224 aa11.59□□□□□ -0.55
CUEDC1-207ENST00000577840 TRAV8-2A0A0B4J237 113 aa11.58□□□□□ -0.56
CUEDC1-207ENST00000577840 SERTM2A0A1B0GWG4 89 aa11.58□□□□□ -0.56
CUEDC1-207ENST00000577840 TMEM250H0YL14 139 aa11.58□□□□□ -0.56
CUEDC1-207ENST00000577840 CEBPGP53567 150 aa11.58□□□□□ -0.56
CUEDC1-207ENST00000577840 CMC4P56277 68 aaPredicted RBP11.58□□□□□ -0.56
CUEDC1-207ENST00000577840 SRSF3P84103 164 aaKnown RBP11.58□□□□□ -0.56
CUEDC1-207ENST00000577840 CCDC28AQ8IWP9 274 aa11.58□□□□□ -0.56
CUEDC1-207ENST00000577840 RNF182Q8N6D2 247 aa11.58□□□□□ -0.56
CUEDC1-207ENST00000577840 RPUSD4Q96CM3 377 aaKnown RBP11.58□□□□□ -0.56
CUEDC1-207ENST00000577840 CITED4Q96RK1 184 aa11.58□□□□□ -0.56
CUEDC1-207ENST00000577840 SLC35B3Q9H1N7 401 aa11.58□□□□□ -0.56
CUEDC1-207ENST00000577840 CMYA5Q8N3K9 4069 aa11.58□□□□□ -0.56
CUEDC1-207ENST00000577840 M0R3E3 92 aa11.57□□□□□ -0.56
CUEDC1-207ENST00000577840 PEX7O00628 323 aa11.57□□□□□ -0.56
CUEDC1-207ENST00000577840 SRP19P09132 144 aaKnown RBP11.57□□□□□ -0.56
CUEDC1-207ENST00000577840 ZNF688P0C7X2 276 aa11.57□□□□□ -0.56
CUEDC1-207ENST00000577840 HLA-DMBP28068 263 aa11.57□□□□□ -0.56
CUEDC1-207ENST00000577840 AKR1C3P42330 323 aa11.57□□□□□ -0.56
CUEDC1-207ENST00000577840 DEFA6Q01524 100 aa11.57□□□□□ -0.56
CUEDC1-207ENST00000577840 SLC7A5P1Q8MH63 180 aa11.57□□□□□ -0.56
CUEDC1-207ENST00000577840 ATG101Q9BSB4 218 aa11.57□□□□□ -0.56
CUEDC1-207ENST00000577840 SCO2A0A1W2PP80 73 aa11.56□□□□□ -0.56
CUEDC1-207ENST00000577840 IZUMO1RA6ND01 250 aa11.56□□□□□ -0.56
CUEDC1-207ENST00000577840 DIRC3C9JPN6 131 aa11.56□□□□□ -0.56
CUEDC1-207ENST00000577840 TCRAP04437 139 aa11.56□□□□□ -0.56
CUEDC1-207ENST00000577840 IGLL1P15814 213 aa11.56□□□□□ -0.56
CUEDC1-207ENST00000577840 CNN1P51911 297 aaKnown RBP11.56□□□□□ -0.56
CUEDC1-207ENST00000577840 GNG5P63218 68 aa11.56□□□□□ -0.56
CUEDC1-207ENST00000577840 PSMG4Q5JS54 123 aa11.56□□□□□ -0.56
CUEDC1-207ENST00000577840 CYB561D1Q8N8Q1 229 aa11.56□□□□□ -0.56
CUEDC1-207ENST00000577840 C11orf52Q96A22 123 aa11.56□□□□□ -0.56
CUEDC1-207ENST00000577840 S100A9P06702 114 aaKnown RBP11.55□□□□□ -0.56
CUEDC1-207ENST00000577840 UBE2G1P62253 170 aa11.55□□□□□ -0.56
CUEDC1-207ENST00000577840 GOLT1AQ6ZVE7 132 aa11.55□□□□□ -0.56
CUEDC1-207ENST00000577840 C20orf173Q96LM9 149 aa11.55□□□□□ -0.56
CUEDC1-207ENST00000577840 ZNF705FA8MVS1 300 aaPredicted RBP11.54□□□□□ -0.56
CUEDC1-207ENST00000577840 SFTA3P0C7M3 94 aa11.54□□□□□ -0.56
CUEDC1-207ENST00000577840 ZNF674Q2M3X9 581 aa11.54□□□□□ -0.56
CUEDC1-207ENST00000577840 SOHLH1Q5JUK2 328 aa11.54□□□□□ -0.56
CUEDC1-207ENST00000577840 EBLN2Q6P2I7 272 aa11.54□□□□□ -0.56
CUEDC1-207ENST00000577840 OR10J6PQ8NGY7 276 aa11.54□□□□□ -0.56
CUEDC1-207ENST00000577840 ZMAT5Q9UDW3 170 aaKnown RBP11.54□□□□□ -0.56
CUEDC1-207ENST00000577840 ZNF256Q9Y2P7 627 aaPredicted RBP11.54□□□□□ -0.56
CUEDC1-207ENST00000577840 RBAKDNA6NC62 111 aa11.53□□□□□ -0.56
CUEDC1-207ENST00000577840 FBLL1A6NHQ2 334 aaKnown RBP11.53□□□□□ -0.56
CUEDC1-207ENST00000577840 C9JQL5 133 aa11.53□□□□□ -0.56
CUEDC1-207ENST00000577840 DEFB131AP59861 70 aa11.53□□□□□ -0.56
CUEDC1-207ENST00000577840 FAM24BQ8N5W8 94 aa11.53□□□□□ -0.56
CUEDC1-207ENST00000577840 FMC1Q96HJ9 113 aa11.53□□□□□ -0.56
CUEDC1-207ENST00000577840 PARLQ9H300 379 aa11.53□□□□□ -0.56
CUEDC1-207ENST00000577840 TMEM218A2RU14 115 aa11.52□□□□□ -0.57
CUEDC1-207ENST00000577840 ZNF727A8MUV8 499 aa11.52□□□□□ -0.57
CUEDC1-207ENST00000577840 OR11H12B2RN74 326 aa11.52□□□□□ -0.57
CUEDC1-207ENST00000577840 F8W036 122 aa11.52□□□□□ -0.57
CUEDC1-207ENST00000577840 TAS2R60P59551 318 aa11.52□□□□□ -0.57
CUEDC1-207ENST00000577840 BEAN1Q3B7T3 259 aa11.52□□□□□ -0.57
CUEDC1-207ENST00000577840 FAM74A3Q4VXF1 159 aa11.52□□□□□ -0.57
CUEDC1-207ENST00000577840 GTSCR1Q86UQ5 136 aa11.52□□□□□ -0.57
CUEDC1-207ENST00000577840 TMEM75Q8N9X5 138 aa11.52□□□□□ -0.57
CUEDC1-207ENST00000577840 C2CD4CQ8TF44 421 aa11.52□□□□□ -0.57
CUEDC1-207ENST00000577840 MAP6D1Q9H9H5 199 aa11.52□□□□□ -0.57
CUEDC1-207ENST00000577840 IGKV2-40A0A087WW87 121 aaPredicted RBP11.51□□□□□ -0.57
CUEDC1-207ENST00000577840 DUSP14O95147 198 aaKnown RBP11.51□□□□□ -0.57
CUEDC1-207ENST00000577840 IGKV2D-40P01614 121 aaPredicted RBP11.51□□□□□ -0.57
CUEDC1-207ENST00000577840 RPL35P42766 123 aaKnown RBP11.51□□□□□ -0.57
CUEDC1-207ENST00000577840 HIST1H1AQ02539 215 aaPredicted RBP11.51□□□□□ -0.57
CUEDC1-207ENST00000577840 TMEM183BQ1AE95 376 aa11.51□□□□□ -0.57
CUEDC1-207ENST00000577840 TMEM78Q5T7P6 136 aa11.51□□□□□ -0.57
CUEDC1-207ENST00000577840 FOXI2Q6ZQN5 318 aa11.51□□□□□ -0.57
CUEDC1-207ENST00000577840 OR8A1Q8NGG7 326 aa11.51□□□□□ -0.57
CUEDC1-207ENST00000577840 SMIM7Q9BQ49 75 aa11.51□□□□□ -0.57
CUEDC1-207ENST00000577840 FAM110AQ9BQ89 295 aa11.51□□□□□ -0.57
CUEDC1-207ENST00000577840 TRAV34A0A0B4J273 112 aa11.5□□□□□ -0.57
CUEDC1-207ENST00000577840 KRBOX1C9JBD0 128 aa11.5□□□□□ -0.57
CUEDC1-207ENST00000577840 PRAC2D3DTV9 90 aa11.5□□□□□ -0.57
CUEDC1-207ENST00000577840 FLI1Q01543 452 aaPredicted RBP11.5□□□□□ -0.57
CUEDC1-207ENST00000577840 PRNTQ86SH4 94 aa11.5□□□□□ -0.57
CUEDC1-207ENST00000577840 LINC00477Q96M19 166 aa11.5□□□□□ -0.57
CUEDC1-207ENST00000577840 NDFIP1Q9BT67 221 aa11.5□□□□□ -0.57
CUEDC1-207ENST00000577840 PPP1R14DQ9NXH3 145 aa11.5□□□□□ -0.57
CUEDC1-207ENST00000577840 PSG8Q9UQ74 426 aa11.5□□□□□ -0.57
CUEDC1-207ENST00000577840 PRB4P10163 310 aaPredicted RBP11.49□□□□□ -0.57
CUEDC1-207ENST00000577840 GNG4P50150 75 aa11.49□□□□□ -0.57
CUEDC1-207ENST00000577840 C9orf47Q6ZRZ4 202 aa11.49□□□□□ -0.57
CUEDC1-207ENST00000577840 SGK494Q96LW2 274 aa11.49□□□□□ -0.57
CUEDC1-207ENST00000577840 LINC00479Q96M42 142 aa11.49□□□□□ -0.57
CUEDC1-207ENST00000577840 NIPSNAP3BQ9BS92 247 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms