RNA–Protein interactions for RNA: ENST00000574226.5

TVP23B-206, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23B, Length 1,080 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-206ENST00000574226 H3BQ15 152 aa11.75□□□□□ -0.53
TVP23B-206ENST00000574226 BAP18Q8IXM2 172 aa11.75□□□□□ -0.53
TVP23B-206ENST00000574226 MRPL53Q96EL3 112 aaKnown RBP11.75□□□□□ -0.53
TVP23B-206ENST00000574226 ODF3Q96PU9 254 aa11.75□□□□□ -0.53
TVP23B-206ENST00000574226 LINC01587Q99440 93 aa11.75□□□□□ -0.53
TVP23B-206ENST00000574226 PRELID1Q9Y255 219 aa11.75□□□□□ -0.53
TVP23B-206ENST00000574226 TRAV12-2A0A075B6T6 113 aa11.74□□□□□ -0.53
TVP23B-206ENST00000574226 H7BYZ3 331 aa11.74□□□□□ -0.53
TVP23B-206ENST00000574226 SIX6O95475 246 aa11.74□□□□□ -0.53
TVP23B-206ENST00000574226 NHLH2Q02577 135 aa11.74□□□□□ -0.53
TVP23B-206ENST00000574226 C16orf74Q96GX8 76 aa11.74□□□□□ -0.53
TVP23B-206ENST00000574226 TRBV19A0A075B6N1 114 aa11.73□□□□□ -0.53
TVP23B-206ENST00000574226 ZNF705GA8MUZ8 300 aaPredicted RBP11.73□□□□□ -0.53
TVP23B-206ENST00000574226 SLC17A3O00476 420 aa11.73□□□□□ -0.53
TVP23B-206ENST00000574226 SSNA1O43805 119 aa11.73□□□□□ -0.53
TVP23B-206ENST00000574226 HIST1H1EP10412 219 aaKnown RBP11.73□□□□□ -0.53
TVP23B-206ENST00000574226 LRRC37A5PQ49AS3 106 aa11.73□□□□□ -0.53
TVP23B-206ENST00000574226 POM121L12Q8N7R1 296 aa11.73□□□□□ -0.53
TVP23B-206ENST00000574226 EPPK1P58107 5090 aaKnown RBP11.73□□□□□ -0.53
TVP23B-206ENST00000574226 TRAV5A0A0B4J249 113 aa11.72□□□□□ -0.53
TVP23B-206ENST00000574226 C17orf112F2Z3M2 114 aa11.72□□□□□ -0.53
TVP23B-206ENST00000574226 PPP1R1CQ8WVI7 109 aa11.72□□□□□ -0.53
TVP23B-206ENST00000574226 ZNF586Q9NXT0 402 aa11.72□□□□□ -0.53
TVP23B-206ENST00000574226 OR5AC2Q9NZP5 309 aa11.72□□□□□ -0.53
TVP23B-206ENST00000574226 TIMM9Q9Y5J7 89 aa11.72□□□□□ -0.53
TVP23B-206ENST00000574226 TIMM8BQ9Y5J9 83 aaPredicted RBP11.72□□□□□ -0.53
TVP23B-206ENST00000574226 NPIPB6E9PJ23 425 aa11.71□□□□□ -0.53
TVP23B-206ENST00000574226 H0YIZ8 118 aa11.71□□□□□ -0.53
TVP23B-206ENST00000574226 SNRPCP09234 159 aaKnown RBP11.71□□□□□ -0.53
TVP23B-206ENST00000574226 LEPP41159 167 aa11.71□□□□□ -0.53
TVP23B-206ENST00000574226 H2BFSP57053 126 aa11.71□□□□□ -0.53
TVP23B-206ENST00000574226 C15orf53Q8NAA6 179 aa11.71□□□□□ -0.53
TVP23B-206ENST00000574226 THAP6Q8TBB0 222 aa11.71□□□□□ -0.53
TVP23B-206ENST00000574226 TMEM263Q8WUH6 116 aaKnown RBP11.71□□□□□ -0.53
TVP23B-206ENST00000574226 MRPL32Q9BYC8 188 aaKnown RBP11.71□□□□□ -0.53
TVP23B-206ENST00000574226 WDR61Q9GZS3 305 aaKnown RBP11.71□□□□□ -0.53
TVP23B-206ENST00000574226 AAMDCQ9H7C9 122 aa11.71□□□□□ -0.53
TVP23B-206ENST00000574226 KMT2AQ03164 3969 aa11.7□□□□□ -0.54
TVP23B-206ENST00000574226 H3BTX0 84 aa11.7□□□□□ -0.54
TVP23B-206ENST00000574226 HTN3P15516 51 aa11.7□□□□□ -0.54
TVP23B-206ENST00000574226 CLINT1Q14677 625 aa11.7□□□□□ -0.54
TVP23B-206ENST00000574226 RNF212Q495C1 297 aa11.7□□□□□ -0.54
TVP23B-206ENST00000574226 CCDC28AQ8IWP9 274 aa11.7□□□□□ -0.54
TVP23B-206ENST00000574226 CBY3A6NI87 242 aa11.69□□□□□ -0.54
TVP23B-206ENST00000574226 PRAC2D3DTV9 90 aa11.69□□□□□ -0.54
TVP23B-206ENST00000574226 MPC2O95563 127 aa11.69□□□□□ -0.54
TVP23B-206ENST00000574226 LINC00477Q96M19 166 aa11.69□□□□□ -0.54
TVP23B-206ENST00000574226 ATP5SQ99766 215 aa11.69□□□□□ -0.54
TVP23B-206ENST00000574226 PLAC8L1A1L4L8 177 aa11.68□□□□□ -0.54
TVP23B-206ENST00000574226 IFNA5P01569 189 aa11.68□□□□□ -0.54
TVP23B-206ENST00000574226 ATP5G1P05496 136 aa11.68□□□□□ -0.54
TVP23B-206ENST00000574226 DEFB130BP0DP73 79 aa11.68□□□□□ -0.54
TVP23B-206ENST00000574226 DEFB130AP0DP74 79 aa11.68□□□□□ -0.54
TVP23B-206ENST00000574226 HTN1P15515 57 aa11.68□□□□□ -0.54
TVP23B-206ENST00000574226 AZU1P20160 251 aa11.68□□□□□ -0.54
TVP23B-206ENST00000574226 ATP5G3P48201 142 aa11.68□□□□□ -0.54
TVP23B-206ENST00000574226 GFI1BQ5VTD9 330 aa11.68□□□□□ -0.54
TVP23B-206ENST00000574226 UBE2DNLQ8IWF7 75 aa11.68□□□□□ -0.54
TVP23B-206ENST00000574226 RNASE8Q8TDE3 154 aaKnown RBP11.68□□□□□ -0.54
TVP23B-206ENST00000574226 PYGO2Q9BRQ0 406 aa11.68□□□□□ -0.54
TVP23B-206ENST00000574226 PLA2G2EQ9NZK7 142 aa11.68□□□□□ -0.54
TVP23B-206ENST00000574226 HSPB11Q9Y547 144 aa11.68□□□□□ -0.54
TVP23B-206ENST00000574226 NDUFB4O95168 129 aa11.67□□□□□ -0.54
TVP23B-206ENST00000574226 SLC25A5P05141 298 aaKnown RBP11.67□□□□□ -0.54
TVP23B-206ENST00000574226 NMBP08949 121 aa11.67□□□□□ -0.54
TVP23B-206ENST00000574226 NBEAP1P0C6P0 100 aa11.67□□□□□ -0.54
TVP23B-206ENST00000574226 CT45A10P0DMU9 189 aa11.67□□□□□ -0.54
TVP23B-206ENST00000574226 FAM3BP58499 235 aaPredicted RBP11.67□□□□□ -0.54
TVP23B-206ENST00000574226 TMEM88Q6PEY1 159 aa11.67□□□□□ -0.54
TVP23B-206ENST00000574226 LINC00336Q6ZUF6 198 aa11.67□□□□□ -0.54
TVP23B-206ENST00000574226 SCGB1C1Q8TD33 95 aa11.67□□□□□ -0.54
TVP23B-206ENST00000574226 OR51M1Q9H341 326 aa11.67□□□□□ -0.54
TVP23B-206ENST00000574226 FUT9Q9Y231 359 aa11.67□□□□□ -0.54
TVP23B-206ENST00000574226 PRM2P04554 102 aa11.66□□□□□ -0.54
TVP23B-206ENST00000574226 PYYP10082 97 aa11.66□□□□□ -0.54
TVP23B-206ENST00000574226 RPL12P30050 165 aaKnown RBP11.66□□□□□ -0.54
TVP23B-206ENST00000574226 GCSAMLQ5JQS6 135 aa11.66□□□□□ -0.54
TVP23B-206ENST00000574226 BLNKQ8WV28 456 aa11.66□□□□□ -0.54
TVP23B-206ENST00000574226 FAM167A-AS1Q96KT0 104 aa11.66□□□□□ -0.54
TVP23B-206ENST00000574226 SLC25A2Q9BXI2 301 aa11.66□□□□□ -0.54
TVP23B-206ENST00000574226 PARD6GQ9BYG4 376 aaPredicted RBP11.66□□□□□ -0.54
TVP23B-206ENST00000574226 BIRC6Q9NR09 4857 aa11.66□□□□□ -0.54
TVP23B-206ENST00000574226 M0R3E3 92 aa11.65□□□□□ -0.54
TVP23B-206ENST00000574226 TAS2R45P59539 299 aa11.65□□□□□ -0.54
TVP23B-206ENST00000574226 LGALS9BQ3B8N2 356 aa11.65□□□□□ -0.54
TVP23B-206ENST00000574226 C9orf47Q6ZRZ4 202 aa11.65□□□□□ -0.54
TVP23B-206ENST00000574226 LYPD1Q8N2G4 141 aa11.65□□□□□ -0.54
TVP23B-206ENST00000574226 PAXXQ9BUH6 204 aa11.65□□□□□ -0.54
TVP23B-206ENST00000574226 TRBV7-9A0A0J9YWB2 115 aa11.64□□□□□ -0.55
TVP23B-206ENST00000574226 SNURFLB1AK76 121 aa11.64□□□□□ -0.55
TVP23B-206ENST00000574226 F5H768 121 aa11.64□□□□□ -0.55
TVP23B-206ENST00000574226 PTTG1O95997 202 aa11.64□□□□□ -0.55
TVP23B-206ENST00000574226 ICAM4Q14773 271 aa11.64□□□□□ -0.55
TVP23B-206ENST00000574226 TMEM78Q5T7P6 136 aa11.64□□□□□ -0.55
TVP23B-206ENST00000574226 MIR17HGQ75NE6 70 aa11.64□□□□□ -0.55
TVP23B-206ENST00000574226 RNF141Q8WVD5 230 aa11.64□□□□□ -0.55
TVP23B-206ENST00000574226 NOP10Q9NPE3 64 aaKnown RBP11.64□□□□□ -0.55
TVP23B-206ENST00000574226 VPS13DQ5THJ4 4388 aa11.64□□□□□ -0.55
TVP23B-206ENST00000574226 TRAV12-3A0A0B4J271 114 aa11.63□□□□□ -0.55
TVP23B-206ENST00000574226 C7orf71A4D174 169 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms