RNA–Protein interactions for RNA: ENST00000573710.7

CACNA1A-202, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-202ENST00000573710 SRSF3P84103 164 aaKnown RBP12.96□□□□□ -0.34
CACNA1A-202ENST00000573710 IGHV1-46P01743 117 aa12.96□□□□□ -0.34
CACNA1A-202ENST00000573710 TIMP3P35625 211 aa12.96□□□□□ -0.34
CACNA1A-202ENST00000573710 SPATA31B1PQ5VZV4 182 aa12.96□□□□□ -0.34
CACNA1A-202ENST00000573710 GLI3P10071 1580 aa12.95□□□□□ -0.34
CACNA1A-202ENST00000573710 IGHV1-3A0A0C4DH29 117 aa12.95□□□□□ -0.34
CACNA1A-202ENST00000573710 NDUFC2O95298 119 aa12.95□□□□□ -0.34
CACNA1A-202ENST00000573710 TMEM243Q9BU79 118 aa12.95□□□□□ -0.34
CACNA1A-202ENST00000573710 SAA4P35542 130 aa12.95□□□□□ -0.34
CACNA1A-202ENST00000573710 NDUFB1O75438 58 aa12.95□□□□□ -0.34
CACNA1A-202ENST00000573710 LIMS1P48059 325 aa12.95□□□□□ -0.34
CACNA1A-202ENST00000573710 ANKRD29Q8N6D5 301 aa12.95□□□□□ -0.34
CACNA1A-202ENST00000573710 TSSC4Q9Y5U2 329 aaPredicted RBP12.95□□□□□ -0.34
CACNA1A-202ENST00000573710 IGKV1D-12P01611 117 aa12.94□□□□□ -0.34
CACNA1A-202ENST00000573710 FOXE3Q13461 319 aa12.94□□□□□ -0.34
CACNA1A-202ENST00000573710 IGKV3D-7A0A0C4DH55 119 aa12.94□□□□□ -0.34
CACNA1A-202ENST00000573710 CD160O95971 181 aa12.94□□□□□ -0.34
CACNA1A-202ENST00000573710 C8orf49Q96NF6 230 aa12.94□□□□□ -0.34
CACNA1A-202ENST00000573710 LINC01619G3V211 115 aa12.94□□□□□ -0.34
CACNA1A-202ENST00000573710 HLA-DRB4P13762 266 aa12.94□□□□□ -0.34
CACNA1A-202ENST00000573710 HLA-DRB4X5D2U9 266 aa12.94□□□□□ -0.34
CACNA1A-202ENST00000573710 YPEL1O60688 119 aa12.94□□□□□ -0.34
CACNA1A-202ENST00000573710 TMEM105Q8N8V8 129 aa12.94□□□□□ -0.34
CACNA1A-202ENST00000573710 CFHR4Q92496 578 aa12.94□□□□□ -0.34
CACNA1A-202ENST00000573710 YPEL2Q96QA6 119 aa12.94□□□□□ -0.34
CACNA1A-202ENST00000573710 ZC2HC1BQ5TFG8 222 aa12.94□□□□□ -0.34
CACNA1A-202ENST00000573710 RHODO00212 210 aa12.93□□□□□ -0.34
CACNA1A-202ENST00000573710 NUP35Q8NFH5 326 aa12.93□□□□□ -0.34
CACNA1A-202ENST00000573710 TRPT1Q86TN4 253 aaKnown RBP12.93□□□□□ -0.34
CACNA1A-202ENST00000573710 IGHV3-30P01768 117 aa12.93□□□□□ -0.34
CACNA1A-202ENST00000573710 IGHV3-33P01772 117 aa12.93□□□□□ -0.34
CACNA1A-202ENST00000573710 IGHV3-30-3P0DP02 117 aa12.93□□□□□ -0.34
CACNA1A-202ENST00000573710 IGHV3-30-5P0DP03 117 aa12.93□□□□□ -0.34
CACNA1A-202ENST00000573710 E9PLN8 166 aa12.93□□□□□ -0.34
CACNA1A-202ENST00000573710 IRF3Q14653 427 aa12.93□□□□□ -0.34
CACNA1A-202ENST00000573710 POU2AF1Q16633 256 aa12.93□□□□□ -0.34
CACNA1A-202ENST00000573710 A0A0U1RQV1 116 aa12.92□□□□□ -0.34
CACNA1A-202ENST00000573710 NHSL1Q5SYE7 1610 aa12.92□□□□□ -0.34
CACNA1A-202ENST00000573710 PQLC2LA1A4F0 135 aa12.92□□□□□ -0.34
CACNA1A-202ENST00000573710 TSKUQ8WUA8 353 aa12.92□□□□□ -0.34
CACNA1A-202ENST00000573710 IGKV1D-13A0A0B4J2D9 117 aa12.92□□□□□ -0.34
CACNA1A-202ENST00000573710 ERVH48-1M5A8F1 160 aa12.92□□□□□ -0.34
CACNA1A-202ENST00000573710 IGKV1-13P0DP09 117 aa12.92□□□□□ -0.34
CACNA1A-202ENST00000573710 DLEC1Q9Y238 1755 aa12.92□□□□□ -0.34
CACNA1A-202ENST00000573710 COX7B2Q8TF08 81 aa12.92□□□□□ -0.34
CACNA1A-202ENST00000573710 C4orf51C9J302 202 aa12.92□□□□□ -0.34
CACNA1A-202ENST00000573710 A0A1B0GX51 115 aa12.92□□□□□ -0.34
CACNA1A-202ENST00000573710 ZNF497Q6ZNH5 498 aa12.92□□□□□ -0.34
CACNA1A-202ENST00000573710 OR11H6Q8NGC7 330 aa12.92□□□□□ -0.34
CACNA1A-202ENST00000573710 FANCD2OSQ96PS1 177 aa12.92□□□□□ -0.34
CACNA1A-202ENST00000573710 MRPL23Q16540 153 aaKnown RBP12.91□□□□□ -0.34
CACNA1A-202ENST00000573710 WFDC11Q8NEX6 87 aa12.91□□□□□ -0.34
CACNA1A-202ENST00000573710 RLFQ13129 1914 aa12.91□□□□□ -0.34
CACNA1A-202ENST00000573710 IGFBPL1Q8WX77 278 aa12.91□□□□□ -0.34
CACNA1A-202ENST00000573710 CARD19Q96LW7 228 aa12.91□□□□□ -0.34
CACNA1A-202ENST00000573710 GTSF1Q8WW33 167 aa12.9□□□□□ -0.34
CACNA1A-202ENST00000573710 ASPHD1Q5U4P2 390 aa12.9□□□□□ -0.34
CACNA1A-202ENST00000573710 A0A0G2JNJ9 132 aa12.9□□□□□ -0.34
CACNA1A-202ENST00000573710 UTF1Q5T230 341 aa12.9□□□□□ -0.34
CACNA1A-202ENST00000573710 RETNQ9HD89 108 aa12.9□□□□□ -0.34
CACNA1A-202ENST00000573710 NOP10Q9NPE3 64 aaKnown RBP12.9□□□□□ -0.34
CACNA1A-202ENST00000573710 Q9UFV3 132 aa12.9□□□□□ -0.34
CACNA1A-202ENST00000573710 IGHV1-8P0DP01 117 aa12.9□□□□□ -0.34
CACNA1A-202ENST00000573710 MST1LQ2TV78 715 aa12.9□□□□□ -0.34
CACNA1A-202ENST00000573710 FUSP35637 526 aaKnown RBP eCLIP12.9□□□□□ -0.34
CACNA1A-202ENST00000573710 C20orf204Q6ZNR8 217 aa12.9□□□□□ -0.34
CACNA1A-202ENST00000573710 PTPRQQ9UMZ3 2332 aa12.9□□□□□ -0.34
CACNA1A-202ENST00000573710 TRBV5-7A0A0A0MS05 114 aa12.9□□□□□ -0.34
CACNA1A-202ENST00000573710 LINC01549A6NIU2 74 aa12.9□□□□□ -0.34
CACNA1A-202ENST00000573710 K7ERS5 55 aa12.9□□□□□ -0.34
CACNA1A-202ENST00000573710 K7ERJ3 54 aa12.89□□□□□ -0.35
CACNA1A-202ENST00000573710 COL8A2P25067 703 aa12.89□□□□□ -0.35
CACNA1A-202ENST00000573710 C1orf100Q5SVJ3 147 aa12.89□□□□□ -0.35
CACNA1A-202ENST00000573710 ORMDL1Q9P0S3 153 aa12.89□□□□□ -0.35
CACNA1A-202ENST00000573710 A0A096LNI7 61 aa12.89□□□□□ -0.35
CACNA1A-202ENST00000573710 PIN1P1O15428 100 aa12.89□□□□□ -0.35
CACNA1A-202ENST00000573710 IGHV4-30-4P0DP06 118 aa12.89□□□□□ -0.35
CACNA1A-202ENST00000573710 IGHV4-31P0DP07 118 aa12.89□□□□□ -0.35
CACNA1A-202ENST00000573710 MP68P56378 58 aa12.89□□□□□ -0.35
CACNA1A-202ENST00000573710 ATRAIDQ6UW56 229 aa12.89□□□□□ -0.35
CACNA1A-202ENST00000573710 RTBDNQ9BSG5 229 aaPredicted RBP12.89□□□□□ -0.35
CACNA1A-202ENST00000573710 PPP1R3EQ9H7J1 279 aa12.89□□□□□ -0.35
CACNA1A-202ENST00000573710 MUSTN1Q8IVN3 82 aa12.89□□□□□ -0.35
CACNA1A-202ENST00000573710 GPHB5Q86YW7 130 aa12.89□□□□□ -0.35
CACNA1A-202ENST00000573710 IGHMP01871 453 aa12.89□□□□□ -0.35
CACNA1A-202ENST00000573710 C1QTNF5Q9BXJ0 243 aa12.89□□□□□ -0.35
CACNA1A-202ENST00000573710 ARMS2P0C7Q2 107 aa12.89□□□□□ -0.35
CACNA1A-202ENST00000573710 IGLL5B9A064 214 aa12.88□□□□□ -0.35
CACNA1A-202ENST00000573710 C17orf77Q96MU5 243 aa12.88□□□□□ -0.35
CACNA1A-202ENST00000573710 NHLRC3Q5JS37 347 aa12.88□□□□□ -0.35
CACNA1A-202ENST00000573710 USMG5Q96IX5 58 aa12.88□□□□□ -0.35
CACNA1A-202ENST00000573710 TMEM14DPA8MWL7 114 aa12.87□□□□□ -0.35
CACNA1A-202ENST00000573710 NCR3O14931 201 aa12.87□□□□□ -0.35
CACNA1A-202ENST00000573710 LINC00205P59089 165 aa12.87□□□□□ -0.35
CACNA1A-202ENST00000573710 RBBP6Q7Z6E9 1792 aaKnown RBP12.87□□□□□ -0.35
CACNA1A-202ENST00000573710 FAM90A1Q86YD7 464 aa12.87□□□□□ -0.35
CACNA1A-202ENST00000573710 DAZ1Q9NQZ3 744 aaKnown RBP12.87□□□□□ -0.35
CACNA1A-202ENST00000573710 TRAV3A0A0B4J244 114 aa12.87□□□□□ -0.35
CACNA1A-202ENST00000573710 LYPD6Q86Y78 171 aa12.87□□□□□ -0.35
CACNA1A-202ENST00000573710 I3L3M4 83 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms