RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 TPPP2P59282 170 aa14□□□□□ -0.17
SMPD3-211ENST00000568373 KRTAP10-9P60411 292 aa14□□□□□ -0.17
SMPD3-211ENST00000568373 SLAQ13239 276 aa14□□□□□ -0.17
SMPD3-211ENST00000568373 GDF5OSQ5U4N7 250 aa14□□□□□ -0.17
SMPD3-211ENST00000568373 BAGE3Q86Y29 109 aa14□□□□□ -0.17
SMPD3-211ENST00000568373 METTL26Q96S19 204 aa14□□□□□ -0.17
SMPD3-211ENST00000568373 ASCL2Q99929 193 aa14□□□□□ -0.17
SMPD3-211ENST00000568373 SERF1AO75920 110 aa13.99□□□□□ -0.17
SMPD3-211ENST00000568373 C1orf194Q5T5A4 169 aa13.99□□□□□ -0.17
SMPD3-211ENST00000568373 RBPMS2Q6ZRY4 209 aaKnown RBP13.99□□□□□ -0.17
SMPD3-211ENST00000568373 OR2D3Q8NGH3 330 aa13.99□□□□□ -0.17
SMPD3-211ENST00000568373 ABCA12Q86UK0 2595 aa13.99□□□□□ -0.17
SMPD3-211ENST00000568373 CHEK1O14757 476 aa13.99□□□□□ -0.17
SMPD3-211ENST00000568373 IGHG4P01861 327 aa13.99□□□□□ -0.17
SMPD3-211ENST00000568373 LOXL1Q08397 574 aaPredicted RBP13.99□□□□□ -0.17
SMPD3-211ENST00000568373 OR10J3Q5JRS4 329 aa13.99□□□□□ -0.17
SMPD3-211ENST00000568373 ZANQ9Y493 2812 aa13.98□□□□□ -0.17
SMPD3-211ENST00000568373 IGKV2-40A0A087WW87 121 aaPredicted RBP13.98□□□□□ -0.17
SMPD3-211ENST00000568373 F2Z2F3 143 aa13.98□□□□□ -0.17
SMPD3-211ENST00000568373 TGFAP01135 160 aa13.98□□□□□ -0.17
SMPD3-211ENST00000568373 IGKV2D-40P01614 121 aaPredicted RBP13.98□□□□□ -0.17
SMPD3-211ENST00000568373 SRIP30626 198 aa13.98□□□□□ -0.17
SMPD3-211ENST00000568373 CAMPP49913 170 aa13.98□□□□□ -0.17
SMPD3-211ENST00000568373 Q6ZS46 218 aa13.98□□□□□ -0.17
SMPD3-211ENST00000568373 MAPK1IP1LQ8NDC0 245 aa13.98□□□□□ -0.17
SMPD3-211ENST00000568373 PGLYRP4Q96LB8 373 aa13.98□□□□□ -0.17
SMPD3-211ENST00000568373 NAV2Q8IVL1 2488 aa13.98□□□□□ -0.17
SMPD3-211ENST00000568373 IGHV3-66A0A0C4DH42 116 aa13.97□□□□□ -0.17
SMPD3-211ENST00000568373 FBLL1A6NHQ2 334 aaKnown RBP13.97□□□□□ -0.17
SMPD3-211ENST00000568373 APOHP02749 345 aaPredicted RBP13.97□□□□□ -0.17
SMPD3-211ENST00000568373 GZMBP10144 247 aa13.97□□□□□ -0.17
SMPD3-211ENST00000568373 CRIP1P50238 77 aa13.97□□□□□ -0.17
SMPD3-211ENST00000568373 HBBP68871 147 aa13.97□□□□□ -0.17
SMPD3-211ENST00000568373 OR5R1Q8NH85 324 aa13.97□□□□□ -0.17
SMPD3-211ENST00000568373 USMG5Q96IX5 58 aa13.97□□□□□ -0.17
SMPD3-211ENST00000568373 RNF223E7ERA6 249 aa13.97□□□□□ -0.17
SMPD3-211ENST00000568373 CT45A10P0DMU9 189 aa13.97□□□□□ -0.17
SMPD3-211ENST00000568373 HLA-DMBP28068 263 aa13.97□□□□□ -0.17
SMPD3-211ENST00000568373 ARL3P36405 182 aa13.97□□□□□ -0.17
SMPD3-211ENST00000568373 DEFB112Q30KQ8 113 aa13.97□□□□□ -0.17
SMPD3-211ENST00000568373 IGFL4Q6B9Z1 124 aa13.97□□□□□ -0.17
SMPD3-211ENST00000568373 C8orf49Q96NF6 230 aa13.97□□□□□ -0.17
SMPD3-211ENST00000568373 BEX4Q9NWD9 120 aaPredicted RBP13.97□□□□□ -0.17
SMPD3-211ENST00000568373 U3KQE9 123 aa13.97□□□□□ -0.17
SMPD3-211ENST00000568373 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.96□□□□□ -0.17
SMPD3-211ENST00000568373 IGHV3OR16-13A0A075B7E8 117 aa13.95□□□□□ -0.18
SMPD3-211ENST00000568373 IGHV3-74A0A0B4J1X5 117 aa13.95□□□□□ -0.18
SMPD3-211ENST00000568373 ZNF207O43670 478 aaKnown RBP13.95□□□□□ -0.18
SMPD3-211ENST00000568373 FOXA3P55318 350 aaPredicted RBP13.95□□□□□ -0.18
SMPD3-211ENST00000568373 PAFAH1B2P68402 229 aa13.95□□□□□ -0.18
SMPD3-211ENST00000568373 DEFB113Q30KQ7 82 aa13.95□□□□□ -0.18
SMPD3-211ENST00000568373 LCN12Q6JVE5 192 aa13.95□□□□□ -0.18
SMPD3-211ENST00000568373 COX8CQ7Z4L0 72 aa13.95□□□□□ -0.18
SMPD3-211ENST00000568373 SLC50A1Q9BRV3 221 aa13.95□□□□□ -0.18
SMPD3-211ENST00000568373 PRDM13Q9H4Q3 707 aa13.95□□□□□ -0.18
SMPD3-211ENST00000568373 TRBV12-3P01733 135 aa13.95□□□□□ -0.18
SMPD3-211ENST00000568373 SAPCD1Q5SSQ6 148 aa13.95□□□□□ -0.18
SMPD3-211ENST00000568373 PSMG3-AS1Q96PY0 264 aa13.95□□□□□ -0.18
SMPD3-211ENST00000568373 SSBP4Q9BWG4 385 aaPredicted RBP13.95□□□□□ -0.18
SMPD3-211ENST00000568373 KLK15Q9H2R5 256 aa13.95□□□□□ -0.18
SMPD3-211ENST00000568373 IGHV3-49A0A0A0MS15 119 aa13.94□□□□□ -0.18
SMPD3-211ENST00000568373 ZNF705FA8MVS1 300 aaPredicted RBP13.94□□□□□ -0.18
SMPD3-211ENST00000568373 A8MWP6 167 aa13.94□□□□□ -0.18
SMPD3-211ENST00000568373 IGLV1-40P01703 118 aa13.94□□□□□ -0.18
SMPD3-211ENST00000568373 IGHV4-59P01825 116 aa13.94□□□□□ -0.18
SMPD3-211ENST00000568373 PF4V1P10720 104 aa13.94□□□□□ -0.18
SMPD3-211ENST00000568373 LRRC75A-AS1Q8N1F1 130 aa13.94□□□□□ -0.18
SMPD3-211ENST00000568373 PRR25Q96S07 402 aa13.94□□□□□ -0.18
SMPD3-211ENST00000568373 HECTD1Q9ULT8 2610 aa13.94□□□□□ -0.18
SMPD3-211ENST00000568373 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.94□□□□□ -0.18
SMPD3-211ENST00000568373 LINC00469Q8N7U9 141 aa13.94□□□□□ -0.18
SMPD3-211ENST00000568373 VGLL1Q99990 258 aa13.94□□□□□ -0.18
SMPD3-211ENST00000568373 ZNF580Q9UK33 172 aa13.94□□□□□ -0.18
SMPD3-211ENST00000568373 IGHV4-31P0DP07 118 aa13.93□□□□□ -0.18
SMPD3-211ENST00000568373 CFHR3Q02985 330 aa13.93□□□□□ -0.18
SMPD3-211ENST00000568373 CR1P17927 2039 aa13.93□□□□□ -0.18
SMPD3-211ENST00000568373 NDUFA4O00483 81 aa13.92□□□□□ -0.18
SMPD3-211ENST00000568373 Q5PR19 223 aa13.92□□□□□ -0.18
SMPD3-211ENST00000568373 Q8TAT8 98 aa13.92□□□□□ -0.18
SMPD3-211ENST00000568373 RCHY1Q96PM5 261 aa13.92□□□□□ -0.18
SMPD3-211ENST00000568373 CREBBPQ92793 2442 aa13.92□□□□□ -0.18
SMPD3-211ENST00000568373 LINC00587B1AMM8 73 aa13.92□□□□□ -0.18
SMPD3-211ENST00000568373 HAX1O00165 279 aa13.92□□□□□ -0.18
SMPD3-211ENST00000568373 IGHV3-11P01762 117 aa13.92□□□□□ -0.18
SMPD3-211ENST00000568373 FAM162BQ5T6X4 162 aa13.92□□□□□ -0.18
SMPD3-211ENST00000568373 RNF182Q8N6D2 247 aa13.92□□□□□ -0.18
SMPD3-211ENST00000568373 C18orf32Q8TCD1 76 aa13.92□□□□□ -0.18
SMPD3-211ENST00000568373 APCP25054 2843 aa13.92□□□□□ -0.18
SMPD3-211ENST00000568373 A0A0G2JLM5 398 aa13.91□□□□□ -0.18
SMPD3-211ENST00000568373 SH2D1AO60880 128 aa13.91□□□□□ -0.18
SMPD3-211ENST00000568373 UNQ9165/PRO28630Q6UXU0 137 aa13.91□□□□□ -0.18
SMPD3-211ENST00000568373 SAMD10Q9BYL1 202 aa13.91□□□□□ -0.18
SMPD3-211ENST00000568373 RBAKDNA6NC62 111 aa13.91□□□□□ -0.18
SMPD3-211ENST00000568373 FSHBP01225 129 aa13.91□□□□□ -0.18
SMPD3-211ENST00000568373 C8orf86Q6ZUL3 223 aa13.91□□□□□ -0.18
SMPD3-211ENST00000568373 OR4X2Q8NGF9 303 aa13.91□□□□□ -0.18
SMPD3-211ENST00000568373 KCNS1Q96KK3 526 aa13.91□□□□□ -0.18
SMPD3-211ENST00000568373 ALKBH7Q9BT30 221 aaPredicted RBP13.91□□□□□ -0.18
SMPD3-211ENST00000568373 TRAV8-2A0A0B4J237 113 aa13.9□□□□□ -0.18
SMPD3-211ENST00000568373 A0A1B0GUT8 65 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms