RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 GGACTQ9BVM4 153 aa13.22□□□□□ -0.29
LINC01238-205ENST00000567549 LCN15Q6UWW0 184 aa13.21□□□□□ -0.29
LINC01238-205ENST00000567549 SLC50A1Q9BRV3 221 aa13.21□□□□□ -0.29
LINC01238-205ENST00000567549 M0R2Z0 102 aa13.2□□□□□ -0.3
LINC01238-205ENST00000567549 HIST1H1AQ02539 215 aaPredicted RBP13.2□□□□□ -0.3
LINC01238-205ENST00000567549 RAB31Q13636 194 aa13.2□□□□□ -0.3
LINC01238-205ENST00000567549 PSG3Q16557 428 aa13.2□□□□□ -0.3
LINC01238-205ENST00000567549 TMEM88Q6PEY1 159 aa13.2□□□□□ -0.3
LINC01238-205ENST00000567549 ZNF680Q8NEM1 530 aa13.2□□□□□ -0.3
LINC01238-205ENST00000567549 OR8A1Q8NGG7 326 aa13.2□□□□□ -0.3
LINC01238-205ENST00000567549 C16orf74Q96GX8 76 aa13.2□□□□□ -0.3
LINC01238-205ENST00000567549 LYRM2Q9NU23 88 aaPredicted RBP13.2□□□□□ -0.3
LINC01238-205ENST00000567549 DNAH10Q8IVF4 4471 aa13.19□□□□□ -0.3
LINC01238-205ENST00000567549 ATP5G1P05496 136 aa13.19□□□□□ -0.3
LINC01238-205ENST00000567549 ATP5G3P48201 142 aa13.19□□□□□ -0.3
LINC01238-205ENST00000567549 TAS2R60P59551 318 aa13.19□□□□□ -0.3
LINC01238-205ENST00000567549 BAXQ07812 192 aa13.19□□□□□ -0.3
LINC01238-205ENST00000567549 C1orf134Q5TEV5 83 aa13.19□□□□□ -0.3
LINC01238-205ENST00000567549 TMEM14EPQ6UXP3 125 aa13.19□□□□□ -0.3
LINC01238-205ENST00000567549 ZNF493Q6ZR52 646 aa13.19□□□□□ -0.3
LINC01238-205ENST00000567549 BPIFA4PQ86YQ2 179 aa13.19□□□□□ -0.3
LINC01238-205ENST00000567549 RNF182Q8N6D2 247 aa13.19□□□□□ -0.3
LINC01238-205ENST00000567549 LINC01587Q99440 93 aa13.19□□□□□ -0.3
LINC01238-205ENST00000567549 C20orf144Q9BQM9 153 aa13.19□□□□□ -0.3
LINC01238-205ENST00000567549 HECTD4Q9Y4D8 3996 aa13.19□□□□□ -0.3
LINC01238-205ENST00000567549 TRAV8-2A0A0B4J237 113 aa13.18□□□□□ -0.3
LINC01238-205ENST00000567549 A0A1B0GVY2 172 aa13.18□□□□□ -0.3
LINC01238-205ENST00000567549 ZNF705GA8MUZ8 300 aaPredicted RBP13.18□□□□□ -0.3
LINC01238-205ENST00000567549 METTL15P1P0C7V9 234 aa13.18□□□□□ -0.3
LINC01238-205ENST00000567549 CDKN1BP46527 198 aa13.18□□□□□ -0.3
LINC01238-205ENST00000567549 CAV2P51636 162 aa13.18□□□□□ -0.3
LINC01238-205ENST00000567549 TMEM182Q6ZP80 229 aaPredicted RBP13.18□□□□□ -0.3
LINC01238-205ENST00000567549 ZNF471Q9BX82 626 aaPredicted RBP13.18□□□□□ -0.3
LINC01238-205ENST00000567549 ARV1Q9H2C2 271 aa13.18□□□□□ -0.3
LINC01238-205ENST00000567549 TIMM8BQ9Y5J9 83 aaPredicted RBP13.18□□□□□ -0.3
LINC01238-205ENST00000567549 IGLV2-18A0A075B6J9 118 aa13.17□□□□□ -0.3
LINC01238-205ENST00000567549 RTL8CO15255 209 aa13.17□□□□□ -0.3
LINC01238-205ENST00000567549 COX7A2P2O60397 106 aa13.17□□□□□ -0.3
LINC01238-205ENST00000567549 DEFB130BP0DP73 79 aa13.17□□□□□ -0.3
LINC01238-205ENST00000567549 DEFB130AP0DP74 79 aa13.17□□□□□ -0.3
LINC01238-205ENST00000567549 TPT1P13693 172 aaKnown RBP13.17□□□□□ -0.3
LINC01238-205ENST00000567549 CCL18P55774 89 aa13.17□□□□□ -0.3
LINC01238-205ENST00000567549 NDUFA5Q16718 116 aa13.17□□□□□ -0.3
LINC01238-205ENST00000567549 Q6ZR54 194 aa13.17□□□□□ -0.3
LINC01238-205ENST00000567549 BAP18Q8IXM2 172 aa13.17□□□□□ -0.3
LINC01238-205ENST00000567549 TMEM252Q8N6L7 170 aa13.17□□□□□ -0.3
LINC01238-205ENST00000567549 OR10J6PQ8NGY7 276 aa13.17□□□□□ -0.3
LINC01238-205ENST00000567549 STOML3Q8TAV4 291 aa13.17□□□□□ -0.3
LINC01238-205ENST00000567549 RPUSD4Q96CM3 377 aaKnown RBP13.17□□□□□ -0.3
LINC01238-205ENST00000567549 PHYHIPLQ96FC7 376 aa13.17□□□□□ -0.3
LINC01238-205ENST00000567549 UHRF2Q96PU4 802 aa13.17□□□□□ -0.3
LINC01238-205ENST00000567549 BORCS7-ASMTA0A0B4J1R7 106 aa13.16□□□□□ -0.3
LINC01238-205ENST00000567549 FAM24AA6NFZ4 105 aa13.16□□□□□ -0.3
LINC01238-205ENST00000567549 CBY3A6NI87 242 aa13.16□□□□□ -0.3
LINC01238-205ENST00000567549 F5H768 121 aa13.16□□□□□ -0.3
LINC01238-205ENST00000567549 CRXO43186 299 aaPredicted RBP13.16□□□□□ -0.3
LINC01238-205ENST00000567549 IGFL4Q6B9Z1 124 aa13.16□□□□□ -0.3
LINC01238-205ENST00000567549 EIF5AL1Q6IS14 154 aaKnown RBP13.16□□□□□ -0.3
LINC01238-205ENST00000567549 Q6ZRG5 221 aa13.16□□□□□ -0.3
LINC01238-205ENST00000567549 STX12Q86Y82 276 aa13.16□□□□□ -0.3
LINC01238-205ENST00000567549 CCDC28AQ8IWP9 274 aa13.16□□□□□ -0.3
LINC01238-205ENST00000567549 C17orf77Q96MU5 243 aa13.16□□□□□ -0.3
LINC01238-205ENST00000567549 PXMP4Q9Y6I8 212 aa13.16□□□□□ -0.3
LINC01238-205ENST00000567549 PMS2P5A8MQ11 134 aa13.15□□□□□ -0.3
LINC01238-205ENST00000567549 H7BYZ3 331 aa13.15□□□□□ -0.3
LINC01238-205ENST00000567549 RAB14P61106 215 aa13.15□□□□□ -0.3
LINC01238-205ENST00000567549 LINC00305Q7Z4B0 112 aa13.15□□□□□ -0.3
LINC01238-205ENST00000567549 TMEM263Q8WUH6 116 aaKnown RBP13.15□□□□□ -0.3
LINC01238-205ENST00000567549 CYTL1Q9NRR1 136 aa13.15□□□□□ -0.3
LINC01238-205ENST00000567549 PLA2G2EQ9NZK7 142 aa13.15□□□□□ -0.3
LINC01238-205ENST00000567549 HERC2O95714 4834 aa13.15□□□□□ -0.3
LINC01238-205ENST00000567549 TRAV12-2A0A075B6T6 113 aa13.14□□□□□ -0.31
LINC01238-205ENST00000567549 AGPAT2O15120 278 aa13.14□□□□□ -0.31
LINC01238-205ENST00000567549 SULT1A1P50225 295 aa13.14□□□□□ -0.31
LINC01238-205ENST00000567549 NHLH2Q02577 135 aa13.14□□□□□ -0.31
LINC01238-205ENST00000567549 SLC38A11Q08AI6 406 aa13.14□□□□□ -0.31
LINC01238-205ENST00000567549 GUK1Q16774 197 aa13.14□□□□□ -0.31
LINC01238-205ENST00000567549 IGSF23A1L1A6 192 aa13.13□□□□□ -0.31
LINC01238-205ENST00000567549 HTN1P15515 57 aa13.13□□□□□ -0.31
LINC01238-205ENST00000567549 HBG1P69891 147 aa13.13□□□□□ -0.31
LINC01238-205ENST00000567549 HBG2P69892 147 aa13.13□□□□□ -0.31
LINC01238-205ENST00000567549 ZNF266Q14584 549 aa13.13□□□□□ -0.31
LINC01238-205ENST00000567549 CLINT1Q14677 625 aa13.13□□□□□ -0.31
LINC01238-205ENST00000567549 C10orf113Q5VZT2 155 aa13.13□□□□□ -0.31
LINC01238-205ENST00000567549 OR1L4Q8NGR5 311 aa13.13□□□□□ -0.31
LINC01238-205ENST00000567549 PFDN5Q99471 154 aa13.13□□□□□ -0.31
LINC01238-205ENST00000567549 ZNF331Q9NQX6 463 aaPredicted RBP13.13□□□□□ -0.31
LINC01238-205ENST00000567549 NUDT3O95989 172 aa13.12□□□□□ -0.31
LINC01238-205ENST00000567549 ATP6V1FQ16864 119 aa13.11□□□□□ -0.31
LINC01238-205ENST00000567549 RPL7L1Q6DKI1 246 aaKnown RBP13.11□□□□□ -0.31
LINC01238-205ENST00000567549 SMIM3Q9BZL3 60 aa13.11□□□□□ -0.31
LINC01238-205ENST00000567549 NACAE9PAV3 2078 aa13.11□□□□□ -0.31
LINC01238-205ENST00000567549 SNURFLB1AK76 121 aa13.1□□□□□ -0.31
LINC01238-205ENST00000567549 CST7O76096 145 aa13.1□□□□□ -0.31
LINC01238-205ENST00000567549 LEPP41159 167 aa13.1□□□□□ -0.31
LINC01238-205ENST00000567549 CAMLGP49069 296 aa13.1□□□□□ -0.31
LINC01238-205ENST00000567549 CLLU1Q5K131 121 aa13.1□□□□□ -0.31
LINC01238-205ENST00000567549 PATE2Q6UY27 113 aa13.1□□□□□ -0.31
LINC01238-205ENST00000567549 OR5C1Q8NGR4 320 aa13.1□□□□□ -0.31
LINC01238-205ENST00000567549 KRTAP17-1Q9BYP8 105 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms