RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 COX19Q49B96 90 aa14.72□□□□□ -0.05
SMPD3-203ENST00000563226 PRR31Q5SQ13 230 aa14.72□□□□□ -0.05
SMPD3-203ENST00000563226 C16orf54Q6UWD8 224 aa14.72□□□□□ -0.05
SMPD3-203ENST00000563226 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.72□□□□□ -0.05
SMPD3-203ENST00000563226 BEX4Q9NWD9 120 aaPredicted RBP14.72□□□□□ -0.05
SMPD3-203ENST00000563226 NAV2Q8IVL1 2488 aa14.72□□□□□ -0.05
SMPD3-203ENST00000563226 TENM4Q6N022 2769 aa14.71□□□□□ -0.05
SMPD3-203ENST00000563226 A8MWL6 223 aa14.71□□□□□ -0.05
SMPD3-203ENST00000563226 IGHV3-11P01762 117 aa14.71□□□□□ -0.05
SMPD3-203ENST00000563226 ARL3P36405 182 aa14.71□□□□□ -0.05
SMPD3-203ENST00000563226 APCP25054 2843 aa14.71□□□□□ -0.05
SMPD3-203ENST00000563226 ZNF253O75346 499 aa14.7□□□□□ -0.06
SMPD3-203ENST00000563226 S100A7P31151 101 aa14.7□□□□□ -0.06
SMPD3-203ENST00000563226 OR2D3Q8NGH3 330 aa14.7□□□□□ -0.06
SMPD3-203ENST00000563226 PGLYRP4Q96LB8 373 aa14.7□□□□□ -0.06
SMPD3-203ENST00000563226 METTL26Q96S19 204 aa14.7□□□□□ -0.06
SMPD3-203ENST00000563226 ZNF469Q96JG9 3925 aaPredicted RBP14.7□□□□□ -0.06
SMPD3-203ENST00000563226 A0A087X0K7 114 aa14.7□□□□□ -0.06
SMPD3-203ENST00000563226 A0A1B0GXF2 115 aa14.7□□□□□ -0.06
SMPD3-203ENST00000563226 PF4V1P10720 104 aa14.7□□□□□ -0.06
SMPD3-203ENST00000563226 ATP6V0BQ99437 205 aa14.7□□□□□ -0.06
SMPD3-203ENST00000563226 GSN-AS1Q9NRJ2 163 aa14.7□□□□□ -0.06
SMPD3-203ENST00000563226 APCSP02743 223 aa14.69□□□□□ -0.06
SMPD3-203ENST00000563226 CAMPP49913 170 aa14.69□□□□□ -0.06
SMPD3-203ENST00000563226 RAB9AP51151 201 aa14.69□□□□□ -0.06
SMPD3-203ENST00000563226 RASL11AQ6T310 242 aa14.69□□□□□ -0.06
SMPD3-203ENST00000563226 UNQ9165/PRO28630Q6UXU0 137 aa14.69□□□□□ -0.06
SMPD3-203ENST00000563226 RNF182Q8N6D2 247 aa14.69□□□□□ -0.06
SMPD3-203ENST00000563226 TMEM18Q96B42 140 aa14.69□□□□□ -0.06
SMPD3-203ENST00000563226 VGLL1Q99990 258 aa14.69□□□□□ -0.06
SMPD3-203ENST00000563226 SSBP4Q9BWG4 385 aaPredicted RBP14.69□□□□□ -0.06
SMPD3-203ENST00000563226 U3KQE9 123 aa14.69□□□□□ -0.06
SMPD3-203ENST00000563226 H3BUA1 57 aa14.69□□□□□ -0.06
SMPD3-203ENST00000563226 SERF1AO75920 110 aa14.69□□□□□ -0.06
SMPD3-203ENST00000563226 CFHR3Q02985 330 aa14.69□□□□□ -0.06
SMPD3-203ENST00000563226 Q8TAT8 98 aa14.69□□□□□ -0.06
SMPD3-203ENST00000563226 CHD6Q8TD26 2715 aa14.68□□□□□ -0.06
SMPD3-203ENST00000563226 SERTM2A0A1B0GWG4 89 aa14.68□□□□□ -0.06
SMPD3-203ENST00000563226 BRI3O95415 125 aa14.68□□□□□ -0.06
SMPD3-203ENST00000563226 FSHBP01225 129 aa14.68□□□□□ -0.06
SMPD3-203ENST00000563226 IGLV1-40P01703 118 aa14.68□□□□□ -0.06
SMPD3-203ENST00000563226 SRIP30626 198 aa14.68□□□□□ -0.06
SMPD3-203ENST00000563226 KRTAP1-3Q8IUG1 177 aa14.68□□□□□ -0.06
SMPD3-203ENST00000563226 OR4B1Q8NGF8 309 aa14.68□□□□□ -0.06
SMPD3-203ENST00000563226 Q96MF0 132 aa14.68□□□□□ -0.06
SMPD3-203ENST00000563226 PRAC2D3DTV9 90 aa14.67□□□□□ -0.06
SMPD3-203ENST00000563226 Q0VG73 95 aa14.67□□□□□ -0.06
SMPD3-203ENST00000563226 HIST2H2BCQ6DN03 193 aa14.67□□□□□ -0.06
SMPD3-203ENST00000563226 LCN12Q6JVE5 192 aa14.67□□□□□ -0.06
SMPD3-203ENST00000563226 ATP5L2Q7Z4Y8 100 aa14.67□□□□□ -0.06
SMPD3-203ENST00000563226 LRRC75A-AS1Q8N1F1 130 aa14.67□□□□□ -0.06
SMPD3-203ENST00000563226 GFRA4Q9GZZ7 299 aa14.67□□□□□ -0.06
SMPD3-203ENST00000563226 DOPEY2Q9Y3R5 2298 aa14.67□□□□□ -0.06
SMPD3-203ENST00000563226 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.67□□□□□ -0.06
SMPD3-203ENST00000563226 C1orf194Q5T5A4 169 aa14.67□□□□□ -0.06
SMPD3-203ENST00000563226 RBPMS2Q6ZRY4 209 aaKnown RBP14.67□□□□□ -0.06
SMPD3-203ENST00000563226 BAGE3Q86Y29 109 aa14.67□□□□□ -0.06
SMPD3-203ENST00000563226 USMG5Q96IX5 58 aa14.67□□□□□ -0.06
SMPD3-203ENST00000563226 ARL6IP6Q8N6S5 226 aa14.66□□□□□ -0.06
SMPD3-203ENST00000563226 OR5R1Q8NH85 324 aa14.66□□□□□ -0.06
SMPD3-203ENST00000563226 PRRC2AP48634 2157 aaKnown RBP14.66□□□□□ -0.06
SMPD3-203ENST00000563226 OR4X2Q8NGF9 303 aa14.65□□□□□ -0.06
SMPD3-203ENST00000563226 PRR25Q96S07 402 aa14.65□□□□□ -0.06
SMPD3-203ENST00000563226 TRAV8-2A0A0B4J237 113 aa14.65□□□□□ -0.06
SMPD3-203ENST00000563226 HBBP68871 147 aa14.65□□□□□ -0.06
SMPD3-203ENST00000563226 JOSD1Q15040 202 aaPredicted RBP14.65□□□□□ -0.06
SMPD3-203ENST00000563226 RCHY1Q96PM5 261 aa14.65□□□□□ -0.06
SMPD3-203ENST00000563226 MXRA5Q9NR99 2828 aa14.65□□□□□ -0.06
SMPD3-203ENST00000563226 SMAD7O15105 426 aaKnown RBP14.64□□□□□ -0.07
SMPD3-203ENST00000563226 ESDP10768 282 aa14.64□□□□□ -0.07
SMPD3-203ENST00000563226 ERCC8Q13216 396 aa14.64□□□□□ -0.07
SMPD3-203ENST00000563226 C10orf99Q6UWK7 81 aa14.64□□□□□ -0.07
SMPD3-203ENST00000563226 TEX15Q9BXT5 2789 aa14.64□□□□□ -0.07
SMPD3-203ENST00000563226 FAM231BA6NCW3 169 aa14.64□□□□□ -0.07
SMPD3-203ENST00000563226 NDUFA4O00483 81 aa14.64□□□□□ -0.07
SMPD3-203ENST00000563226 CT45A10P0DMU9 189 aa14.64□□□□□ -0.07
SMPD3-203ENST00000563226 S100A12P80511 92 aa14.64□□□□□ -0.07
SMPD3-203ENST00000563226 C8orf86Q6ZUL3 223 aa14.64□□□□□ -0.07
SMPD3-203ENST00000563226 GLMPQ8WWB7 406 aa14.64□□□□□ -0.07
SMPD3-203ENST00000563226 SH2D1AO60880 128 aa14.63□□□□□ -0.07
SMPD3-203ENST00000563226 ZNF80P51504 273 aaPredicted RBP14.63□□□□□ -0.07
SMPD3-203ENST00000563226 IQCJQ1A5X6 159 aa14.63□□□□□ -0.07
SMPD3-203ENST00000563226 SLC50A1Q9BRV3 221 aa14.63□□□□□ -0.07
SMPD3-203ENST00000563226 KMT2BQ9UMN6 2715 aaPredicted RBP14.63□□□□□ -0.07
SMPD3-203ENST00000563226 OR10J3Q5JRS4 329 aa14.62□□□□□ -0.07
SMPD3-203ENST00000563226 PRDM13Q9H4Q3 707 aa14.62□□□□□ -0.07
SMPD3-203ENST00000563226 CREBBPQ92793 2442 aa14.62□□□□□ -0.07
SMPD3-203ENST00000563226 FOXA3P55318 350 aaPredicted RBP14.62□□□□□ -0.07
SMPD3-203ENST00000563226 COX8CQ7Z4L0 72 aa14.62□□□□□ -0.07
SMPD3-203ENST00000563226 TMSB15BA0A087X1C1 80 aa14.61□□□□□ -0.07
SMPD3-203ENST00000563226 A8MWP6 167 aa14.61□□□□□ -0.07
SMPD3-203ENST00000563226 SAPCD1Q5SSQ6 148 aa14.61□□□□□ -0.07
SMPD3-203ENST00000563226 C18orf32Q8TCD1 76 aa14.61□□□□□ -0.07
SMPD3-203ENST00000563226 ARMS2P0C7Q2 107 aa14.61□□□□□ -0.07
SMPD3-203ENST00000563226 FAM162BQ5T6X4 162 aa14.61□□□□□ -0.07
SMPD3-203ENST00000563226 Q6YL49 198 aa14.61□□□□□ -0.07
SMPD3-203ENST00000563226 C9orf139Q6ZV77 190 aa14.61□□□□□ -0.07
SMPD3-203ENST00000563226 ZNF580Q9UK33 172 aa14.61□□□□□ -0.07
SMPD3-203ENST00000563226 VPREB3Q9UKI3 123 aa14.61□□□□□ -0.07
SMPD3-203ENST00000563226 A0A0G2JLM5 398 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms