RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 ZNF331Q9NQX6 463 aaPredicted RBP16.9■□□□□ 0.3
SYNGR3-202ENST00000562045 CMTM2Q8TAZ6 248 aa16.89■□□□□ 0.29
SYNGR3-202ENST00000562045 HIST1H2BAQ96A08 127 aa16.89■□□□□ 0.29
SYNGR3-202ENST00000562045 C10orf91Q5T1B1 145 aa16.88■□□□□ 0.29
SYNGR3-202ENST00000562045 RPUSD4Q96CM3 377 aaKnown RBP16.88■□□□□ 0.29
SYNGR3-202ENST00000562045 EPDR1Q9UM22 224 aa16.88■□□□□ 0.29
SYNGR3-202ENST00000562045 PARLQ9H300 379 aa16.87■□□□□ 0.29
SYNGR3-202ENST00000562045 MLXQ9UH92 298 aa16.87■□□□□ 0.29
SYNGR3-202ENST00000562045 CARHSP1Q9Y2V2 147 aaKnown RBP16.87■□□□□ 0.29
SYNGR3-202ENST00000562045 IGLV1-51P01701 117 aa16.87■□□□□ 0.29
SYNGR3-202ENST00000562045 DEFA6Q01524 100 aa16.87■□□□□ 0.29
SYNGR3-202ENST00000562045 SAMD13Q5VXD3 122 aa16.87■□□□□ 0.29
SYNGR3-202ENST00000562045 CLEC5AQ9NY25 188 aa16.87■□□□□ 0.29
SYNGR3-202ENST00000562045 PEX7O00628 323 aa16.86■□□□□ 0.29
SYNGR3-202ENST00000562045 INSL3P51460 131 aa16.86■□□□□ 0.29
SYNGR3-202ENST00000562045 FAM74A3Q4VXF1 159 aa16.86■□□□□ 0.29
SYNGR3-202ENST00000562045 C16orf92Q96LL3 132 aa16.86■□□□□ 0.29
SYNGR3-202ENST00000562045 ATG101Q9BSB4 218 aa16.86■□□□□ 0.29
SYNGR3-202ENST00000562045 GPR61Q9BZJ8 451 aa16.86■□□□□ 0.29
SYNGR3-202ENST00000562045 SIGLEC8Q9NYZ4 499 aa16.86■□□□□ 0.29
SYNGR3-202ENST00000562045 IZUMO1RA6ND01 250 aa16.85■□□□□ 0.29
SYNGR3-202ENST00000562045 ZNF674Q2M3X9 581 aa16.85■□□□□ 0.29
SYNGR3-202ENST00000562045 ARL6IP6Q8N6S5 226 aa16.85■□□□□ 0.29
SYNGR3-202ENST00000562045 DYNLRB2Q8TF09 96 aa16.85■□□□□ 0.29
SYNGR3-202ENST00000562045 C2CD4CQ8TF44 421 aa16.85■□□□□ 0.29
SYNGR3-202ENST00000562045 SMIM7Q9BQ49 75 aa16.85■□□□□ 0.29
SYNGR3-202ENST00000562045 IGKV3-7A0A075B6H7 116 aa16.84■□□□□ 0.29
SYNGR3-202ENST00000562045 ZNF727A8MUV8 499 aa16.84■□□□□ 0.29
SYNGR3-202ENST00000562045 APOC3P02656 99 aa16.84■□□□□ 0.29
SYNGR3-202ENST00000562045 TCRAP04437 139 aa16.84■□□□□ 0.29
SYNGR3-202ENST00000562045 CSN1S1P47710 185 aa16.84■□□□□ 0.29
SYNGR3-202ENST00000562045 GNG5P63218 68 aa16.84■□□□□ 0.29
SYNGR3-202ENST00000562045 RPH3ALQ9UNE2 315 aa16.84■□□□□ 0.29
SYNGR3-202ENST00000562045 PRELID1Q9Y255 219 aa16.84■□□□□ 0.29
SYNGR3-202ENST00000562045 PRKDCP78527 4128 aaKnown RBP16.84■□□□□ 0.29
SYNGR3-202ENST00000562045 M0R3E3 92 aa16.84■□□□□ 0.29
SYNGR3-202ENST00000562045 AKR1C3P42330 323 aa16.84■□□□□ 0.29
SYNGR3-202ENST00000562045 NIPSNAP3BQ9BS92 247 aa16.84■□□□□ 0.29
SYNGR3-202ENST00000562045 DERL1Q9BUN8 251 aa16.84■□□□□ 0.29
SYNGR3-202ENST00000562045 AURKAIP1Q9NWT8 199 aaPredicted RBP16.84■□□□□ 0.29
SYNGR3-202ENST00000562045 SORL1Q92673 2214 aa16.83■□□□□ 0.29
SYNGR3-202ENST00000562045 SOCS3O14543 225 aa16.83■□□□□ 0.28
SYNGR3-202ENST00000562045 CNN1P51911 297 aaKnown RBP16.83■□□□□ 0.28
SYNGR3-202ENST00000562045 TRAV8-2A0A0B4J237 113 aa16.82■□□□□ 0.28
SYNGR3-202ENST00000562045 ISLRO14498 428 aa16.82■□□□□ 0.28
SYNGR3-202ENST00000562045 RPL35P42766 123 aaKnown RBP16.82■□□□□ 0.28
SYNGR3-202ENST00000562045 IGFL4Q6B9Z1 124 aa16.82■□□□□ 0.28
SYNGR3-202ENST00000562045 PRR25Q96S07 402 aa16.82■□□□□ 0.28
SYNGR3-202ENST00000562045 MS4A6AQ9H2W1 248 aa16.82■□□□□ 0.28
SYNGR3-202ENST00000562045 PAFAH1B2P68402 229 aa16.82■□□□□ 0.28
SYNGR3-202ENST00000562045 DEFB114Q30KQ6 69 aa16.82■□□□□ 0.28
SYNGR3-202ENST00000562045 CD300EQ496F6 205 aaPredicted RBP16.82■□□□□ 0.28
SYNGR3-202ENST00000562045 DCANP1Q8TF63 244 aa16.82■□□□□ 0.28
SYNGR3-202ENST00000562045 MRPL53Q96EL3 112 aaKnown RBP16.82■□□□□ 0.28
SYNGR3-202ENST00000562045 SERTM2A0A1B0GWG4 89 aa16.81■□□□□ 0.28
SYNGR3-202ENST00000562045 K7EQM0 130 aa16.81■□□□□ 0.28
SYNGR3-202ENST00000562045 DNASE2O00115 360 aaPredicted RBP16.81■□□□□ 0.28
SYNGR3-202ENST00000562045 HLA-DMBP28068 263 aa16.81■□□□□ 0.28
SYNGR3-202ENST00000562045 RBPMS2Q6ZRY4 209 aaKnown RBP16.81■□□□□ 0.28
SYNGR3-202ENST00000562045 SVBPQ8N300 66 aa16.81■□□□□ 0.28
SYNGR3-202ENST00000562045 GBGT1Q8N5D6 347 aa16.81■□□□□ 0.28
SYNGR3-202ENST00000562045 RNF182Q8N6D2 247 aa16.81■□□□□ 0.28
SYNGR3-202ENST00000562045 DIRC3C9JPN6 131 aa16.8■□□□□ 0.28
SYNGR3-202ENST00000562045 ID1P41134 155 aa16.8■□□□□ 0.28
SYNGR3-202ENST00000562045 LCN12Q6JVE5 192 aa16.8■□□□□ 0.28
SYNGR3-202ENST00000562045 GOLT1AQ6ZVE7 132 aa16.8■□□□□ 0.28
SYNGR3-202ENST00000562045 NAT8Q9UHE5 227 aa16.8■□□□□ 0.28
SYNGR3-202ENST00000562045 S100A9P06702 114 aaKnown RBP16.79■□□□□ 0.28
SYNGR3-202ENST00000562045 TAS2R60P59551 318 aa16.79■□□□□ 0.28
SYNGR3-202ENST00000562045 UBE2G1P62253 170 aa16.79■□□□□ 0.28
SYNGR3-202ENST00000562045 PSG3Q16557 428 aa16.79■□□□□ 0.28
SYNGR3-202ENST00000562045 GUCA2BQ16661 112 aa16.79■□□□□ 0.28
SYNGR3-202ENST00000562045 TMEM241Q24JQ0 296 aa16.79■□□□□ 0.28
SYNGR3-202ENST00000562045 FMC1Q96HJ9 113 aa16.79■□□□□ 0.28
SYNGR3-202ENST00000562045 KLF12Q9Y4X4 402 aa16.79■□□□□ 0.28
SYNGR3-202ENST00000562045 C9JCJ5 164 aa16.79■□□□□ 0.28
SYNGR3-202ENST00000562045 TSPAN4O14817 238 aa16.79■□□□□ 0.28
SYNGR3-202ENST00000562045 ZNF256Q9Y2P7 627 aaPredicted RBP16.79■□□□□ 0.28
SYNGR3-202ENST00000562045 TMEM183BQ1AE95 376 aa16.78■□□□□ 0.28
SYNGR3-202ENST00000562045 WFDC3Q8IUB2 231 aa16.78■□□□□ 0.28
SYNGR3-202ENST00000562045 TMEM61Q8N0U2 210 aa16.78■□□□□ 0.28
SYNGR3-202ENST00000562045 TVP23CQ96ET8 276 aa16.78■□□□□ 0.28
SYNGR3-202ENST00000562045 LINC00479Q96M42 142 aa16.78■□□□□ 0.28
SYNGR3-202ENST00000562045 TRBV20OR9-2A0A075B6H5 130 aa16.77■□□□□ 0.28
SYNGR3-202ENST00000562045 TRAV2A0A0B4J234 112 aa16.77■□□□□ 0.28
SYNGR3-202ENST00000562045 TRAV25A0A0B4J276 109 aa16.77■□□□□ 0.28
SYNGR3-202ENST00000562045 ZNF705FA8MVS1 300 aaPredicted RBP16.77■□□□□ 0.28
SYNGR3-202ENST00000562045 K7EIL1 84 aa16.77■□□□□ 0.28
SYNGR3-202ENST00000562045 K7EQG2 157 aa16.77■□□□□ 0.28
SYNGR3-202ENST00000562045 TFPI2P48307 235 aa16.77■□□□□ 0.28
SYNGR3-202ENST00000562045 PNRC1Q12796 327 aaPredicted RBP16.77■□□□□ 0.28
SYNGR3-202ENST00000562045 SDF2L1Q9HCN8 221 aa16.77■□□□□ 0.28
SYNGR3-202ENST00000562045 TRAV34A0A0B4J273 112 aa16.76■□□□□ 0.27
SYNGR3-202ENST00000562045 SNAPINO95295 136 aa16.76■□□□□ 0.27
SYNGR3-202ENST00000562045 GNG4P50150 75 aa16.76■□□□□ 0.27
SYNGR3-202ENST00000562045 CENPWQ5EE01 88 aa16.76■□□□□ 0.27
SYNGR3-202ENST00000562045 TMEM75Q8N9X5 138 aa16.76■□□□□ 0.27
SYNGR3-202ENST00000562045 SNRPD3P62318 126 aaKnown RBP16.76■□□□□ 0.27
SYNGR3-202ENST00000562045 ZNF738Q8NE65 137 aa16.76■□□□□ 0.27
SYNGR3-202ENST00000562045 FBLL1A6NHQ2 334 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms