RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 A0A075B6Q4 140 aa2.23□□□□□ -2.05
HERC1-211ENST00000560983 TRAV8-6A0A0B4J262 113 aa2.23□□□□□ -2.05
HERC1-211ENST00000560983 TRAV26-2A0A0B4J265 109 aa2.23□□□□□ -2.05
HERC1-211ENST00000560983 CORTO00230 105 aa2.23□□□□□ -2.05
HERC1-211ENST00000560983 TAAR5O14804 337 aa2.23□□□□□ -2.05
HERC1-211ENST00000560983 PGLYRP1O75594 196 aaPredicted RBP2.23□□□□□ -2.05
HERC1-211ENST00000560983 ORM1P02763 201 aa2.23□□□□□ -2.05
HERC1-211ENST00000560983 CHTF8P0CG12 524 aa2.23□□□□□ -2.05
HERC1-211ENST00000560983 HIST1H1DP16402 221 aaKnown RBP2.23□□□□□ -2.05
HERC1-211ENST00000560983 DTYMKP23919 212 aa2.23□□□□□ -2.05
HERC1-211ENST00000560983 PSMA1P25786 263 aaKnown RBP2.23□□□□□ -2.05
HERC1-211ENST00000560983 FCGR2CP31995 323 aa2.23□□□□□ -2.05
HERC1-211ENST00000560983 SNCAP37840 140 aa2.23□□□□□ -2.05
HERC1-211ENST00000560983 RND2P52198 227 aa2.23□□□□□ -2.05
HERC1-211ENST00000560983 WNT4P56705 351 aa2.23□□□□□ -2.05
HERC1-211ENST00000560983 RHOBP62745 196 aa2.23□□□□□ -2.05
HERC1-211ENST00000560983 SUPT4H1P63272 117 aaKnown RBP2.23□□□□□ -2.05
HERC1-211ENST00000560983 HIST1H1AQ02539 215 aaPredicted RBP2.23□□□□□ -2.05
HERC1-211ENST00000560983 CATR1Q13166 79 aa2.23□□□□□ -2.05
HERC1-211ENST00000560983 MEF2DQ14814 521 aa2.23□□□□□ -2.05
HERC1-211ENST00000560983 RAB11BQ15907 218 aa2.23□□□□□ -2.05
HERC1-211ENST00000560983 HSD17B12Q53GQ0 312 aa2.23□□□□□ -2.05
HERC1-211ENST00000560983 OR10J3Q5JRS4 329 aa2.23□□□□□ -2.05
HERC1-211ENST00000560983 SAMD13Q5VXD3 122 aa2.23□□□□□ -2.05
HERC1-211ENST00000560983 AQP12AQ8IXF9 295 aa2.23□□□□□ -2.05
HERC1-211ENST00000560983 ZNF664Q8N3J9 261 aa2.23□□□□□ -2.05
HERC1-211ENST00000560983 ZNF555Q8NEP9 628 aa2.23□□□□□ -2.05
HERC1-211ENST00000560983 OR10R2Q8NGX6 335 aa2.23□□□□□ -2.05
HERC1-211ENST00000560983 RHOXF1Q8NHV9 184 aa2.23□□□□□ -2.05
HERC1-211ENST00000560983 SPACA4Q8TDM5 124 aa2.23□□□□□ -2.05
HERC1-211ENST00000560983 C7orf33Q8WU49 177 aa2.23□□□□□ -2.05
HERC1-211ENST00000560983 GTSF1Q8WW33 167 aa2.23□□□□□ -2.05
HERC1-211ENST00000560983 PHYHIPQ92561 330 aa2.23□□□□□ -2.05
HERC1-211ENST00000560983 DPH3Q96FX2 82 aa2.23□□□□□ -2.05
HERC1-211ENST00000560983 RNF185Q96GF1 192 aa2.23□□□□□ -2.05
HERC1-211ENST00000560983 TXNDC17Q9BRA2 123 aa2.23□□□□□ -2.05
HERC1-211ENST00000560983 SLC25A31Q9H0C2 315 aa2.23□□□□□ -2.05
HERC1-211ENST00000560983 IGKV2D-24A0A075B6R9 120 aa2.22□□□□□ -2.05
HERC1-211ENST00000560983 TRAV12-3A0A0B4J271 114 aa2.22□□□□□ -2.05
HERC1-211ENST00000560983 TRGV4A0A0C4DH28 118 aa2.22□□□□□ -2.05
HERC1-211ENST00000560983 MUC21A0A0G2JKD1 596 aa2.22□□□□□ -2.05
HERC1-211ENST00000560983 PNMA8CA0A1B0GUJ8 204 aa2.22□□□□□ -2.05
HERC1-211ENST00000560983 SNTNA6NMZ2 147 aa2.22□□□□□ -2.05
HERC1-211ENST00000560983 SLC17A2O00624 439 aa2.22□□□□□ -2.05
HERC1-211ENST00000560983 SCGB2A1O75556 95 aa2.22□□□□□ -2.05
HERC1-211ENST00000560983 IGKV1-39P01597 117 aa2.22□□□□□ -2.05
HERC1-211ENST00000560983 IGKV1D-39P04432 117 aa2.22□□□□□ -2.05
HERC1-211ENST00000560983 SFTA3P0C7M3 94 aa2.22□□□□□ -2.05
HERC1-211ENST00000560983 PSMB9P28065 219 aa2.22□□□□□ -2.05
HERC1-211ENST00000560983 TALDO1P37837 337 aa2.22□□□□□ -2.05
HERC1-211ENST00000560983 MEOX2P50222 304 aa2.22□□□□□ -2.05
HERC1-211ENST00000560983 SUB1P53999 127 aaKnown RBP eCLIP2.22□□□□□ -2.05
HERC1-211ENST00000560983 ZNF90Q03938 601 aa2.22□□□□□ -2.05
HERC1-211ENST00000560983 KRTAP19-2Q3LHN2 52 aa2.22□□□□□ -2.05
HERC1-211ENST00000560983 AADACL3Q5VUY0 350 aa2.22□□□□□ -2.05
HERC1-211ENST00000560983 HACD4Q5VWC8 232 aa2.22□□□□□ -2.05
HERC1-211ENST00000560983 OR8G2PQ6IF36 304 aa2.22□□□□□ -2.05
HERC1-211ENST00000560983 TMPRSS11AQ6ZMR5 421 aa2.22□□□□□ -2.05
HERC1-211ENST00000560983 CCDC190Q86UF4 302 aa2.22□□□□□ -2.05
HERC1-211ENST00000560983 OR8I2Q8N0Y5 310 aa2.22□□□□□ -2.05
HERC1-211ENST00000560983 CCDC71LQ8N9Z2 235 aa2.22□□□□□ -2.05
HERC1-211ENST00000560983 OR4A16Q8NH70 328 aa2.22□□□□□ -2.05
HERC1-211ENST00000560983 ZNF431Q8TF32 576 aaPredicted RBP2.22□□□□□ -2.05
HERC1-211ENST00000560983 PCNPQ8WW12 178 aaKnown RBP2.22□□□□□ -2.05
HERC1-211ENST00000560983 TRIM63Q969Q1 353 aa2.22□□□□□ -2.05
HERC1-211ENST00000560983 FAM3DQ96BQ1 224 aa2.22□□□□□ -2.05
HERC1-211ENST00000560983 ZC2HC1AQ96GY0 325 aa2.22□□□□□ -2.05
HERC1-211ENST00000560983 SEC22AQ96IW7 307 aa2.22□□□□□ -2.05
HERC1-211ENST00000560983 TSC22D3Q99576 134 aa2.22□□□□□ -2.05
HERC1-211ENST00000560983 SLC5A7Q9GZV3 580 aa2.22□□□□□ -2.05
HERC1-211ENST00000560983 MRPL16Q9NX20 251 aaKnown RBP2.22□□□□□ -2.05
HERC1-211ENST00000560983 PSORS1C1Q9UIG5 152 aa2.22□□□□□ -2.05
HERC1-211ENST00000560983 ANXA10Q9UJ72 324 aa2.22□□□□□ -2.05
HERC1-211ENST00000560983 RAB22AQ9UL26 194 aa2.22□□□□□ -2.05
HERC1-211ENST00000560983 IGKV1D-37A0A075B6S9 117 aa2.21□□□□□ -2.06
HERC1-211ENST00000560983 IGKV1OR2-108A0A075B7D4 117 aa2.21□□□□□ -2.06
HERC1-211ENST00000560983 TCRBV3S1A0A5B6 114 aa2.21□□□□□ -2.06
HERC1-211ENST00000560983 GGTLC3B5MD39 225 aa2.21□□□□□ -2.06
HERC1-211ENST00000560983 SSX5O60225 188 aa2.21□□□□□ -2.06
HERC1-211ENST00000560983 PPYP01298 95 aa2.21□□□□□ -2.06
HERC1-211ENST00000560983 CXCL3P19876 107 aa2.21□□□□□ -2.06
HERC1-211ENST00000560983 NUP62P37198 522 aaPredicted RBP2.21□□□□□ -2.06
HERC1-211ENST00000560983 PPT1P50897 306 aa2.21□□□□□ -2.06
HERC1-211ENST00000560983 TCL1AP56279 114 aa2.21□□□□□ -2.06
HERC1-211ENST00000560983 ATRAIDQ6UW56 229 aa2.21□□□□□ -2.06
HERC1-211ENST00000560983 ARRDC1Q8N5I2 433 aa2.21□□□□□ -2.06
HERC1-211ENST00000560983 SLC35G3Q8N808 338 aa2.21□□□□□ -2.06
HERC1-211ENST00000560983 ZNF738Q8NE65 137 aa2.21□□□□□ -2.06
HERC1-211ENST00000560983 ZNF680Q8NEM1 530 aa2.21□□□□□ -2.06
HERC1-211ENST00000560983 APH1BQ8WW43 257 aa2.21□□□□□ -2.06
HERC1-211ENST00000560983 CCDC124Q96CT7 223 aaKnown RBP2.21□□□□□ -2.06
HERC1-211ENST00000560983 SGK494Q96LW2 274 aa2.21□□□□□ -2.06
HERC1-211ENST00000560983 PBDC1Q9BVG4 233 aa2.21□□□□□ -2.06
HERC1-211ENST00000560983 DAPK2Q9UIK4 370 aa2.21□□□□□ -2.06
HERC1-211ENST00000560983 AK6Q9Y3D8 172 aaKnown RBP2.21□□□□□ -2.06
HERC1-211ENST00000560983 FLGP20930 4061 aaPredicted RBP2.21□□□□□ -2.06
HERC1-211ENST00000560983 LINC00854A0A1B0GVQ3 168 aa2.2□□□□□ -2.06
HERC1-211ENST00000560983 HMGB1P1B2RPK0 211 aaPredicted RBP2.2□□□□□ -2.06
HERC1-211ENST00000560983 BCL2L11O43521 198 aa2.2□□□□□ -2.06
HERC1-211ENST00000560983 WBP4O75554 376 aaKnown RBP2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms