RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 SCRG1O75711 98 aa5.27□□□□□ -1.57
TSPAN3-209ENST00000560715 CSN1S1P47710 185 aa5.27□□□□□ -1.57
TSPAN3-209ENST00000560715 ZNF138P52744 262 aa5.27□□□□□ -1.57
TSPAN3-209ENST00000560715 PIP4P1Q86T03 277 aa5.27□□□□□ -1.57
TSPAN3-209ENST00000560715 SPATA3Q8NHX4 192 aa5.27□□□□□ -1.57
TSPAN3-209ENST00000560715 SPTSSAQ969W0 71 aa5.27□□□□□ -1.57
TSPAN3-209ENST00000560715 SEC16AO15027 2179 aa5.27□□□□□ -1.57
TSPAN3-209ENST00000560715 LAMA1P25391 3075 aa5.27□□□□□ -1.57
TSPAN3-209ENST00000560715 SMIM9A6NGZ8 99 aa5.26□□□□□ -1.57
TSPAN3-209ENST00000560715 GGTLC3B5MD39 225 aa5.26□□□□□ -1.57
TSPAN3-209ENST00000560715 INAFM1C9JVW0 142 aa5.26□□□□□ -1.57
TSPAN3-209ENST00000560715 RBP4P02753 201 aa5.26□□□□□ -1.57
TSPAN3-209ENST00000560715 CD24P25063 80 aa5.26□□□□□ -1.57
TSPAN3-209ENST00000560715 NMUP48645 174 aa5.26□□□□□ -1.57
TSPAN3-209ENST00000560715 ECSCRQ19T08 205 aa5.26□□□□□ -1.57
TSPAN3-209ENST00000560715 CFAP126Q5VTH2 177 aa5.26□□□□□ -1.57
TSPAN3-209ENST00000560715 CEND1Q8N111 149 aa5.26□□□□□ -1.57
TSPAN3-209ENST00000560715 C16orf97H3BN30 126 aa5.26□□□□□ -1.57
TSPAN3-209ENST00000560715 REG3GQ6UW15 175 aa5.26□□□□□ -1.57
TSPAN3-209ENST00000560715 ZNRF1Q8ND25 227 aa5.26□□□□□ -1.57
TSPAN3-209ENST00000560715 PPDPFLQ8WWR9 84 aa5.26□□□□□ -1.57
TSPAN3-209ENST00000560715 CHAC1Q9BUX1 264 aa5.26□□□□□ -1.57
TSPAN3-209ENST00000560715 TMEM126AQ9H061 195 aa5.26□□□□□ -1.57
TSPAN3-209ENST00000560715 TIMM8BQ9Y5J9 83 aaPredicted RBP5.26□□□□□ -1.57
TSPAN3-209ENST00000560715 TMEM262E9PQX1 116 aa5.26□□□□□ -1.57
TSPAN3-209ENST00000560715 IFITM1P13164 125 aa5.26□□□□□ -1.57
TSPAN3-209ENST00000560715 SPINK2P20155 84 aa5.26□□□□□ -1.57
TSPAN3-209ENST00000560715 DSCR4P56555 118 aaPredicted RBP5.26□□□□□ -1.57
TSPAN3-209ENST00000560715 FGF12P61328 243 aa5.26□□□□□ -1.57
TSPAN3-209ENST00000560715 RRN3P1Q2M238 152 aa5.26□□□□□ -1.57
TSPAN3-209ENST00000560715 NSUN5P1Q3KNT7 163 aa5.26□□□□□ -1.57
TSPAN3-209ENST00000560715 OR9G1Q8NH87 305 aa5.26□□□□□ -1.57
TSPAN3-209ENST00000560715 PIFOQ8TCI5 191 aa5.26□□□□□ -1.57
TSPAN3-209ENST00000560715 SLC25A33Q9BSK2 321 aa5.26□□□□□ -1.57
TSPAN3-209ENST00000560715 PRSS22Q9GZN4 317 aa5.26□□□□□ -1.57
TSPAN3-209ENST00000560715 CABIN1Q9Y6J0 2220 aa5.25□□□□□ -1.57
TSPAN3-209ENST00000560715 TRBV20-1A0A075B6N2 111 aa5.25□□□□□ -1.57
TSPAN3-209ENST00000560715 IGHV3-20A0A0C4DH32 117 aa5.25□□□□□ -1.57
TSPAN3-209ENST00000560715 IGHV4-28A0A0C4DH34 117 aa5.25□□□□□ -1.57
TSPAN3-209ENST00000560715 TCTAP57738 103 aa5.25□□□□□ -1.57
TSPAN3-209ENST00000560715 ZNF672Q499Z4 452 aaPredicted RBP5.25□□□□□ -1.57
TSPAN3-209ENST00000560715 SPINK9Q5DT21 86 aa5.25□□□□□ -1.57
TSPAN3-209ENST00000560715 PSMG4Q5JS54 123 aa5.25□□□□□ -1.57
TSPAN3-209ENST00000560715 MIR17HGQ75NE6 70 aa5.25□□□□□ -1.57
TSPAN3-209ENST00000560715 DRAM1Q8N682 238 aa5.25□□□□□ -1.57
TSPAN3-209ENST00000560715 C17orf77Q96MU5 243 aa5.25□□□□□ -1.57
TSPAN3-209ENST00000560715 C5orf49A4QMS7 147 aa5.25□□□□□ -1.57
TSPAN3-209ENST00000560715 CDK2AP2O75956 126 aa5.25□□□□□ -1.57
TSPAN3-209ENST00000560715 MPV17P39210 176 aa5.25□□□□□ -1.57
TSPAN3-209ENST00000560715 RIGQ13278 110 aa5.25□□□□□ -1.57
TSPAN3-209ENST00000560715 C12orf74Q32Q52 190 aa5.25□□□□□ -1.57
TSPAN3-209ENST00000560715 TTC32Q5I0X7 151 aa5.25□□□□□ -1.57
TSPAN3-209ENST00000560715 OR8A1Q8NGG7 326 aa5.25□□□□□ -1.57
TSPAN3-209ENST00000560715 KLK15Q9H2R5 256 aa5.25□□□□□ -1.57
TSPAN3-209ENST00000560715 MYO15AQ9UKN7 3530 aa5.25□□□□□ -1.57
TSPAN3-209ENST00000560715 SMKR1H3BMG3 65 aa5.24□□□□□ -1.57
TSPAN3-209ENST00000560715 ZFAND5O76080 213 aa5.24□□□□□ -1.57
TSPAN3-209ENST00000560715 LTAP01374 205 aa5.24□□□□□ -1.57
TSPAN3-209ENST00000560715 ZNF688P0C7X2 276 aa5.24□□□□□ -1.57
TSPAN3-209ENST00000560715 CRYGSP22914 178 aa5.24□□□□□ -1.57
TSPAN3-209ENST00000560715 COL8A2P25067 703 aa5.24□□□□□ -1.57
TSPAN3-209ENST00000560715 RPL30P62888 115 aaKnown RBP5.24□□□□□ -1.57
TSPAN3-209ENST00000560715 CACNG7P62955 275 aa5.24□□□□□ -1.57
TSPAN3-209ENST00000560715 PRR30Q53SZ7 412 aaPredicted RBP5.24□□□□□ -1.57
TSPAN3-209ENST00000560715 Q6Q795 121 aa5.24□□□□□ -1.57
TSPAN3-209ENST00000560715 RPRMLQ8N4K4 120 aa5.24□□□□□ -1.57
TSPAN3-209ENST00000560715 CARD19Q96LW7 228 aa5.24□□□□□ -1.57
TSPAN3-209ENST00000560715 NTN3O00634 580 aaPredicted RBP5.24□□□□□ -1.57
TSPAN3-209ENST00000560715 MEIG1Q5JSS6 88 aa5.24□□□□□ -1.57
TSPAN3-209ENST00000560715 TMEM78Q5T7P6 136 aa5.24□□□□□ -1.57
TSPAN3-209ENST00000560715 Q6P435 159 aa5.24□□□□□ -1.57
TSPAN3-209ENST00000560715 NABP1Q96AH0 204 aa5.24□□□□□ -1.57
TSPAN3-209ENST00000560715 HSD17B10Q99714 261 aaKnown RBP5.24□□□□□ -1.57
TSPAN3-209ENST00000560715 IGLV3-32A0A0A0MS00 114 aa5.23□□□□□ -1.57
TSPAN3-209ENST00000560715 KRTAP23-1A1A580 65 aa5.23□□□□□ -1.57
TSPAN3-209ENST00000560715 LOXP28300 417 aaPredicted RBP5.23□□□□□ -1.57
TSPAN3-209ENST00000560715 ZNF816Q0VGE8 651 aaPredicted RBP5.23□□□□□ -1.57
TSPAN3-209ENST00000560715 TEN1Q86WV5 123 aa5.23□□□□□ -1.57
TSPAN3-209ENST00000560715 OR4C13Q8NGP0 309 aa5.23□□□□□ -1.57
TSPAN3-209ENST00000560715 ZNF414Q96IQ9 312 aa5.23□□□□□ -1.57
TSPAN3-209ENST00000560715 DNAJC30Q96LL9 226 aa5.23□□□□□ -1.57
TSPAN3-209ENST00000560715 PKIGQ9Y2B9 76 aa5.23□□□□□ -1.57
TSPAN3-209ENST00000560715 A0A096LNJ9 63 aa5.23□□□□□ -1.57
TSPAN3-209ENST00000560715 FAM240AA0A1B0GVK7 77 aa5.23□□□□□ -1.57
TSPAN3-209ENST00000560715 C10orf128Q5T292 105 aa5.23□□□□□ -1.57
TSPAN3-209ENST00000560715 C16orf47Q6ZP98 133 aaPredicted RBP5.23□□□□□ -1.57
TSPAN3-209ENST00000560715 LINC00479Q96M42 142 aa5.23□□□□□ -1.57
TSPAN3-209ENST00000560715 ASCC3Q8N3C0 2202 aaKnown RBP5.23□□□□□ -1.57
TSPAN3-209ENST00000560715 TRBV25-1A0A075B6N4 114 aa5.22□□□□□ -1.57
TSPAN3-209ENST00000560715 EVI2AP22794 236 aa5.22□□□□□ -1.57
TSPAN3-209ENST00000560715 ZNF137PP52743 207 aa5.22□□□□□ -1.57
TSPAN3-209ENST00000560715 REG3AQ06141 175 aa5.22□□□□□ -1.57
TSPAN3-209ENST00000560715 MRPL55Q7Z7F7 128 aaKnown RBP5.22□□□□□ -1.57
TSPAN3-209ENST00000560715 LINC00596Q86U02 117 aa5.22□□□□□ -1.57
TSPAN3-209ENST00000560715 RPP21Q9H633 154 aaKnown RBP5.22□□□□□ -1.57
TSPAN3-209ENST00000560715 SDK1Q7Z5N4 2213 aa5.22□□□□□ -1.57
TSPAN3-209ENST00000560715 SNCGO76070 127 aa5.22□□□□□ -1.57
TSPAN3-209ENST00000560715 EIF4EBP1Q13541 118 aaPredicted RBP5.22□□□□□ -1.57
TSPAN3-209ENST00000560715 PRSS3P2Q8NHM4 247 aa5.22□□□□□ -1.57
TSPAN3-209ENST00000560715 PGLYRP4Q96LB8 373 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms