RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 GDF5OSQ5U4N7 250 aa12.88□□□□□ -0.35
TUBB3-211ENST00000556536 LYPD1Q8N2G4 141 aa12.88□□□□□ -0.35
TUBB3-211ENST00000556536 RPUSD4Q96CM3 377 aaKnown RBP12.88□□□□□ -0.35
TUBB3-211ENST00000556536 AAMDCQ9H7C9 122 aa12.88□□□□□ -0.35
TUBB3-211ENST00000556536 SORL1Q92673 2214 aa12.88□□□□□ -0.35
TUBB3-211ENST00000556536 RYR3Q15413 4870 aa12.87□□□□□ -0.35
TUBB3-211ENST00000556536 PGPA6NDG6 321 aa12.87□□□□□ -0.35
TUBB3-211ENST00000556536 HBE1P02100 147 aa12.87□□□□□ -0.35
TUBB3-211ENST00000556536 IGHV4-30-4P0DP06 118 aa12.87□□□□□ -0.35
TUBB3-211ENST00000556536 ACTL10Q5JWF8 245 aa12.87□□□□□ -0.35
TUBB3-211ENST00000556536 SRD5A3Q9H8P0 318 aa12.87□□□□□ -0.35
TUBB3-211ENST00000556536 OTORQ9NRC9 128 aa12.87□□□□□ -0.35
TUBB3-211ENST00000556536 CLEC5AQ9NY25 188 aa12.87□□□□□ -0.35
TUBB3-211ENST00000556536 FAM74A7A6NL05 159 aa12.86□□□□□ -0.35
TUBB3-211ENST00000556536 GGTLC3B5MD39 225 aa12.86□□□□□ -0.35
TUBB3-211ENST00000556536 ZNF705DP0CH99 300 aaPredicted RBP12.86□□□□□ -0.35
TUBB3-211ENST00000556536 ZNF705BP0CI00 300 aaPredicted RBP12.86□□□□□ -0.35
TUBB3-211ENST00000556536 FOXI2Q6ZQN5 318 aa12.86□□□□□ -0.35
TUBB3-211ENST00000556536 MRPL53Q96EL3 112 aaKnown RBP12.86□□□□□ -0.35
TUBB3-211ENST00000556536 SAV1Q9H4B6 383 aaPredicted RBP12.86□□□□□ -0.35
TUBB3-211ENST00000556536 PRELID1Q9Y255 219 aa12.86□□□□□ -0.35
TUBB3-211ENST00000556536 A0A0J9YX75 114 aa12.85□□□□□ -0.35
TUBB3-211ENST00000556536 A0A1W2PRE2 83 aa12.85□□□□□ -0.35
TUBB3-211ENST00000556536 TEX46H3BTG2 121 aa12.85□□□□□ -0.35
TUBB3-211ENST00000556536 PAGE4O60829 102 aa12.85□□□□□ -0.35
TUBB3-211ENST00000556536 LYPD6BQ8NI32 183 aa12.85□□□□□ -0.35
TUBB3-211ENST00000556536 GNG13Q9P2W3 67 aa12.85□□□□□ -0.35
TUBB3-211ENST00000556536 RBMY1BA6NDE4 496 aaKnown RBP12.84□□□□□ -0.35
TUBB3-211ENST00000556536 RBMY1EA6NEQ0 496 aaKnown RBP12.84□□□□□ -0.35
TUBB3-211ENST00000556536 H3BMM0 161 aa12.84□□□□□ -0.35
TUBB3-211ENST00000556536 RBMY1DP0C7P1 496 aaKnown RBP12.84□□□□□ -0.35
TUBB3-211ENST00000556536 HLA-DRB4P13762 266 aa12.84□□□□□ -0.35
TUBB3-211ENST00000556536 SUMO1P63165 101 aaKnown RBP12.84□□□□□ -0.35
TUBB3-211ENST00000556536 OR8A1Q8NGG7 326 aa12.84□□□□□ -0.35
TUBB3-211ENST00000556536 TUBA4BQ9H853 241 aa12.84□□□□□ -0.35
TUBB3-211ENST00000556536 HLA-DRB4X5D2U9 266 aa12.84□□□□□ -0.35
TUBB3-211ENST00000556536 SLC25A5P05141 298 aaKnown RBP12.83□□□□□ -0.36
TUBB3-211ENST00000556536 NMBP08949 121 aa12.83□□□□□ -0.36
TUBB3-211ENST00000556536 RPL35AP18077 110 aaKnown RBP12.83□□□□□ -0.36
TUBB3-211ENST00000556536 ATP5G3P48201 142 aa12.83□□□□□ -0.36
TUBB3-211ENST00000556536 GNG5P63218 68 aa12.83□□□□□ -0.36
TUBB3-211ENST00000556536 HIST1H1AQ02539 215 aaPredicted RBP12.83□□□□□ -0.36
TUBB3-211ENST00000556536 EBLN2Q6P2I7 272 aa12.83□□□□□ -0.36
TUBB3-211ENST00000556536 STHQ8IWL8 128 aa12.83□□□□□ -0.36
TUBB3-211ENST00000556536 RPH3ALQ9UNE2 315 aa12.83□□□□□ -0.36
TUBB3-211ENST00000556536 IGKV2-40A0A087WW87 121 aaPredicted RBP12.82□□□□□ -0.36
TUBB3-211ENST00000556536 A8MZ25 164 aa12.82□□□□□ -0.36
TUBB3-211ENST00000556536 IGKV2D-40P01614 121 aaPredicted RBP12.82□□□□□ -0.36
TUBB3-211ENST00000556536 IGKV3-20P01619 116 aa12.82□□□□□ -0.36
TUBB3-211ENST00000556536 CSN1S1P47710 185 aa12.82□□□□□ -0.36
TUBB3-211ENST00000556536 PPT1P50897 306 aa12.82□□□□□ -0.36
TUBB3-211ENST00000556536 CNN1P51911 297 aaKnown RBP12.82□□□□□ -0.36
TUBB3-211ENST00000556536 DEFB121Q5J5C9 76 aa12.82□□□□□ -0.36
TUBB3-211ENST00000556536 CST9LP1Q5W188 147 aa12.82□□□□□ -0.36
TUBB3-211ENST00000556536 ZNF767PQ75MW2 155 aa12.82□□□□□ -0.36
TUBB3-211ENST00000556536 TRPT1Q86TN4 253 aaKnown RBP12.82□□□□□ -0.36
TUBB3-211ENST00000556536 CMTM2Q8TAZ6 248 aa12.82□□□□□ -0.36
TUBB3-211ENST00000556536 ARL2-SNX15V9GYD0 113 aa12.82□□□□□ -0.36
TUBB3-211ENST00000556536 DIRC3C9JPN6 131 aa12.81□□□□□ -0.36
TUBB3-211ENST00000556536 FRMD6-AS1P0C7T7 363 aa12.81□□□□□ -0.36
TUBB3-211ENST00000556536 ERCC8Q13216 396 aa12.81□□□□□ -0.36
TUBB3-211ENST00000556536 PMS2P11Q13670 270 aa12.81□□□□□ -0.36
TUBB3-211ENST00000556536 LINC00322Q6ZN03 302 aaPredicted RBP12.81□□□□□ -0.36
TUBB3-211ENST00000556536 CCDC28AQ8IWP9 274 aa12.81□□□□□ -0.36
TUBB3-211ENST00000556536 C5orf17Q8NAS9 161 aa12.81□□□□□ -0.36
TUBB3-211ENST00000556536 OR4B1Q8NGF8 309 aa12.81□□□□□ -0.36
TUBB3-211ENST00000556536 MRAPQ8TCY5 172 aa12.81□□□□□ -0.36
TUBB3-211ENST00000556536 RXFP4Q8TDU9 374 aa12.81□□□□□ -0.36
TUBB3-211ENST00000556536 MANBALQ9NQG1 85 aa12.81□□□□□ -0.36
TUBB3-211ENST00000556536 EPDR1Q9UM22 224 aa12.81□□□□□ -0.36
TUBB3-211ENST00000556536 HAGHQ16775 308 aa12.8□□□□□ -0.36
TUBB3-211ENST00000556536 OR10J6PQ8NGY7 276 aa12.8□□□□□ -0.36
TUBB3-211ENST00000556536 VGLL1Q99990 258 aa12.8□□□□□ -0.36
TUBB3-211ENST00000556536 NKX6-2Q9C056 277 aaPredicted RBP12.8□□□□□ -0.36
TUBB3-211ENST00000556536 LOC102724200A0A096LPH7 203 aaPredicted RBP12.79□□□□□ -0.36
TUBB3-211ENST00000556536 A8MTW9 85 aa12.79□□□□□ -0.36
TUBB3-211ENST00000556536 NPIPB6E9PJ23 425 aa12.79□□□□□ -0.36
TUBB3-211ENST00000556536 DUSP14O95147 198 aaKnown RBP12.79□□□□□ -0.36
TUBB3-211ENST00000556536 TCRAP04437 139 aa12.79□□□□□ -0.36
TUBB3-211ENST00000556536 GOLT1AQ6ZVE7 132 aa12.79□□□□□ -0.36
TUBB3-211ENST00000556536 ARL6IP6Q8N6S5 226 aa12.79□□□□□ -0.36
TUBB3-211ENST00000556536 AGPAT4-IT1Q9H0P7 198 aa12.79□□□□□ -0.36
TUBB3-211ENST00000556536 C11orf94C9JXX5 98 aa12.78□□□□□ -0.36
TUBB3-211ENST00000556536 IFNA1P01562 189 aa12.78□□□□□ -0.36
TUBB3-211ENST00000556536 CT45A10P0DMU9 189 aa12.78□□□□□ -0.36
TUBB3-211ENST00000556536 BCL2P10415 239 aa12.78□□□□□ -0.36
TUBB3-211ENST00000556536 AMTNQ6UX39 209 aa12.78□□□□□ -0.36
TUBB3-211ENST00000556536 RARRES2Q99969 163 aa12.78□□□□□ -0.36
TUBB3-211ENST00000556536 LOC102723971A0A1B0GUV8 181 aa12.77□□□□□ -0.37
TUBB3-211ENST00000556536 PEX7O00628 323 aa12.77□□□□□ -0.37
TUBB3-211ENST00000556536 FXYD7P58549 80 aa12.77□□□□□ -0.37
TUBB3-211ENST00000556536 RAB14P61106 215 aa12.77□□□□□ -0.37
TUBB3-211ENST00000556536 C9orf47Q6ZRZ4 202 aa12.77□□□□□ -0.37
TUBB3-211ENST00000556536 LINC00479Q96M42 142 aa12.77□□□□□ -0.37
TUBB3-211ENST00000556536 CLUHP3Q96NS8 147 aa12.77□□□□□ -0.37
TUBB3-211ENST00000556536 ASCL2Q99929 193 aa12.77□□□□□ -0.37
TUBB3-211ENST00000556536 SLC35B3Q9H1N7 401 aa12.77□□□□□ -0.37
TUBB3-211ENST00000556536 TRAV8-1A0A0A6YYK1 113 aa12.76□□□□□ -0.37
TUBB3-211ENST00000556536 RBAKDNA6NC62 111 aa12.76□□□□□ -0.37
TUBB3-211ENST00000556536 RBFOX3A6NFN3 312 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms