RNA–Protein interactions for RNA: ENST00000556020.1

GPHN-211, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 562 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-211ENST00000556020 VWC2Q2TAL6 325 aa12.15□□□□□ -0.46
GPHN-211ENST00000556020 PLAC8L1A1L4L8 177 aa12.14□□□□□ -0.47
GPHN-211ENST00000556020 F5H768 121 aa12.14□□□□□ -0.47
GPHN-211ENST00000556020 RPL29P47914 159 aaKnown RBP12.14□□□□□ -0.47
GPHN-211ENST00000556020 LINC00299Q6ZSB3 139 aa12.14□□□□□ -0.47
GPHN-211ENST00000556020 C16orf74Q96GX8 76 aa12.14□□□□□ -0.47
GPHN-211ENST00000556020 LRRC37A5PQ49AS3 106 aa12.13□□□□□ -0.47
GPHN-211ENST00000556020 SAT2Q96F10 170 aaPredicted RBP12.13□□□□□ -0.47
GPHN-211ENST00000556020 ZNF586Q9NXT0 402 aa12.13□□□□□ -0.47
GPHN-211ENST00000556020 UPK1BO75841 260 aa12.12□□□□□ -0.47
GPHN-211ENST00000556020 GUK1Q16774 197 aa12.12□□□□□ -0.47
GPHN-211ENST00000556020 ATP6V1FQ16864 119 aa12.12□□□□□ -0.47
GPHN-211ENST00000556020 GFI1BQ5VTD9 330 aa12.12□□□□□ -0.47
GPHN-211ENST00000556020 LINC00336Q6ZUF6 198 aa12.12□□□□□ -0.47
GPHN-211ENST00000556020 THAP6Q8TBB0 222 aa12.12□□□□□ -0.47
GPHN-211ENST00000556020 NOP10Q9NPE3 64 aaKnown RBP12.12□□□□□ -0.47
GPHN-211ENST00000556020 NACAE9PAV3 2078 aa12.12□□□□□ -0.47
GPHN-211ENST00000556020 DNAH2Q9P225 4427 aa12.11□□□□□ -0.47
GPHN-211ENST00000556020 DNAH17Q9UFH2 4485 aa12.11□□□□□ -0.47
GPHN-211ENST00000556020 H7BYZ3 331 aa12.11□□□□□ -0.47
GPHN-211ENST00000556020 ATP5G1P05496 136 aa12.11□□□□□ -0.47
GPHN-211ENST00000556020 ATP5G3P48201 142 aa12.11□□□□□ -0.47
GPHN-211ENST00000556020 NHLH2Q02577 135 aa12.11□□□□□ -0.47
GPHN-211ENST00000556020 GCSAMLQ5JQS6 135 aa12.11□□□□□ -0.47
GPHN-211ENST00000556020 NPCDR1Q9BY65 106 aa12.11□□□□□ -0.47
GPHN-211ENST00000556020 TIMM8BQ9Y5J9 83 aaPredicted RBP12.11□□□□□ -0.47
GPHN-211ENST00000556020 PRSS29PA6NIE9 313 aa12.1□□□□□ -0.47
GPHN-211ENST00000556020 NUDT3O95989 172 aa12.1□□□□□ -0.47
GPHN-211ENST00000556020 RLN2P04090 185 aa12.1□□□□□ -0.47
GPHN-211ENST00000556020 CT45A10P0DMU9 189 aa12.1□□□□□ -0.47
GPHN-211ENST00000556020 PYYP10082 97 aa12.1□□□□□ -0.47
GPHN-211ENST00000556020 IFITM3Q01628 133 aa12.1□□□□□ -0.47
GPHN-211ENST00000556020 CLINT1Q14677 625 aa12.1□□□□□ -0.47
GPHN-211ENST00000556020 RNF212Q495C1 297 aa12.1□□□□□ -0.47
GPHN-211ENST00000556020 C15orf53Q8NAA6 179 aa12.1□□□□□ -0.47
GPHN-211ENST00000556020 OR5C1Q8NGR4 320 aa12.1□□□□□ -0.47
GPHN-211ENST00000556020 TMEM263Q8WUH6 116 aaKnown RBP12.1□□□□□ -0.47
GPHN-211ENST00000556020 BLNKQ8WV28 456 aa12.1□□□□□ -0.47
GPHN-211ENST00000556020 ATG101Q9BSB4 218 aa12.1□□□□□ -0.47
GPHN-211ENST00000556020 OR5AC2Q9NZP5 309 aa12.1□□□□□ -0.47
GPHN-211ENST00000556020 TIMM9Q9Y5J7 89 aa12.1□□□□□ -0.47
GPHN-211ENST00000556020 TRBV19A0A075B6N1 114 aa12.09□□□□□ -0.47
GPHN-211ENST00000556020 TRAV12-3A0A0B4J271 114 aa12.09□□□□□ -0.47
GPHN-211ENST00000556020 CBY3A6NI87 242 aa12.09□□□□□ -0.47
GPHN-211ENST00000556020 NPIPB6E9PJ23 425 aa12.09□□□□□ -0.47
GPHN-211ENST00000556020 M0R3E3 92 aa12.09□□□□□ -0.47
GPHN-211ENST00000556020 RTL8CO15255 209 aa12.09□□□□□ -0.47
GPHN-211ENST00000556020 MPDU1O75352 247 aa12.09□□□□□ -0.47
GPHN-211ENST00000556020 LEPP41159 167 aa12.09□□□□□ -0.47
GPHN-211ENST00000556020 LGALS9BQ3B8N2 356 aa12.09□□□□□ -0.47
GPHN-211ENST00000556020 ZNF493Q6ZR52 646 aa12.09□□□□□ -0.47
GPHN-211ENST00000556020 CCDC28AQ8IWP9 274 aa12.09□□□□□ -0.47
GPHN-211ENST00000556020 RNASE8Q8TDE3 154 aaKnown RBP12.09□□□□□ -0.47
GPHN-211ENST00000556020 C20orf144Q9BQM9 153 aa12.09□□□□□ -0.47
GPHN-211ENST00000556020 SLC25A31Q9H0C2 315 aa12.09□□□□□ -0.47
GPHN-211ENST00000556020 E5RGE8 158 aa12.08□□□□□ -0.48
GPHN-211ENST00000556020 INMT-MINDY4F8WBC2 141 aa12.08□□□□□ -0.48
GPHN-211ENST00000556020 ERCC8Q13216 396 aa12.08□□□□□ -0.48
GPHN-211ENST00000556020 CHAC2Q8WUX2 184 aa12.08□□□□□ -0.48
GPHN-211ENST00000556020 NMES1Q9C002 83 aa12.08□□□□□ -0.48
GPHN-211ENST00000556020 TMEM14CQ9P0S9 112 aa12.08□□□□□ -0.48
GPHN-211ENST00000556020 A6NHS1 94 aa12.07□□□□□ -0.48
GPHN-211ENST00000556020 ZNF253O75346 499 aa12.07□□□□□ -0.48
GPHN-211ENST00000556020 NDUFB4O95168 129 aa12.07□□□□□ -0.48
GPHN-211ENST00000556020 HIST1H1EP10412 219 aaKnown RBP12.07□□□□□ -0.48
GPHN-211ENST00000556020 MIR17HGQ75NE6 70 aa12.07□□□□□ -0.48
GPHN-211ENST00000556020 EXOC3-AS1Q8N2X6 119 aa12.07□□□□□ -0.48
GPHN-211ENST00000556020 SLC25A2Q9BXI2 301 aa12.07□□□□□ -0.48
GPHN-211ENST00000556020 PTTG2Q9NZH5 202 aa12.07□□□□□ -0.48
GPHN-211ENST00000556020 FAT2Q9NYQ8 4349 aa12.07□□□□□ -0.48
GPHN-211ENST00000556020 GAGE12BA1L429 117 aa12.06□□□□□ -0.48
GPHN-211ENST00000556020 SNURFLB1AK76 121 aa12.06□□□□□ -0.48
GPHN-211ENST00000556020 H0YIZ8 118 aa12.06□□□□□ -0.48
GPHN-211ENST00000556020 PRAF2O60831 178 aa12.06□□□□□ -0.48
GPHN-211ENST00000556020 GAGE7O76087 117 aa12.06□□□□□ -0.48
GPHN-211ENST00000556020 GAGE12FP0CL80 117 aa12.06□□□□□ -0.48
GPHN-211ENST00000556020 GAGE12GP0CL81 117 aa12.06□□□□□ -0.48
GPHN-211ENST00000556020 GAGE12IP0CL82 117 aa12.06□□□□□ -0.48
GPHN-211ENST00000556020 OR5I1Q13606 314 aa12.06□□□□□ -0.48
GPHN-211ENST00000556020 Q6ZR54 194 aa12.06□□□□□ -0.48
GPHN-211ENST00000556020 ODF3Q96PU9 254 aa12.06□□□□□ -0.48
GPHN-211ENST00000556020 A0A1B0GVY2 172 aa12.05□□□□□ -0.48
GPHN-211ENST00000556020 ICAM4Q14773 271 aa12.05□□□□□ -0.48
GPHN-211ENST00000556020 RNF141Q8WVD5 230 aa12.05□□□□□ -0.48
GPHN-211ENST00000556020 MRPL53Q96EL3 112 aaKnown RBP12.05□□□□□ -0.48
GPHN-211ENST00000556020 AAMDCQ9H7C9 122 aa12.05□□□□□ -0.48
GPHN-211ENST00000556020 HERC2O95714 4834 aa12.05□□□□□ -0.48
GPHN-211ENST00000556020 SSNA1O43805 119 aa12.04□□□□□ -0.48
GPHN-211ENST00000556020 CYCSP99999 105 aaKnown RBP12.04□□□□□ -0.48
GPHN-211ENST00000556020 FAM122CQ6P4D5 195 aa12.04□□□□□ -0.48
GPHN-211ENST00000556020 WDR61Q9GZS3 305 aaKnown RBP12.04□□□□□ -0.48
GPHN-211ENST00000556020 PRELID1Q9Y255 219 aa12.04□□□□□ -0.48
GPHN-211ENST00000556020 IGKV2-40A0A087WW87 121 aaPredicted RBP12.03□□□□□ -0.48
GPHN-211ENST00000556020 C7orf71A4D174 169 aa12.03□□□□□ -0.48
GPHN-211ENST00000556020 IGKV2D-40P01614 121 aaPredicted RBP12.03□□□□□ -0.48
GPHN-211ENST00000556020 SLC25A5P05141 298 aaKnown RBP12.03□□□□□ -0.48
GPHN-211ENST00000556020 OR10J4P0C629 311 aa12.03□□□□□ -0.48
GPHN-211ENST00000556020 RNASE4P34096 147 aaKnown RBP12.03□□□□□ -0.48
GPHN-211ENST00000556020 H2BFSP57053 126 aa12.03□□□□□ -0.48
GPHN-211ENST00000556020 BTN1A1Q13410 526 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms