RNA–Protein interactions for RNA: ENST00000554308.5

PPP4R3A-201, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-201ENST00000554308 CSN3P07498 182 aa11.51□□□□□ -0.57
PPP4R3A-201ENST00000554308 COL8A1P27658 744 aa11.51□□□□□ -0.57
PPP4R3A-201ENST00000554308 NDPQ00604 133 aa11.51□□□□□ -0.57
PPP4R3A-201ENST00000554308 CIARTQ8N365 385 aaPredicted RBP11.51□□□□□ -0.57
PPP4R3A-201ENST00000554308 CSPG4Q6UVK1 2322 aa11.51□□□□□ -0.57
PPP4R3A-201ENST00000554308 C19orf71A6NCJ1 209 aa11.5□□□□□ -0.57
PPP4R3A-201ENST00000554308 OOSP1A8MZH6 123 aa11.5□□□□□ -0.57
PPP4R3A-201ENST00000554308 NPFFO15130 113 aa11.5□□□□□ -0.57
PPP4R3A-201ENST00000554308 CRXO43186 299 aaPredicted RBP11.5□□□□□ -0.57
PPP4R3A-201ENST00000554308 BVES-AS1Q5T3Y7 98 aa11.5□□□□□ -0.57
PPP4R3A-201ENST00000554308 ZNF562Q6V9R5 426 aa11.5□□□□□ -0.57
PPP4R3A-201ENST00000554308 PVRIGQ6DKI7 326 aa11.5□□□□□ -0.57
PPP4R3A-201ENST00000554308 ARPC1AQ92747 370 aa11.5□□□□□ -0.57
PPP4R3A-201ENST00000554308 ST20Q9HBF5 79 aa11.5□□□□□ -0.57
PPP4R3A-201ENST00000554308 A0A087X0K7 114 aa11.49□□□□□ -0.57
PPP4R3A-201ENST00000554308 A8MWL6 223 aa11.49□□□□□ -0.57
PPP4R3A-201ENST00000554308 I3L2K1 104 aa11.49□□□□□ -0.57
PPP4R3A-201ENST00000554308 LTAP01374 205 aa11.49□□□□□ -0.57
PPP4R3A-201ENST00000554308 COX6B1P14854 86 aa11.49□□□□□ -0.57
PPP4R3A-201ENST00000554308 Q9H3A6 140 aa11.49□□□□□ -0.57
PPP4R3A-201ENST00000554308 APCP25054 2843 aa11.49□□□□□ -0.57
PPP4R3A-201ENST00000554308 LOC102724200A0A096LPH7 203 aaPredicted RBP11.49□□□□□ -0.57
PPP4R3A-201ENST00000554308 SNAI2O43623 268 aa11.49□□□□□ -0.57
PPP4R3A-201ENST00000554308 GOSR1O95249 250 aa11.49□□□□□ -0.57
PPP4R3A-201ENST00000554308 TCRAP04437 139 aa11.49□□□□□ -0.57
PPP4R3A-201ENST00000554308 PSG1P11464 419 aa11.49□□□□□ -0.57
PPP4R3A-201ENST00000554308 GP9P14770 177 aa11.49□□□□□ -0.57
PPP4R3A-201ENST00000554308 CDKN1BP46527 198 aa11.49□□□□□ -0.57
PPP4R3A-201ENST00000554308 Q8N6K4 173 aa11.49□□□□□ -0.57
PPP4R3A-201ENST00000554308 TMUB1Q9BVT8 246 aa11.49□□□□□ -0.57
PPP4R3A-201ENST00000554308 TRAV40A0A0B4J280 105 aa11.48□□□□□ -0.57
PPP4R3A-201ENST00000554308 ANKRD39Q53RE8 183 aa11.48□□□□□ -0.57
PPP4R3A-201ENST00000554308 SLC25A34Q6PIV7 304 aa11.48□□□□□ -0.57
PPP4R3A-201ENST00000554308 NDUFS8O00217 210 aa11.48□□□□□ -0.57
PPP4R3A-201ENST00000554308 PAX8Q06710 450 aa11.48□□□□□ -0.57
PPP4R3A-201ENST00000554308 EBI3Q14213 229 aa11.48□□□□□ -0.57
PPP4R3A-201ENST00000554308 RBPMS2Q6ZRY4 209 aaKnown RBP11.48□□□□□ -0.57
PPP4R3A-201ENST00000554308 EXOC3-AS1Q8N2X6 119 aa11.48□□□□□ -0.57
PPP4R3A-201ENST00000554308 CHCHD1Q96BP2 118 aaKnown RBP11.48□□□□□ -0.57
PPP4R3A-201ENST00000554308 K7EIM0 57 aa11.47□□□□□ -0.57
PPP4R3A-201ENST00000554308 CHEK1O14757 476 aa11.47□□□□□ -0.57
PPP4R3A-201ENST00000554308 AMMECR1LQ6DCA0 310 aa11.47□□□□□ -0.57
PPP4R3A-201ENST00000554308 TMEM219Q86XT9 240 aa11.47□□□□□ -0.57
PPP4R3A-201ENST00000554308 Q8N9W7 124 aa11.47□□□□□ -0.57
PPP4R3A-201ENST00000554308 TRGV9Q99603 122 aa11.47□□□□□ -0.57
PPP4R3A-201ENST00000554308 SCRT2Q9NQ03 307 aa11.47□□□□□ -0.57
PPP4R3A-201ENST00000554308 MXRA5Q9NR99 2828 aa11.47□□□□□ -0.57
PPP4R3A-201ENST00000554308 TRAV30A0A087WSZ9 112 aa11.47□□□□□ -0.57
PPP4R3A-201ENST00000554308 C5orf17Q8NAS9 161 aa11.47□□□□□ -0.57
PPP4R3A-201ENST00000554308 DAZAP1Q96EP5 407 aaKnown RBP11.47□□□□□ -0.57
PPP4R3A-201ENST00000554308 RASL11BQ9BPW5 248 aa11.47□□□□□ -0.57
PPP4R3A-201ENST00000554308 C1RLQ9NZP8 487 aa11.47□□□□□ -0.57
PPP4R3A-201ENST00000554308 SOX21Q9Y651 276 aaPredicted RBP11.47□□□□□ -0.57
PPP4R3A-201ENST00000554308 IGHV7-81A0A0B4J1V7 117 aa11.46□□□□□ -0.57
PPP4R3A-201ENST00000554308 ZNF785A8K8V0 405 aa11.46□□□□□ -0.57
PPP4R3A-201ENST00000554308 IGHV3-23P01764 117 aa11.46□□□□□ -0.57
PPP4R3A-201ENST00000554308 APOHP02749 345 aaPredicted RBP11.46□□□□□ -0.57
PPP4R3A-201ENST00000554308 IGLC1P0CG04 106 aa11.46□□□□□ -0.57
PPP4R3A-201ENST00000554308 LYZP61626 148 aa11.46□□□□□ -0.57
PPP4R3A-201ENST00000554308 PRNTQ86SH4 94 aa11.46□□□□□ -0.57
PPP4R3A-201ENST00000554308 FMC1Q96HJ9 113 aa11.46□□□□□ -0.57
PPP4R3A-201ENST00000554308 SRSF8Q9BRL6 282 aaKnown RBP11.46□□□□□ -0.57
PPP4R3A-201ENST00000554308 NCR2O95944 276 aa11.46□□□□□ -0.58
PPP4R3A-201ENST00000554308 IGHV4-38-2P0DP08 117 aa11.46□□□□□ -0.58
PPP4R3A-201ENST00000554308 GOLT1AQ6ZVE7 132 aa11.46□□□□□ -0.58
PPP4R3A-201ENST00000554308 Q86TA4 180 aa11.46□□□□□ -0.58
PPP4R3A-201ENST00000554308 MAPK1IP1LQ8NDC0 245 aa11.46□□□□□ -0.58
PPP4R3A-201ENST00000554308 TMEM191AQ9H0A3 160 aa11.46□□□□□ -0.58
PPP4R3A-201ENST00000554308 ZNF492Q9P255 531 aa11.46□□□□□ -0.58
PPP4R3A-201ENST00000554308 SELENOKQ9Y6D0 94 aa11.46□□□□□ -0.58
PPP4R3A-201ENST00000554308 TEX15Q9BXT5 2789 aa11.45□□□□□ -0.58
PPP4R3A-201ENST00000554308 DEFB125Q8N687 156 aa11.45□□□□□ -0.58
PPP4R3A-201ENST00000554308 FANCD2OSQ96PS1 177 aa11.45□□□□□ -0.58
PPP4R3A-201ENST00000554308 MAP1LC3CQ9BXW4 147 aa11.45□□□□□ -0.58
PPP4R3A-201ENST00000554308 IGKV1-17P01599 117 aa11.45□□□□□ -0.58
PPP4R3A-201ENST00000554308 IGLV2-11P01706 119 aa11.45□□□□□ -0.58
PPP4R3A-201ENST00000554308 TCTAP57738 103 aa11.45□□□□□ -0.58
PPP4R3A-201ENST00000554308 RHOGP84095 191 aa11.45□□□□□ -0.58
PPP4R3A-201ENST00000554308 CT83Q5H943 113 aa11.45□□□□□ -0.58
PPP4R3A-201ENST00000554308 STXBP6Q8NFX7 210 aa11.45□□□□□ -0.58
PPP4R3A-201ENST00000554308 IGHV1-69DA0A0B4J2H0 117 aa11.44□□□□□ -0.58
PPP4R3A-201ENST00000554308 LINC01548A6NM66 108 aa11.44□□□□□ -0.58
PPP4R3A-201ENST00000554308 HSBP1L1C9JCN9 74 aa11.44□□□□□ -0.58
PPP4R3A-201ENST00000554308 IGHV1-69P01742 117 aa11.44□□□□□ -0.58
PPP4R3A-201ENST00000554308 MSMBP08118 114 aa11.44□□□□□ -0.58
PPP4R3A-201ENST00000554308 ARMS2P0C7Q2 107 aa11.44□□□□□ -0.58
PPP4R3A-201ENST00000554308 EGR2P11161 476 aaPredicted RBP11.44□□□□□ -0.58
PPP4R3A-201ENST00000554308 ECSCRQ19T08 205 aa11.44□□□□□ -0.58
PPP4R3A-201ENST00000554308 SAPCD1Q5SSQ6 148 aa11.44□□□□□ -0.58
PPP4R3A-201ENST00000554308 NDFIP1Q9BT67 221 aa11.44□□□□□ -0.58
PPP4R3A-201ENST00000554308 HIF1ANQ9NWT6 349 aa11.44□□□□□ -0.58
PPP4R3A-201ENST00000554308 KRTAP10-9P60411 292 aa11.44□□□□□ -0.58
PPP4R3A-201ENST00000554308 FAM106AQ4KMX7 169 aa11.44□□□□□ -0.58
PPP4R3A-201ENST00000554308 SMIM12Q96EX1 92 aa11.44□□□□□ -0.58
PPP4R3A-201ENST00000554308 C17orf77Q96MU5 243 aa11.44□□□□□ -0.58
PPP4R3A-201ENST00000554308 CST9LQ9H4G1 147 aa11.44□□□□□ -0.58
PPP4R3A-201ENST00000554308 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.43□□□□□ -0.58
PPP4R3A-201ENST00000554308 TRAV8-6A0A0B4J262 113 aa11.43□□□□□ -0.58
PPP4R3A-201ENST00000554308 PSG9Q00887 426 aa11.43□□□□□ -0.58
PPP4R3A-201ENST00000554308 FAM162BQ5T6X4 162 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms